Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_pT_P01
(580 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0022 + 154399-154428,154528-154716,155469-155619,155724-15... 197 5e-51
06_03_1341 + 29458085-29458198,29458448-29458526,29458923-294589... 183 8e-47
09_06_0359 + 22508900-22509439 160 6e-40
06_03_1340 + 29455210-29455290,29455493-29455571,29455767-294558... 159 1e-39
02_01_0160 + 1116160-1116678 153 1e-37
02_05_0830 + 32066419-32066676,32067779-32067820,32068375-320688... 144 3e-35
01_02_0015 + 10191793-10191957,10192085-10192229,10192331-101924... 140 7e-34
06_01_0798 - 5944815-5944888,5945084-5945243,5945319-5945356,594... 134 4e-32
08_02_1563 + 27886202-27886446,27886533-27886618,27886942-278870... 130 1e-30
10_01_0309 + 3417602-3418147 128 3e-30
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 125 2e-29
09_06_0098 + 20850535-20850612,20851258-20851333,20851474-208515... 125 3e-29
08_02_1578 - 27992848-27992893,27993431-27993515,27994107-279942... 121 5e-28
06_01_0214 + 1634171-1634173,1634263-1634742 109 2e-24
03_02_0048 - 5265595-5265783,5265882-5265992,5266259-5266547,526... 99 3e-21
06_03_1076 + 27409107-27409204,27409731-27409835,27409915-274100... 86 2e-17
03_06_0417 - 33782577-33782687,33782996-33783052,33783110-337832... 85 5e-17
01_05_0478 - 22587881-22588021,22588126-22588266,22588436-225886... 81 6e-16
06_03_1075 + 27399279-27399376,27399449-27399555,27400791-274008... 67 1e-11
07_03_0359 - 17201711-17201803,17202185-17202332,17202437-172025... 54 8e-08
11_06_0322 + 22358505-22358642,22358690-22358791,22359444-223595... 52 3e-07
02_01_0086 + 613113-613532 50 1e-06
08_02_0053 + 11721658-11721689,11721960-11722710 45 4e-05
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 45 4e-05
01_01_0077 - 585670-585787,585921-586687 40 0.001
06_01_1095 + 8984363-8984789,8985175-8985416,8985500-8985622,898... 29 2.7
10_01_0310 + 3425099-3425218 29 3.5
01_06_0865 - 32567145-32568003,32568123-32568846,32569067-32569151 27 8.2
>05_01_0022 +
154399-154428,154528-154716,155469-155619,155724-155812,
156391-156445,156533-156618,156705-156857
Length = 250
Score = 197 bits (481), Expect = 5e-51
Identities = 98/163 (60%), Positives = 117/163 (71%), Gaps = 3/163 (1%)
Frame = -3
Query: 569 VTHKVSFDMKIGDD---NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIK 399
+T+KV FD+ IG+ N+G +VIGL+G VP+T ENF L +G GYKGS FHRVIK
Sbjct: 81 ITNKVYFDISIGNPVGKNVGRVVIGLYGDDVPQTAENFRALCTGEKGFGYKGSSFHRVIK 140
Query: 398 NFMIQXXXXXXXXXXXGRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVK 219
+FMIQ G+SIYG F+DENFKL H G G +SMANAG +TNGSQFFI TVK
Sbjct: 141 DFMIQGGDFDKGNGTGGKSIYGRTFKDENFKLVHTGPGVVSMANAGPNTNGSQFFICTVK 200
Query: 218 TPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVISD 90
TPWLDGRHVVFG+V+EGMD+V+ IE T DRP K VVIS+
Sbjct: 201 TPWLDGRHVVFGQVIEGMDIVKMIESQETDRGDRPKKKVVISE 243
