Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_pT_P02
(712 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF025468-4|AAB71045.1| 449|Caenorhabditis elegans Hypothetical ... 109 3e-24
AL021481-5|CAA16336.2| 455|Caenorhabditis elegans Hypothetical ... 100 2e-21
Z97191-2|CAB10025.1| 481|Caenorhabditis elegans Hypothetical pr... 92 3e-19
AL031630-22|CAA20995.2| 454|Caenorhabditis elegans Hypothetical... 87 2e-17
U28928-5|AAQ01535.1| 434|Caenorhabditis elegans Hypothetical pr... 77 9e-15
U28928-4|AAA68337.2| 489|Caenorhabditis elegans Hypothetical pr... 77 9e-15
Z11505-1|CAA77582.1| 460|Caenorhabditis elegans Hypothetical pr... 68 6e-12
Z30423-12|CAA83006.2| 486|Caenorhabditis elegans Hypothetical p... 41 8e-04
AF031935-1|AAB87066.1| 486|Caenorhabditis elegans UNC-47 protein. 41 8e-04
AL034393-17|CAA22315.1| 503|Caenorhabditis elegans Hypothetical... 37 0.016
AL021474-3|CAD54163.1| 519|Caenorhabditis elegans Hypothetical ... 36 0.038
AC024842-7|AAF59620.1| 457|Caenorhabditis elegans Hypothetical ... 34 0.087
Z69883-3|CAA93741.2| 450|Caenorhabditis elegans Hypothetical pr... 34 0.12
U00055-6|AAA50724.1| 494|Caenorhabditis elegans Hypothetical pr... 33 0.27
AF125971-5|AAD14765.1| 484|Caenorhabditis elegans Hypothetical ... 32 0.47
L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical pr... 29 3.3
AF047658-3|ABC71828.1| 315|Caenorhabditis elegans Hypothetical ... 29 3.3
Z19152-7|CAA79539.2| 643|Caenorhabditis elegans Hypothetical pr... 29 4.3
U23518-2|AAC70884.4| 496|Caenorhabditis elegans Hypothetical pr... 28 7.6
>AF025468-4|AAB71045.1| 449|Caenorhabditis elegans Hypothetical
protein T27A1.5 protein.
Length = 449
Score = 109 bits (261), Expect = 3e-24
Identities = 67/209 (32%), Positives = 103/209 (49%)
Frame = -3
Query: 710 LPLFXGTVIFAMEGIGVVLPVENTMAKPQHFXGCPGVLNLTMSVVVLLYMIMGFLGYVKY 531
LPLF GTV+FA EG+ VVLP+EN M +P HF GVLN + +V+L+YM +GF G+++Y
Sbjct: 235 LPLFFGTVMFAFEGVAVVLPIENQMNEPIHFITPNGVLNTSCILVLLVYMTVGFFGFLRY 294
Query: 530 GDQAMGSITLNLDTGEXXXXXXXXXXXXXXXFTYTLQFYVPMEIVWRNTKDHVAQKYHNI 351
G+ ++TLNL +Y LQFYVPME V + K V +
Sbjct: 295 GNDIKDTLTLNLPQ-TPFYQAIKVMFVLCILVSYPLQFYVPMERVEKWIKRKVVEAKQEP 353
Query: 350 TEAVMRXXXXXXXXXXXXXLPSLEQVIGLEGAFFYSFLGLIAPSILDLIFKWERGLGRNN 171
+R +P L I L G+ + L L+ P +++L+ + +
Sbjct: 354 MIYAIRFGGVLLTCAMAQLIPHLALFISLVGSVAGTSLTLVFPPLIELLCSYSK-QELTK 412
Query: 170 WILFKDLFLIFFGCFVLVAGVTQSIREII 84
W+ +++ L+ F G S+ +II
Sbjct: 413 WVWIRNIGLMAFAMVGFTTGTYASMVQII 441
>AL021481-5|CAA16336.2| 455|Caenorhabditis elegans Hypothetical
protein Y43F4B.7 protein.
