Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_pT_P05
         (833 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0807 + 6323885-6324264,6324369-6324542,6324636-6324746,632...    29   4.6  
09_06_0113 + 20938357-20938730,20938820-20939057,20939140-209392...    28   8.0  
08_01_0114 - 900530-901191,901269-901338,901536-901640,901721-90...    28   8.0  

>07_01_0807 +
           6323885-6324264,6324369-6324542,6324636-6324746,
           6324813-6324906
          Length = 252

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +3

Query: 357 FLEFNLFTCTRNISTNVKVKTTKCSLPFSYINAFSFNTGKG 479
           FL FNL  CT N+  ++  K +     F  I++F  + G G
Sbjct: 190 FLLFNLEACTVNVYDSMDKKESMFDKVFELIDSFKLHVGLG 230


>09_06_0113 +
           20938357-20938730,20938820-20939057,20939140-20939264,
           20939682-20939715,20939804-20939850,20939948-20940079,
           20940420-20940484,20940613-20940685,20940790-20940946
          Length = 414

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +3

Query: 246 KGNLSISNRKYDHGKTTIKGGNYKSVS 326
           K + S S++KY  G+  +KGGN+K  S
Sbjct: 253 KFHSSKSSQKYSTGRVELKGGNFKFAS 279


>08_01_0114 - 900530-901191,901269-901338,901536-901640,901721-901831,
            901912-902016,902245-902391,903273-903354,903445-903786,
            903873-904177,904259-904435,904799-904852,905171-905254,
            905855-905968,906048-906321,907552-907926,908003-908267,
            908352-908538,908615-909052,909895-909966,910037-910630,
            911471-911623,911700-911828,912326-912657,912705-912840,
            913046-913491,913580-915087,915169-915431,915622-915738,
            915844-916014,916743-916845,916930-916988,918360-918461,
            918560-918649,918727-918877,919745-919830,919926-920102,
            920915-920978,921859-922008,923132-923211,923311-923376,
            924540-924747,925502-925575,925761-925848,926140-926312,
            926541-926609,926698-926741,927074-927167,927290-927366,
            927475-927552,927992-928085
          Length = 3314

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +1

Query: 13   KSIKYKFT-AHFMRSASLSNXVQFELQLFVTFIHSKLNCKLSIRKNK 150
            +S+  KF       +A+ SN  +F L   +TF  ++LNC L++   K
Sbjct: 2187 RSLAIKFPRVESFSTAAKSNGPKFSLTETITFYSNELNCPLNVTLEK 2233


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,597,624
Number of Sequences: 37544
Number of extensions: 375625
Number of successful extensions: 658
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 658
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2303447664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)