>06_03_1341 +
29458085-29458198,29458448-29458526,29458923-29458970,
29459064-29459087,29459554-29459736,29459845-29459920,
29460020-29460158
Length = 220
Score = 183 bits (446), Expect = 8e-47
Identities = 97/168 (57%), Positives = 112/168 (66%), Gaps = 7/168 (4%)
Frame = -3
Query: 569 VTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFH 411
VTHKV FD++I G +V+GLFGKTVPKT ENF L +G G +KGS FH
Sbjct: 49 VTHKVYFDVEIDGKPAGRVVMGLFGKTVPKTAENFRALCTGEKGTGKSGKALHFKGSAFH 108
Query: 410 RVIKNFMIQXXXXXXXXXXXGRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFI 231
R+I +FMIQ G SIYG +F DENFK+KH G G LSMANAG+DTNGSQFFI
Sbjct: 109 RIIPSFMIQGGDFTLGDGRGGESIYGTKFADENFKIKHTGPGLLSMANAGRDTNGSQFFI 168
Query: 230 TTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVISDT 87
TTV T WLDG+HVVFGKVL GMDVV KIE + P VVI+D+
Sbjct: 169 TTVTTSWLDGKHVVFGKVLSGMDVVYKIEAEGQQSGS-PKSKVVIADS 215
>09_06_0359 + 22508900-22509439
Length = 179
Score = 160 bits (389), Expect = 6e-40
Identities = 86/164 (52%), Positives = 104/164 (63%), Gaps = 7/164 (4%)
Frame = -3
Query: 560 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 402
KV FD+ IG G +V+ LF TVPKT ENF L +G G YKGS FHR+I
Sbjct: 7 KVFFDILIGKARAGRVVMELFADTVPKTAENFRCLCTGEKGLGASGKPLHYKGSAFHRII 66
Query: 401 KNFMIQXXXXXXXXXXXGRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTV 222
NFM Q G SIYG+RF DENFKL+H G G LSMANAG +TNGSQFFI T
Sbjct: 67 PNFMCQGGDFTRGNGTGGESIYGDRFADENFKLRHTGPGVLSMANAGPNTNGSQFFICTT 126
Query: 221 KTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVISD 90
+T WLDG+HVVFGKV++G VV+K+E +G+ + V+I D
Sbjct: 127 RTTWLDGKHVVFGKVVDGYTVVEKMEQVGSGSGG-TAERVLIED 169
>06_03_1340 +
29455210-29455290,29455493-29455571,29455767-29455814,
29455908-29455931,29456433-29456615,29456730-29456805,
29456937-29457072
Length = 208
Score = 159 bits (387), Expect = 1e-39
Identities = 90/168 (53%), Positives = 101/168 (60%), Gaps = 7/168 (4%)
Frame = -3
Query: 569 VTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFH 411
VT KV FD+ I G IV+GLFG TVPKT ENF + +G G YKG+ FH
Sbjct: 38 VTTKVFFDITINGKPAGRIVMGLFGNTVPKTAENFRAICTGEKGLGKSGKPLSYKGTPFH 97
Query: 410 RVIKNFMIQXXXXXXXXXXXGRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFI 231
R+I FMIQ SIYG F DENFK+ H G LSMAN KDTNGSQFFI
Sbjct: 98 RIIPGFMIQGGDTVSGNGTGCDSIYGGMFPDENFKINHSAPGLLSMANYAKDTNGSQFFI 157
Query: 230 TTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVISDT 87
TTVK LDG+HVVFGKVL GMDVV KIE + P V+ISD+
Sbjct: 158 TTVKLTRLDGKHVVFGKVLSGMDVVYKIE-AEGSQSGTPRSKVLISDS 204
>02_01_0160 + 1116160-1116678
Length = 172
Score = 153 bits (371), Expect = 1e-37
Identities = 86/164 (52%), Positives = 99/164 (60%), Gaps = 7/164 (4%)
Frame = -3
Query: 560 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 402
+V FDM +G G IV+ L+ K VP+T ENF L +G G YKGS FHRVI
Sbjct: 5 RVFFDMTVGGAPAGRIVMELYAKDVPRTAENFRALCTGEKGVGKSGKPLHYKGSTFHRVI 64