Length = 455
Score = 99.5 bits (237), Expect = 2e-21
Identities = 63/212 (29%), Positives = 97/212 (45%), Gaps = 1/212 (0%)
Frame = -3
Query: 710 LPLFXGTVIFAMEGIGVVLPVENTMAKPQHFXGCPGVLNLTMSVVVLLYMIMGFLGYVKY 531
LPLF GTV+FA EG+ V++P+EN M P F GVLN + VV+ ++ + GF GY+
Sbjct: 245 LPLFFGTVMFAFEGVAVIMPIENRMQSPHAFISWNGVLNSSCLVVLAIFSVTGFYGYLSL 304
Query: 530 GDQAMGSITLNLDTGEXXXXXXXXXXXXXXXFTYTLQFYVPMEIVWRNTKDHVAQKYHNI 351
G+ + TLNL +Y LQFYVPME + + + +
Sbjct: 305 GNDVKDTATLNLPM-TPFYQTIKLMFVACIMISYPLQFYVPMERIEKWITRKIPVDKQTL 363
Query: 350 TEAVMRXXXXXXXXXXXXXLPSLEQVIGLEGAFFYSFLGLIAPSILDLIFKWERG-LGRN 174
+ R +P L I L GAF + + L+ P ++L+ + + L
Sbjct: 364 YIYIARYSGVILTCAIAELIPHLALFISLIGAFSGASMALLFPPCIELLTSYAKNELSTG 423
Query: 173 NWILFKDLFLIFFGCFVLVAGVTQSIREIIRT 78
WI K++ L+ F G ++ EI +T
Sbjct: 424 LWI--KNIVLLTFAFIGFTTGTYSALIEIAKT 453
>Z97191-2|CAB10025.1| 481|Caenorhabditis elegans Hypothetical
protein H32K16.1 protein.
Length = 481
Score = 92.3 bits (219), Expect = 3e-19
Identities = 62/217 (28%), Positives = 103/217 (47%), Gaps = 8/217 (3%)
Frame = -3
Query: 710 LPLFXGTVIFAMEGIGVVLPVENTMAKPQHFXGCPGVLNLTMSVVVLLYMIMGFLGYVKY 531
+ L G +I++ EG +VLP+EN++ P+ G GVL+ M++V +LY +GF GYV +
Sbjct: 262 ISLAAGALIYSFEGQAMVLPMENSLKYPKDMTGATGVLSTAMNLVTVLYAFLGFFGYVTF 321
Query: 530 GDQAMGSITLNLDTGEXXXXXXXXXXXXXXXFTYTLQFYVPMEIVWRNTKDHVAQ---KY 360
G GS+TLNL + +Q YV ++++ + + +++
Sbjct: 322 GPAVQGSLTLNLPNSILTVSIKGLLVLKIFFGS-AIQLYVIVQMLLPSLRSKISEDRKMV 380
Query: 359 HNITEAVMRXXXXXXXXXXXXXLPSLEQVIGLEGAFFYSFLGLIAPSILDL-----IFKW 195
H + +R +P+L Q+I L G + LI PS LD +FK
Sbjct: 381 HRLLPYALRLGLMLISLCIALIVPNLMQIIPLVGITSGLLISLILPSFLDCMVFLPVFKK 440
Query: 194 ERGLGRNNWILFKDLFLIFFGCFVLVAGVTQSIREII 84
+ + + L ++FL G F L AG+ SI +II
Sbjct: 441 QGDMFKFYQKLIINVFLFVLGWFFLGAGLYSSIDDII 477
>AL031630-22|CAA20995.2| 454|Caenorhabditis elegans Hypothetical
protein Y38H6C.17 protein.
