Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_pT_O24
         (745 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC25B8.01 |dap1|SPAC26H5.15|cytochrome P450 regulator Dap1|Sch...    95   9e-21
SPCC1281.06c |||acyl-coA desaturase |Schizosaccharomyces pombe|c...    29   0.70 
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual    27   3.7  
SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces pomb...    26   4.9  

>SPAC25B8.01 |dap1|SPAC26H5.15|cytochrome P450 regulator
           Dap1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 166

 Score = 95.1 bits (226), Expect = 9e-21
 Identities = 47/106 (44%), Positives = 68/106 (64%), Gaps = 5/106 (4%)
 Frame = -1

Query: 490 KDLTVAELKKYDGTQPDGRVLLAVNGIIFDVTRGKRFYGPGGPXSAFAGKDATRGLATGQ 311
           +D T AELK+Y+G++ +  V LA+ G +++VT G +FYGP GP SAFAG DA+RGLA   
Sbjct: 41  RDYTPAELKEYNGSK-NSLVFLAIKGTVYNVTMGSKFYGPQGPYSAFAGHDASRGLAKNS 99

Query: 310 -----VAASENDEYDDVSDXGSDEIASAKEWEEQFREKYDIVGRLL 188
                +  S+ +E DD SD   +E  +  +W+  F +KY  VGRL+
Sbjct: 100 FDDEFIPDSDAEELDDCSDLNDEERQALNDWKAFFDQKYQAVGRLI 145


>SPCC1281.06c |||acyl-coA desaturase |Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 479

 Score = 29.1 bits (62), Expect = 0.70
 Identities = 18/45 (40%), Positives = 24/45 (53%)
 Frame = -1

Query: 448 QPDGRVLLAVNGIIFDVTRGKRFYGPGGPXSAFAGKDATRGLATG 314
           Q   R L+ +NG++ D+T  +   G G   SAF GKDAT     G
Sbjct: 369 QSKTRPLVLINGVVHDMTGFEHPGGQGLLRSAF-GKDATAAFNGG 412


>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1611

 Score = 26.6 bits (56), Expect = 3.7
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = -1

Query: 328 GLATGQVAASENDEYDDVSDXGSDEIASAKEWEEQFREKYD 206
           G + G+++  E DEYDD     SDE+ S     E   E  D
Sbjct: 354 GKSQGEISEQEEDEYDDAE---SDEMHSPYSTHEPESEPED 391


>SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 394

 Score = 26.2 bits (55), Expect = 4.9
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -1

Query: 313 QVAASENDEYDDVSDXGSDEIASAKEWEEQ 224
           Q  +SE+D    +SD   DE  SA E +E+
Sbjct: 218 QSCSSESDRVSQISDDEEDEEGSADEEDEE 247


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,493,641
Number of Sequences: 5004
Number of extensions: 41916
Number of successful extensions: 104
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 102
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 353266144
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)