Query: 401 KNFMIQXXXXXXXXXXXGRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTV 222
FM Q G SIYGE+F DE FK KH G LSMANAG +TNGSQFFI TV
Sbjct: 65 PEFMCQGGDFTRGNGTGGESIYGEKFADEVFKFKHDSPGILSMANAGPNTNGSQFFICTV 124
Query: 221 KTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVISD 90
WLDG+HVVFG+V+EGMDVV+ IE V K VVI+D
Sbjct: 125 PCSWLDGKHVVFGRVVEGMDVVKAIE-KVGSRGGSTAKPVVIAD 167
>02_05_0830 +
32066419-32066676,32067779-32067820,32068375-32068875,
32069048-32069135,32069251-32069303,32069499-32069603,
32069886-32069961,32070038-32070075,32070162-32070242,
32070353-32070364
Length = 417
Score = 144 bits (350), Expect = 3e-35
Identities = 81/175 (46%), Positives = 99/175 (56%), Gaps = 22/175 (12%)
Frame = -3
Query: 548 DMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGY-------------------- 429
D+ IG D G IV+ L+ P+T ENF L +G
Sbjct: 38 DVSIGGDMEGRIVVELYASVAPRTAENFRALCTGEKGVSAATGVPLHYKISLKAASVCTR 97
Query: 428 --KGSKFHRVIKNFMIQXXXXXXXXXXXGRSIYGERFEDENFKLKHYGAGWLSMANAGKD 255
KGS HR++K FM+Q G SIYG FEDENF LKH G LSMANAG D
Sbjct: 98 WTKGSCIHRIVKGFMVQGGDITAGDGTGGESIYGLNFEDENFVLKHERKGMLSMANAGPD 157
Query: 254 TNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVISD 90
TNGSQFFITT +TP LDG+HVVFG+V++GM VV+ +E G +DRP+ D+VI D
Sbjct: 158 TNGSQFFITTTRTPHLDGKHVVFGRVIKGMGVVRSMEHVSVGESDRPITDIVIVD 212
>01_02_0015 +
10191793-10191957,10192085-10192229,10192331-10192419,
10193009-10193063,10193607-10193692,10194006-10194065
Length = 199
Score = 140 bits (339), Expect = 7e-34
Identities = 70/117 (59%), Positives = 80/117 (68%)
Frame = -3
Query: 569 VTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFM 390
V K FD+++G + G IVIGLFG+ VPKT +NF L +G GYKG FHR+IK+FM
Sbjct: 64 VNSKCFFDVEVGGEPAGRIVIGLFGEVVPKTVDNFRALCTGDKGYGYKGCSFHRIIKDFM 123
Query: 389 IQXXXXXXXXXXXGRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVK 219
IQ GRSIYGE F+DENF LKH G G LSMANAG DTNGSQFFI TVK
Sbjct: 124 IQGGDFQNNNGTGGRSIYGECFDDENFTLKHTGPGVLSMANAGPDTNGSQFFICTVK 180
>06_01_0798 -
5944815-5944888,5945084-5945243,5945319-5945356,
5945438-5945513,5946114-5946218,5947486-5947986,
5948638-5948710,5949550-5949593,5949938-5950174
Length = 435
Score = 134 bits (325), Expect = 4e-32
Identities = 66/113 (58%), Positives = 78/113 (69%)
Frame = -3
Query: 428 KGSKFHRVIKNFMIQXXXXXXXXXXXGRSIYGERFEDENFKLKHYGAGWLSMANAGKDTN 249
+GS FHRVIK FM+Q G SIYG +FEDENF LKH G LSMAN+G +TN
Sbjct: 118 QGSCFHRVIKGFMVQGGDITAGDGTGGESIYGLKFEDENFVLKHERKGMLSMANSGPNTN 177
Query: 248 GSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVISD 90
GSQFFITT +TP LDG+HVVFG+V++GM VV+ +E G DRP DV I D
Sbjct: 178 GSQFFITTTRTPHLDGKHVVFGRVIKGMGVVRSVEHAPVGEADRPTSDVEIVD 230
Score = 35.5 bits (78), Expect = 0.031
Identities = 21/52 (40%), Positives = 27/52 (51%)
Frame = -3
Query: 548 DMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNF 393
D+ IG + G IVI L+ VP+T ENF L +G G K H K+F