Length = 454
Score = 86.6 bits (205), Expect = 2e-17
Identities = 58/218 (26%), Positives = 102/218 (46%), Gaps = 8/218 (3%)
Frame = -3
Query: 704 LFXGTVIFAMEGIGVVLPVENTMAKPQHFXGCPGVLNLTMSVVVLLYMIMGFLGYVKYGD 525
L G++I++ EG +VLP+EN++ PQ G GVL+ M+VV++ Y +GF GY+ +G
Sbjct: 236 LAAGSLIYSFEGQAMVLPLENSLKHPQDMRGLTGVLSTAMNVVIVFYAFLGFFGYIAFGP 295
Query: 524 QAMGSITLNLDTGEXXXXXXXXXXXXXXXFTYTLQFYVPMEIVWRNTKDHVAQK---YHN 354
GS+TLNL LQ ++ ++++ + + V++ H
Sbjct: 296 DVRGSLTLNLPNSVLSVTVKGLLVLKVLLGN-ALQLFIIVQMLLPSLQAKVSENRKLIHK 354
Query: 353 ITEAVMRXXXXXXXXXXXXXLPSLEQVIGLEGAFFYSFLGLIAPSILDLI----FKWERG 186
I +R +P+L ++I G + LI PS LD I ERG
Sbjct: 355 ILPYALRLSLMLVSLSLALAVPNLTEIIPFVGITSGLLISLIIPSFLDCIVFLPVLKERG 414
Query: 185 LGRNNW-ILFKDLFLIFFGCFVLVAGVTQSIREIIRTS 75
+N + + ++ + G +L +G+ SI ++I +
Sbjct: 415 EKKNYYQKMITNIVIFVLGWLLLGSGLYSSIDDVINNN 452
>U28928-5|AAQ01535.1| 434|Caenorhabditis elegans Hypothetical
protein C44B7.6b protein.
Length = 434
Score = 77.4 bits (182), Expect = 9e-15
Identities = 53/212 (25%), Positives = 93/212 (43%), Gaps = 8/212 (3%)
Frame = -3
Query: 695 GTVIFAMEGIGVVLPVENTMAKPQHFXGCPGVLNLTMSVVVLLYMIMGFLGYVKYGDQAM 516
GT+++A+EG +VLP+EN M KP+ G GVL++ + +VV++Y GF G++ YG+
Sbjct: 223 GTILYALEGQAMVLPLENRMKKPEDMKGPFGVLSVGVGMVVVIYSFAGFFGFLTYGNDVQ 282
Query: 515 GSITLNLDTGEXXXXXXXXXXXXXXXFTYTLQFYVPMEIVWRNTKDH------VAQKYHN 354
SITLNL + + +Q + + ++W K V+
Sbjct: 283 DSITLNL-PNDHLGIFVKAVLLFVVYSGFLIQVFPIVAMIWPAIKKKLRTTCGVSTTTKR 341
Query: 353 ITEAVMRXXXXXXXXXXXXXLPSLEQVIGLEGAFFYSFLGLIAPSILDLIFKWERGLGRN 174
I R +P L ++ L G L L+ PS+ L+ + R
Sbjct: 342 IVHFAFRYSIVIVVFLLSYAIPRLSDMVPLVGVTAGMLLALVFPSLFHLLIFLPQFECRI 401
Query: 173 NWI--LFKDLFLIFFGCFVLVAGVTQSIREII 84
++ +F D I G F ++ G ++ ++
Sbjct: 402 GFLFDIFLDFVCIILGMFFVIYGSITHVQHLM 433
>U28928-4|AAA68337.2| 489|Caenorhabditis elegans Hypothetical
protein C44B7.6a protein.
Length = 489
Score = 77.4 bits (182), Expect = 9e-15
Identities = 53/212 (25%), Positives = 93/212 (43%), Gaps = 8/212 (3%)
Frame = -3
Query: 695 GTVIFAMEGIGVVLPVENTMAKPQHFXGCPGVLNLTMSVVVLLYMIMGFLGYVKYGDQAM 516
GT+++A+EG +VLP+EN M KP+ G GVL++ + +VV++Y GF G++ YG+
Sbjct: 278 GTILYALEGQAMVLPLENRMKKPEDMKGPFGVLSVGVGMVVVIYSFAGFFGFLTYGNDVQ 337
Query: 515 GSITLNLDTGEXXXXXXXXXXXXXXXFTYTLQFYVPMEIVWRNTKDH------VAQKYHN 354
SITLNL + + +Q + + ++W K V+
Sbjct: 338 DSITLNL-PNDHLGIFVKAVLLFVVYSGFLIQVFPIVAMIWPAIKKKLRTTCGVSTTTKR 396
Query: 353 ITEAVMRXXXXXXXXXXXXXLPSLEQVIGLEGAFFYSFLGLIAPSILDLIFKWERGLGRN 174
I R +P L ++ L G L L+ PS+ L+ + R
Sbjct: 397 IVHFAFRYSIVIVVFLLSYAIPRLSDMVPLVGVTAGMLLALVFPSLFHLLIFLPQFECRI 456
Query: 173 NWI--LFKDLFLIFFGCFVLVAGVTQSIREII 84
++ +F D I G F ++ G ++ ++
Sbjct: 457 GFLFDIFLDFVCIILGMFFVIYGSITHVQHLM 488
>Z11505-1|CAA77582.1| 460|Caenorhabditis elegans Hypothetical
protein F59B2.2 protein.