Sbjct: 31 DVSIGGEIEGRIVIELYASVVPRTAENFRALCTGEKGVGAVTGK-HLHYKDF 81
>08_02_1563 +
27886202-27886446,27886533-27886618,27886942-27887030,
27887193-27887432,27887527-27887648,27888103-27888178,
27888276-27888383,27888465-27888641,27888959-27889176,
27889313-27889445,27889584-27889807,27890052-27890205,
27890297-27890380
Length = 651
Score = 130 bits (313), Expect = 1e-30
Identities = 73/145 (50%), Positives = 90/145 (62%), Gaps = 1/145 (0%)
Frame = -3
Query: 527 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXG 348
++G I + L+ + PKT ENF + Y FHRVIK FMIQ
Sbjct: 503 SMGDIHLRLYPEECPKTVENFTTHCRNGY---YDNLIFHRVIKGFMIQTGDPLGDGTGG- 558
Query: 347 RSIYGERFEDENFK-LKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLE 171
+SI+G FEDE K L+H LSMANAG +TNGSQFFITTV TPWLD +H VFG+V++
Sbjct: 559 QSIWGREFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVVK 618
Query: 170 GMDVVQKIEMTVTGANDRPVKDVVI 96
GMDVVQ+IE T ND+P +DV I
Sbjct: 619 GMDVVQQIEKVKTDKNDKPYQDVKI 643
>10_01_0309 + 3417602-3418147
Length = 181
Score = 128 bits (309), Expect = 3e-30
Identities = 76/167 (45%), Positives = 95/167 (56%), Gaps = 10/167 (5%)
Frame = -3
Query: 560 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLA--QKPEGEG-----YKGSKFHRVI 402
+V D+ IG + +G +VI L VP T ENF +L ++ G YKGS FHRV+
Sbjct: 12 RVFLDIAIGGEWVGRVVIELLADKVPDTAENFRRLCTGERAGRSGKSRLHYKGSAFHRVV 71
Query: 401 KNFMIQXXXXXXXXXXXGRSIY---GERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFI 231
FM Q G S F DE F +KH G G +SMANAG +TNGSQFFI
Sbjct: 72 PGFMCQGGDITAGNGTGGESALDGAARHFPDEGFAVKHDGPGVVSMANAGPNTNGSQFFI 131
Query: 230 TTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVISD 90
T K PWLDGRHV FG+V+ GM V+ I+ T T + + VK VVI+D
Sbjct: 132 TVDKAPWLDGRHVAFGRVVAGMGAVRAIDRTGTWSG-KTVKPVVITD 177
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 125 bits (302), Expect = 2e-29
Identities = 78/165 (47%), Positives = 91/165 (55%), Gaps = 9/165 (5%)
Frame = -3
Query: 557 VSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSKFHRVI 402
V D+ IGD+ +V LF P+T ENF L G G YKGS FHRVI
Sbjct: 9 VFMDVSIGDEPDERMVFELFADVAPRTAENFRALCTGEMGIGQTSKKPLYYKGSLFHRVI 68
Query: 401 KNFMIQXXXXXXXXXXXGRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTV 222
K FM Q G SIYG FEDENF L+H G LSMANAG +TNGSQFFIT
Sbjct: 69 KGFMAQGGDFSNGDGSGGESIYGGTFEDENFVLRHDERGLLSMANAGPNTNGSQFFITFK 128
Query: 221 KTPWLDGRHVVFGKVLEGMDVVQKIE-MTVTGANDRPVKDVVISD 90
LD + VFGK++ G DV+++IE + V GA PV V I D
Sbjct: 129 HNSRLDRKSTVFGKLILGNDVLKRIEYVDVHGAGSTPVVPVRIVD 173
>09_06_0098 +
20850535-20850612,20851258-20851333,20851474-20851521,
20851758-20851781,20851875-20851994,20852235-20852310,
20852385-20852547
Length = 194
Score = 125 bits (301), Expect = 3e-29
Identities = 77/171 (45%), Positives = 99/171 (57%), Gaps = 8/171 (4%)
Frame = -3
Query: 575 PXVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSK 417
P VT++V D++I +IG IVIGL+G VPKT NF L EG G YKGS+
Sbjct: 34 PAVTNRVYLDVEIDGQHIGRIVIGLYGDVVPKTVANFRALCTGEEGIGHKGKSLHYKGSR 93
Query: 416 FHRVIKNFMIQXXXXXXXXXXXGRSIYGERFEDENFKLKHYGAGW-LSMANAGKDTNGSQ 240
FHR+I FMIQ + G+ G G ++MAN+G D+NGSQ
Sbjct: 94 FHRIIPGFMIQGGDI----------VRGD------------GKGSVIAMANSGPDSNGSQ 131
Query: 239 FFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVISDT 87
F+ITT+KT WLDG HVVFG+V++GMD V IE N +P K VVI+D+
Sbjct: 132 FYITTIKTSWLDGEHVVFGRVIQGMDYVYAIEGGAGTYNGKPRKKVVITDS 182
>08_02_1578 -
27992848-27992893,27993431-27993515,27994107-27994240,
27994579-27994640,27994736-27994831,27994952-27995023
Length = 164
Score = 121 bits (291), Expect = 5e-28
Identities = 64/150 (42%), Positives = 92/150 (61%), Gaps = 1/150 (0%)
Frame = -3
Query: 533 DDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXX 354
+ ++G I ++ K PKT NF +L+++ Y FHR+IK+F++Q
Sbjct: 15 ETSMGAFTIEMYYKHAPKTCRNFLELSRRGY---YDNVIFHRIIKDFIVQGGDPTGTGRG 71
Query: 353 XGRSIYGERFEDE-NFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKV 177
SIYG +FEDE +LKH GAG LSMANAG +TNGSQFFIT LDG+H +FG+V
Sbjct: 72 G-ESIYGAKFEDEIRPELKHTGAGILSMANAGPNTNGSQFFITLAPCQSLDGKHTIFGRV 130
Query: 176 LEGMDVVQKIEMTVTGANDRPVKDVVISDT 87
+GM++V+++ T +DRP+ +V I T
Sbjct: 131 SKGMEIVKRLGSVQTDKSDRPIHEVKILRT 160
>06_01_0214 + 1634171-1634173,1634263-1634742
Length = 160
Score = 109 bits (261), Expect = 2e-24
Identities = 61/143 (42%), Positives = 80/143 (55%), Gaps = 1/143 (0%)
Frame = -3
Query: 527 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXG 348
N+G I +F P+T ENF L Y G+ FHR IK FMIQ
Sbjct: 8 NLGDIKCEVFCDQAPRTAENFLALCASGY---YDGTIFHRNIKGFMIQGGDPTGTGKGGT 64
Query: 347 RSIYGERFEDE-NFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLE 171
SI+G++F DE LKH G +SMAN+G +TNGSQFFIT K P L+G + VF KV+
Sbjct: 65 -SIWGKKFADEFRESLKHNARGVMSMANSGPNTNGSQFFITYAKQPHLNGHYTVFAKVIH 123
Query: 170 GMDVVQKIEMTVTGANDRPVKDV 102
G +V+ +E TG DRP+ ++
Sbjct: 124 GFEVLDLMEKAQTGPGDRPLAEI 146
>03_02_0048 -
5265595-5265783,5265882-5265992,5266259-5266547,
5266647-5266903,5266995-5267356,5267447-5267522,
5267618-5267707,5267800-5267891,5267995-5268098,
5268191-5268253,5268609-5268736
Length = 586
Score = 98.7 bits (235), Expect = 3e-21
Identities = 62/160 (38%), Positives = 83/160 (51%), Gaps = 1/160 (0%)
Frame = -3
Query: 521 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXGRS 342
G + + L P+T ENF E Y G FHR IKNFMIQ S
Sbjct: 354 GDLNLELHCDITPRTCENFLTHC---ENGYYNGLIFHRSIKNFMIQGGDPTGTGSGG-ES 409
Query: 341 IYGERFEDE-NFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGM 165
I+G+ F+DE N KL H G G +SMAN+G TNGSQFFI P L+ +H VFG V+ G+
Sbjct: 410 IWGKPFKDELNSKLIHSGRGVVSMANSGPHTNGSQFFILYKSAPHLNFKHTVFGMVVGGL 469
Query: 164 DVVQKIEMTVTGANDRPVKDVVISDTKTEVVAEPFSVTKE 45
+ +E +DRP++++ I K V P++ E
Sbjct: 470 TTLSAMEKVPVDDDDRPLEEIKI--LKVSVFVNPYTEPDE 507
>06_03_1076 +
27409107-27409204,27409731-27409835,27409915-27410032,