Length = 460
Score = 68.1 bits (159), Expect = 6e-12
Identities = 54/218 (24%), Positives = 93/218 (42%), Gaps = 9/218 (4%)
Frame = -3
Query: 695 GTVIFAMEGIGVVLPVENTMAKPQHFXGCPGVLNLTMSVVVLLYMIMGFLGYVKYGDQAM 516
G ++A EG ++LP+EN + P F GVL+ TM + +GF GY +GD
Sbjct: 241 GMSMYAFEGQTMILPIENKLDNPAAFLAPFGVLSTTMIICTAFMTALGFFGYTGFGDSIA 300
Query: 515 GSITLNLDTGEXXXXXXXXXXXXXXXFTYTLQFYVPMEIVWRNTKDHVAQKYHNI----T 348
+IT N+ E ++ YV ++ + + ++ N+ +
Sbjct: 301 PTITTNVPK-EGLYSTVNVFLMLQSLLGNSIAMYVVYDMFFNGFRRKFGARFPNVPKWLS 359
Query: 347 EAVMRXXXXXXXXXXXXXLPSLEQVIGLEGAFFYSFLGLIAPSILDLIFKWE--RGL--- 183
+ R +P LE +I L G + LI P ++I W +GL
Sbjct: 360 DKGFRVFWVLVTYLMAVLIPKLEIMIPLVGVTSGALCALIFPPFFEMITFWTDWKGLLTY 419
Query: 182 GRNNWILFKDLFLIFFGCFVLVAGVTQSIREIIRTSSQ 69
+ +F +L ++ G F ++AGV +I II++ SQ
Sbjct: 420 RQRMTKIFINLVVMAIGVFAIIAGVYTNIHAIIQSFSQ 457
>Z30423-12|CAA83006.2| 486|Caenorhabditis elegans Hypothetical
protein T20G5.6 protein.
Length = 486
Score = 41.1 bits (92), Expect = 8e-04
Identities = 50/221 (22%), Positives = 86/221 (38%), Gaps = 11/221 (4%)
Frame = -3
Query: 710 LPLFXGTVIFAMEGIGVVLP-VENTMAKPQHFXGCPGVLNLTMSVVVLLYMIMGFLGYVK 534
LP G V+F + LP +E M P F +L + + ++ G LG++
Sbjct: 267 LPTIVGMVVFGYTS-HIFLPNLEGNMKNPAQFNV---MLKWSHIAAAVFKVVFGMLGFLT 322
Query: 533 YGDQAMGSITLNLDTGEXXXXXXXXXXXXXXXFTYTLQFYVPMEIVWRN----------T 384
+G+ I+ +L + +Y L FY ++++ N T
Sbjct: 323 FGELTQEEISNSLPN-QSFKILVNLILVVKALLSYPLPFYAAVQLLKNNLFLGYPQTPFT 381
Query: 383 KDHVAQKYHNITEAVMRXXXXXXXXXXXXXLPSLEQVIGLEGAFFYSFLGLIAPSILDLI 204
+ K +R +P L +++GL G + L I P++ L
Sbjct: 382 SCYSPDKSLREWAVTLRIILVLFTLFVALSVPYLVELMGLVGNITGTMLSFIWPALFHLY 441
Query: 203 FKWERGLGRNNWILFKDLFLIFFGCFVLVAGVTQSIREIIR 81
K E+ L NN+ D +I GC V ++GV S E++R
Sbjct: 442 IK-EKTL--NNFEKRFDQGIIIMGCSVCISGVYFSSMELLR 479
>AF031935-1|AAB87066.1| 486|Caenorhabditis elegans UNC-47 protein.