27410180-27410230,27410328-27410419,27410558-27410657,
27411018-27411137,27411227-27411295,27411468-27411514,
27411597-27411652,27412293-27412333,27412570-27412675,
27413891-27414023,27414096-27414645
Length = 561
Score = 85.8 bits (203), Expect = 2e-17
Identities = 57/164 (34%), Positives = 85/164 (51%), Gaps = 8/164 (4%)
Frame = -3
Query: 527 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXG 348
++G I + L P TT+NF +L + + Y G FH+V K+F+ Q
Sbjct: 8 SVGDIEVDLHTDMCPLTTKNFLKLCKM---KYYNGCLFHKVEKDFLAQTGDPTGTGAGGD 64
Query: 347 ---RSIYGE--RFEDENFK--LKHYGAGWLSMANAGKDTNGSQFFITTVK-TPWLDGRHV 192
+ +YG+ RF D+ + L+H G ++MA+AG++ N SQF+IT +LD +H
Sbjct: 65 SVYKFLYGDQARFFDDEIRPDLRHSKKGTIAMASAGENCNASQFYITLRDDVDYLDDKHT 124
Query: 191 VFGKVLEGMDVVQKIEMTVTGANDRPVKDVVISDTKTEVVAEPF 60
VFG V EG D + KI T RP KD+ I T V+ +PF
Sbjct: 125 VFGMVAEGFDTLTKISETYVDDKGRPFKDIRIK--HTYVLDDPF 166
>03_06_0417 -
33782577-33782687,33782996-33783052,33783110-33783205,
33783252-33783284,33783543-33783599,33783968-33784060,
33784308-33784395,33784812-33784835,33784956-33785164
Length = 255
Score = 84.6 bits (200), Expect = 5e-17
Identities = 48/103 (46%), Positives = 57/103 (55%), Gaps = 5/103 (4%)
Frame = -3
Query: 557 VSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLA---QKPEG--EGYKGSKFHRVIKNF 393
V FD+ IG G I + LF VPKT ENF Q + G +GYKG +FHRVIK+F
Sbjct: 39 VFFDVTIGSIPAGRIKMELFADIVPKTAENFRQFCTGEHRKSGLPQGYKGCQFHRVIKDF 98
Query: 392 MIQXXXXXXXXXXXGRSIYGERFEDENFKLKHYGAGWLSMANA 264
MIQ SIYG +F+DENF KH G G LSM +
Sbjct: 99 MIQGGDYMKGDGTGCTSIYGTKFDDENFIAKHTGPGLLSMVRS 141
Score = 60.5 bits (140), Expect = 9e-10
Identities = 30/52 (57%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Frame = -3
Query: 242 QFFITTVKTPWLDGRHVVFGKVL-EGMDVVQKIEMTVTGANDRPVKDVVISD 90
QFFIT K WLD +HVVFG+VL +GM V+KIE TG N+RP VIS+
Sbjct: 200 QFFITCAKCEWLDNKHVVFGRVLGDGMLAVRKIENVATGPNNRPKLACVISE 251
>01_05_0478 -
22587881-22588021,22588126-22588266,22588436-22588643,
22589199-22589238,22589425-22589647,22590826-22590970,
22591053-22591156,22591298-22591396,22591506-22591684,
22591948-22592167
Length = 499
Score = 81.0 bits (191), Expect = 6e-16
Identities = 60/158 (37%), Positives = 82/158 (51%), Gaps = 4/158 (2%)
Frame = -3
Query: 521 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXGRS 342
G + I L+ K PK NF QL EG Y G+ FHRVIK+F++Q S
Sbjct: 22 GPLDIELWPKEAPKAVRNFVQLCL--EGY-YDGTLFHRVIKSFLVQGGDPTGSGTGG-ES 77
Query: 341 IYGERFEDE-NFKLKHYGAGWLSMANAGKD-TNGSQFFITTVKTPWLDGRHVVFGKVLEG 168
IYG F DE + +L+ G ++ ANAG +NGSQFFI+ + WLD ++ +FGKV G
Sbjct: 78 IYGAPFADEFHTRLRFNHRGLVACANAGTPHSNGSQFFISLDRCDWLDKKNTIFGKV-TG 136
Query: 167 MDVVQKIEMT--VTGANDRPVKDVVISDTKTEVVAEPF 60
+ + + T +DRPV I EV+ PF
Sbjct: 137 DSIFNLLALADIETDKDDRPVYPQKI--LSVEVLWNPF 172
>06_03_1075 +
27399279-27399376,27399449-27399555,27400791-27400898,
27401763-27401860,27401983-27402033,27402137-27402228,
27402360-27402459,27402765-27402884,27402977-27403045,
27403299-27403345,27403428-27403483,27404760-27404800,
27405155-27405260,27406728-27406860,27406937-27407357
Length = 548
Score = 66.9 bits (156), Expect = 1e-11
Identities = 38/91 (41%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Frame = -3
Query: 326 FEDE-NFKLKHYGAGWLSMANAGKDTNGSQFFITTVK-TPWLDGRHVVFGKVLEGMDVVQ 153
F+DE + +L+H G ++MA+AG++ N SQF+IT +LD +H VFG V EG D +
Sbjct: 108 FDDEIHPELRHSKMGTIAMASAGENCNASQFYITLRDGVDYLDDKHTVFGMVAEGFDTIT 167
Query: 152 KIEMTVTGANDRPVKDVVISDTKTEVVAEPF 60
KI T RP KD+ I T V+ +PF
Sbjct: 168 KINETYVDDKGRPFKDIRI--RHTYVLDDPF 196
>07_03_0359 -
17201711-17201803,17202185-17202332,17202437-17202574,
17204331-17204416,17205233-17205283,17205774-17205858,
17205930-17206081
Length = 250
Score = 54.0 bits (124), Expect = 8e-08
Identities = 37/136 (27%), Positives = 58/136 (42%)
Frame = -3
Query: 521 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXGRS 342
G+I I ++ + F L + +KG F VIKNF+IQ
Sbjct: 103 GSITIEIYKDASADVVDRFVSLCKSNH---FKGMPFRHVIKNFVIQGGDFDFNGAAQEWI 159
Query: 341 IYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMD 162
+ + + KH ++ + G FITT P L+ + VVFG+V+ G D
Sbjct: 160 LKAKASGENALSPKH--EAFMIGTTKNPNNKGFDLFITTAPIPDLNDKLVVFGQVINGQD 217
Query: 161 VVQKIEMTVTGANDRP 114
+VQ+IE T + +P
Sbjct: 218 IVQEIEEVDTDEHYQP 233
>11_06_0322 +
22358505-22358642,22358690-22358791,22359444-22359557,
22359643-22359791,22360155-22360227,22360308-22360397,
22360752-22360791,22361579-22361661,22362614-22362775
Length = 316
Score = 52.0 bits (119), Expect = 3e-07
Identities = 39/134 (29%), Positives = 58/134 (43%), Gaps = 4/134 (2%)
Frame = -3
Query: 521 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXGRS 342
G I G F PKT E+ ++L + Y + F RV K F+ Q
Sbjct: 84 GDIEFGFFPHVAPKTVEHIYKLVRLG---CYNTNHFFRVDKGFVAQVASVVGGRTAPMND 140
Query: 341 IYGERFEDE---NFKLKHYGAGWLSMA-NAGKDTNGSQFFITTVKTPWLDGRHVVFGKVL 174
E E F + G LSM ++ ++ GS F I P LDG++ VFG++
Sbjct: 141 EQQEEAEKSVVGEFSTVKHVRGILSMGRHSDPNSGGSSFSILLGDAPHLDGQYAVFGRLT 200
Query: 173 EGMDVVQKIEMTVT 132
+G D ++K+E T
Sbjct: 201 KGDDTLRKLEQLPT 214
>02_01_0086 + 613113-613532
Length = 139
Score = 50.0 bits (114), Expect = 1e-06
Identities = 38/123 (30%), Positives = 50/123 (40%)
Frame = -3
Query: 503 LFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXGRSIYGERF 324
L+ VP T ENF L K YKG + ++ R
Sbjct: 3 LYADLVPLTAENFRALYTKKPLH-YKGLCLSQHYPRIHVEGRRLRQGPWHRRRVHLRRHL 61
Query: 323 EDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIE 144
+ENF L H WL N + N SQFF + PW DG +VVFG ++ G ++ IE
Sbjct: 62 PNENFLLPH-DRPWLP--NGSAENNISQFF---TRVPWFDGNYVVFGCIISGFHNLKAIE 115
Query: 143 MTV 135
V
Sbjct: 116 AEV 118
>08_02_0053 + 11721658-11721689,11721960-11722710
Length = 260
Score = 45.2 bits (102), Expect = 4e-05
Identities = 37/137 (27%), Positives = 61/137 (44%), Gaps = 18/137 (13%)