Length = 486
Score = 41.1 bits (92), Expect = 8e-04
Identities = 50/221 (22%), Positives = 86/221 (38%), Gaps = 11/221 (4%)
Frame = -3
Query: 710 LPLFXGTVIFAMEGIGVVLP-VENTMAKPQHFXGCPGVLNLTMSVVVLLYMIMGFLGYVK 534
LP G V+F + LP +E M P F +L + + ++ G LG++
Sbjct: 267 LPTIVGMVVFGYTS-HIFLPNLEGNMKNPAQFNV---MLKWSHIAAAVFKVVFGMLGFLT 322
Query: 533 YGDQAMGSITLNLDTGEXXXXXXXXXXXXXXXFTYTLQFYVPMEIVWRN----------T 384
+G+ I+ +L + +Y L FY ++++ N T
Sbjct: 323 FGELTQEEISNSLPN-QSFKILVNLILVVKALLSYPLPFYAAVQLLKNNLFLGYPQTPFT 381
Query: 383 KDHVAQKYHNITEAVMRXXXXXXXXXXXXXLPSLEQVIGLEGAFFYSFLGLIAPSILDLI 204
+ K +R +P L +++GL G + L I P++ L
Sbjct: 382 SCYSPDKSLREWAVTLRIILVLFTLFVALSVPYLVELMGLVGNITGTMLSFIWPALFHLY 441
Query: 203 FKWERGLGRNNWILFKDLFLIFFGCFVLVAGVTQSIREIIR 81
K E+ L NN+ D +I GC V ++GV S E++R
Sbjct: 442 IK-EKTL--NNFEKRFDQGIIIMGCSVCISGVYFSSMELLR 479
>AL034393-17|CAA22315.1| 503|Caenorhabditis elegans Hypothetical
protein Y18D10A.23 protein.
Length = 503
Score = 36.7 bits (81), Expect = 0.016
Identities = 18/66 (27%), Positives = 35/66 (53%)
Frame = -3
Query: 704 LFXGTVIFAMEGIGVVLPVENTMAKPQHFXGCPGVLNLTMSVVVLLYMIMGFLGYVKYGD 525
L GT++FA G G +++ MA P F V++ + ++ L+Y+ + G + YGD
Sbjct: 233 LAYGTIVFAFGGHGAFPTIQHDMAMPHQFN--KSVIS-SYILITLVYLAVSITGLIAYGD 289
Query: 524 QAMGSI 507
+ ++
Sbjct: 290 SMIDTV 295
>AL021474-3|CAD54163.1| 519|Caenorhabditis elegans Hypothetical
protein Y32F6A.4 protein.
Length = 519
Score = 35.5 bits (78), Expect = 0.038
Identities = 18/72 (25%), Positives = 38/72 (52%)
Frame = -3
Query: 704 LFXGTVIFAMEGIGVVLPVENTMAKPQHFXGCPGVLNLTMSVVVLLYMIMGFLGYVKYGD 525
L GT++F++ G +++ M +P+ F + L +++ +Y+ + +GY+ YGD
Sbjct: 249 LSMGTLLFSVGGHSAFPTIQHDMKQPKEFTRS---VFLAFTIMAFMYIPVCIMGYLVYGD 305
Query: 524 QAMGSITLNLDT 489
SI ++ T
Sbjct: 306 SLRDSIIPSIQT 317
>AC024842-7|AAF59620.1| 457|Caenorhabditis elegans Hypothetical
protein Y59H11AR.4 protein.
Length = 457
Score = 34.3 bits (75), Expect = 0.087
Identities = 20/62 (32%), Positives = 29/62 (46%)
Frame = -3
Query: 692 TVIFAMEGIGVVLPVENTMAKPQHFXGCPGVLNLTMSVVVLLYMIMGFLGYVKYGDQAMG 513
T+IFA G + + + M PQH+ C L+ + LLY + G+ YGD
Sbjct: 202 TIIFAYGGHPCIPTIVHDMKTPQHYFRC---FLLSYIALFLLYTPVSLFGFWIYGDSVSD 258
Query: 512 SI 507
SI
Sbjct: 259 SI 260
>Z69883-3|CAA93741.2| 450|Caenorhabditis elegans Hypothetical
protein C27C12.4 protein.