Frame = -3
Query: 524 IGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKN-FMIQXXXXXXXXXXXG 348
+G ++ GL+G+ +P TT NF Y+G+ H++++ F +
Sbjct: 127 LGRVIFGLYGRLLPLTTANFKAACTSA---AYRGTLVHKLLQGQFFVAGRQGPRRDRGEV 183
Query: 347 RSIYG-----ERFEDENFKLKHYGAGWLSMANAGKDTNGS----------QFFITTVKTP 213
+ G E + + F+LKH G LS+ D + +F +TT P
Sbjct: 184 QPPTGLVRNAETIDPKAFELKHARPGTLSLCLGQNDDDDDIKLNPNYHNVEFLVTTGPGP 243
Query: 212 W--LDGRHVVFGKVLEG 168
LDG+++VFG VLEG
Sbjct: 244 CPELDGQNIVFGTVLEG 260
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 45.2 bits (102), Expect = 4e-05
Identities = 27/66 (40%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Frame = -3
Query: 557 VSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSKFHRVI 402
V FD+ IG I LF VPKTTENF L G G +KG+ HR++
Sbjct: 10 VFFDIAIGGRAAERITFELFADVVPKTTENFRALCTGERGLGVSTQKPLYFKGTNMHRIL 69
Query: 401 KNFMIQ 384
K FM Q
Sbjct: 70 KGFMAQ 75
Score = 32.3 bits (70), Expect = 0.29
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = -3
Query: 200 RHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVISD 90
+HVVFGKV+ GM +++K+E V +P +V I D
Sbjct: 94 KHVVFGKVVTGMPLLKKLE-AVGSDTGKPTCEVKIVD 129
>01_01_0077 - 585670-585787,585921-586687
Length = 294
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = -3
Query: 251 NGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVT 132
NG++F ITT P LD +V G+V++GMDV+ KI T
Sbjct: 206 NGTEFVITTGDAPELDASALVVGRVVDGMDVLGKIAAVPT 245
>06_01_1095 +
8984363-8984789,8985175-8985416,8985500-8985622,
8985783-8985899,8986258-8986399,8986587-8986627,
8987194-8987453,8987505-8987607,8987698-8987776,
8987856-8988115
Length = 597
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +3
Query: 312 VFIFKTFTIYTAPSSSITLGKITTLDHEIFN---YSVELAPFVPLPLRFLS 455
V + TI A + S+ T LD ++FN +++ PFVPL L+ L+
Sbjct: 132 VVLLNLVTIVFASNISVVKEAETMLDPDLFNVLRFTISAIPFVPLLLKALN 182
>10_01_0310 + 3425099-3425218
Length = 39
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -3
Query: 521 GTIVIGLFGKTVPKTTENF 465
G++VI F VPKTTENF
Sbjct: 8 GSVVIEQFADKVPKTTENF 26
>01_06_0865 - 32567145-32568003,32568123-32568846,32569067-32569151
Length = 555
Score = 27.5 bits (58), Expect = 8.2
Identities = 20/67 (29%), Positives = 30/67 (44%)
Frame = +3
Query: 213 GCLNSCDEKLRSICVFACISHR*PTSTIVLQLEVFIFKTFTIYTAPSSSITLGKITTLDH 392
G L DE C AC+ + + L F F F+ T P+++ TLG DH
Sbjct: 68 GDLREHDEASGRRCSQACLLWTLGLLGLTMFLSTFAF--FSTTTRPAATPTLGGRYYHDH 125
Query: 393 EIFNYSV 413
+ F+ S+
Sbjct: 126 DAFSVSI 132
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,692,752
Number of Sequences: 37544
Number of extensions: 272377
Number of successful extensions: 586
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 561
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1352600424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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