Length = 450
Score = 33.9 bits (74), Expect = 0.12
Identities = 18/55 (32%), Positives = 34/55 (61%), Gaps = 7/55 (12%)
Frame = -3
Query: 254 FFYSFLGLIAPSILD-LIFKWERGLGRNNWI------LFKDLFLIFFGCFVLVAG 111
FF++F ++ PSI+ L KW + +G + ++ L+ +++L++FG VL AG
Sbjct: 59 FFFTFFNIVIPSIVQKLGAKWSQIIGASGYLFFMLTFLYLNVWLLYFGSAVLGAG 113
>U00055-6|AAA50724.1| 494|Caenorhabditis elegans Hypothetical
protein R02F2.8 protein.
Length = 494
Score = 32.7 bits (71), Expect = 0.27
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = -3
Query: 695 GTVIFAMEGIGVVLPVENTMAKPQHFXGCPGVLNLTMSVVVLLYMIMGFLGYVKYG 528
GT +FA G + +++ M KP HF + L + +LYM + GY YG
Sbjct: 221 GTFVFAFGGHATLPTIQHDMKKPAHFVHS---VVLAIIFCTMLYMCIAVGGYFVYG 273
>AF125971-5|AAD14765.1| 484|Caenorhabditis elegans Hypothetical
protein Y4C6B.2a protein.
Length = 484
Score = 31.9 bits (69), Expect = 0.47
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = -3
Query: 695 GTVIFAMEGIGVVLPVENTMAKPQHFXGCPGVLNLTMSVVVLLYMIMGFLGYVKYGDQAM 516
GT++F+ G +++ M KP HF + + ++ + Y+ + GY YG
Sbjct: 208 GTIMFSYGGHCAFPTIQHDMKKPHHFSRS---IIIAFIIIFIFYLPVSMSGYFVYGSSLT 264
Query: 515 GSI 507
SI
Sbjct: 265 DSI 267
>L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical protein
ZK688.5a protein.
Length = 1620
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +1
Query: 46 KVASNSTY*ELVLIISLMLCVTPATSTKQPKNIRNKSLNKIQLFLPRPRSHLKMRSSMD 222
KV + + + ++VL S L T A+++ QP + SLN + PR R+H R D
Sbjct: 1515 KVRAGTDWNDIVLNESRQLLPTIASTSSQPST-SSSSLNTVSTNNPRKRNHDGSREDND 1572
>AF047658-3|ABC71828.1| 315|Caenorhabditis elegans Hypothetical
protein K03H6.4 protein.
Length = 315
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +3
Query: 270 YNLFKTW*RRCRNHSKSGKNRSHDCFRDVMVFL 368
Y + W CR H GK DC R M+FL
Sbjct: 55 YVVVTIWNSACRLHMGEGKTTRADCIRRPMMFL 87
>Z19152-7|CAA79539.2| 643|Caenorhabditis elegans Hypothetical
protein B0464.6 protein.
Length = 643
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +1
Query: 58 NSTY*ELVLIISLMLCVTPATSTKQPKNIRNKSLNKIQLFLPRPRS 195
NS+ V+I SL++ + A K P ++ NK+Q PRP S
Sbjct: 98 NSSISLFVIIYSLIMIASYAFEIKFPNALKQLVYNKVQSKPPRPES 143
>U23518-2|AAC70884.4| 496|Caenorhabditis elegans Hypothetical
protein F21D12.3 protein.
Length = 496
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/72 (25%), Positives = 32/72 (44%)
Frame = -3
Query: 704 LFXGTVIFAMEGIGVVLPVENTMAKPQHFXGCPGVLNLTMSVVVLLYMIMGFLGYVKYGD 525
L G +FA G V +++ M P+ F + VV+LY+ + +V YGD
Sbjct: 238 LSFGIFLFAFSGHYVFPTIQHDMKNPRDFTKS---IFAGFLGVVILYLPLCIFAFVVYGD 294
Query: 524 QAMGSITLNLDT 489
S+ ++ +
Sbjct: 295 SMTDSVIYSIQS 306
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,777,903
Number of Sequences: 27780
Number of extensions: 299465
Number of successful extensions: 642
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 636
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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