Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_pT_O22
(666 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyc... 37 0.003
SPBC1348.08c |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 32 0.065
SPAC977.07c |||glycoprotein |Schizosaccharomyces pombe|chr 1|||M... 32 0.065
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 29 0.80
SPBC26H8.13c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 27 1.8
SPBC30D10.17c |||glucan synthase regulator |Schizosaccharomyces ... 27 2.4
SPAC1805.05 |cki3||serine/threonine protein kinase Cki3|Schizosa... 26 4.2
SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 26 4.2
SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces pomb... 26 4.2
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 26 5.6
SPAC7D4.04 |taf1||Taz1 interacting factor 1|Schizosaccharomyces ... 26 5.6
SPBC27B12.06 |gpi13||pig-O |Schizosaccharomyces pombe|chr 2|||Ma... 25 9.8
SPAC3G6.11 |||ATP-dependent DNA helicase Chl1|Schizosaccharomyce... 25 9.8
SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-gluca... 25 9.8
SPAC57A7.08 |pzh1||serine/threonine protein phosphatase Pzh1|Sch... 25 9.8
>SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 630
Score = 36.7 bits (81), Expect = 0.003
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = -3
Query: 613 VYIPDRRRQTLADTXYVPQQXNEV--YYPQQPENPIFSPTQATELADP 476
VY+PD Y+P+ V YYPQQP P+F ++ TEL DP
Sbjct: 497 VYVPDAT-DAAKPQYYIPKDPYPVPHYYPQQPL-PLFDSSEMTELVDP 542
>SPBC1348.08c |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 416
Score = 32.3 bits (70), Expect = 0.065
Identities = 19/68 (27%), Positives = 27/68 (39%)
Frame = +2
Query: 29 FLQKNYNHHLFSPKQLIVSISXXVSGFQFFIRSGSTVGGGVACGDASSTCAVCVGNCGRA 208
F NY F P + +V+ + GF F+ S ST + TC G+
Sbjct: 345 FTVGNYPEGYFLPVRFVVANGAYIGGFDFYFTSDSTGPLATTSYSYTKTCTQQFLPFGQG 404
Query: 209 SGTTCGPT 232
+G GPT
Sbjct: 405 NGGVNGPT 412
>SPAC977.07c |||glycoprotein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 416
Score = 32.3 bits (70), Expect = 0.065
Identities = 19/68 (27%), Positives = 27/68 (39%)
Frame = +2
Query: 29 FLQKNYNHHLFSPKQLIVSISXXVSGFQFFIRSGSTVGGGVACGDASSTCAVCVGNCGRA 208
F NY F P + +V+ + GF F+ S ST + TC G+
Sbjct: 345 FTVGNYPEGYFLPVRFVVANGAYIGGFDFYFTSDSTGPLATTSYSYTKTCTQQFLPFGQG 404
Query: 209 SGTTCGPT 232
+G GPT
Sbjct: 405 NGGVNGPT 412
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 28.7 bits (61), Expect = 0.80
Identities = 18/59 (30%), Positives = 23/59 (38%)
Frame = -1
Query: 288 SHHPECPHPRSSQCSSDGEVGPQVVPEARPQLPTHTAQVEEASPQATPPPTVDPDRMKN 112
SHHP +P C P + P PQ+P+H V SP P P + N
Sbjct: 136 SHHPPLHNPLPVSCQ------PVLRPPPVPQVPSHWYPVSLPSPNLPHQPISKPPVIPN 188
>SPBC26H8.13c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 124
Score = 27.5 bits (58), Expect = 1.8
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = +2
Query: 173 TCAVCVGNCGRASGTTCGPTSPSEEHWE 256
TCA+C+ C + C S E +E
Sbjct: 83 TCAICIRQCHKCESNVCSMCSKQERTFE 110
>SPBC30D10.17c |||glucan synthase regulator |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 504
Score = 27.1 bits (57), Expect = 2.4
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 10/77 (12%)
Frame = -1
Query: 264 PRSSQCSSDG--EVGPQ---VVPEARP-QLPTHTAQVEEASPQAT---PPPTVDP-DRMK 115
P SS S G + P VP ++ +L ++ +++E SP + PPP + R+
Sbjct: 77 PNSSNTSQVGLNNISPAPVGYVPGSKTNELANNSMEMQEISPNGSASLPPPVSESWRRID 136
Query: 114 NWKPETXMEIETMSCFG 64
W E E+ C+G
Sbjct: 137 RWAEENYYELYCQLCYG 153
>SPAC1805.05 |cki3||serine/threonine protein kinase
Cki3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 439
Score = 26.2 bits (55), Expect = 4.2
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 6/43 (13%)
Frame = -1
Query: 240 DGEVGPQVVPEARPQLPTHTAQ------VEEASPQATPPPTVD 130
DG G P+ + Q T +AQ VE+ +PQ T P VD
Sbjct: 366 DGIPGKAASPQVQQQQQTSSAQQQQPQRVEQPAPQTTQPTQVD 408
>SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 412
Score = 26.2 bits (55), Expect = 4.2
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = -1
Query: 648 SPXPHRRLQRARCTYLIVAARPLPIPXTYRNKXTKSITLSNQRTRSS 508
S H + + +++ +P+P YR + TLSN++T S
Sbjct: 45 SQDTHSCASKQDAVFQLLSETKIPVPNRYRKISHRLSTLSNKKTLKS 91
>SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1778
Score = 26.2 bits (55), Expect = 4.2
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 407 SGRRFGSLGNRYQSGGVQFDLFSGVSQFGR 496
+G FG+ N +GG F + SG FG+
Sbjct: 64 NGGLFGNRNNTTTTGGTGFGMSSGTGMFGQ 93
>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
Mok11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2397
Score = 25.8 bits (54), Expect = 5.6
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -1
Query: 126 DRMKNWKPETXMEIETMSC 70
DR++ WKP +++ +SC
Sbjct: 276 DRLREWKPSVASKLKRLSC 294
>SPAC7D4.04 |taf1||Taz1 interacting factor 1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 926
Score = 25.8 bits (54), Expect = 5.6
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 196 LRSGLRDHLRPYLPIRRTLGRTRMWALWVVRS 291
LR+ + L +LP RRT G ++WA + V +
Sbjct: 838 LRNFKQGSLVLFLPTRRTAGNKKVWAAFNVNA 869
>SPBC27B12.06 |gpi13||pig-O |Schizosaccharomyces pombe|chr
2|||Manual
Length = 918
Score = 25.0 bits (52), Expect = 9.8
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 26 AFLQKNYNHHLFSPKQLIVSISXXVSGFQFFIRSGS 133
A L+K Y+H L+S V V +QFF+ S S
Sbjct: 675 ALLEKQYHHVLYSLANTYVICILGVLIWQFFLLSRS 710
>SPAC3G6.11 |||ATP-dependent DNA helicase Chl1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 844
Score = 25.0 bits (52), Expect = 9.8
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 564 YRNKXTKSITLSNQRTRSSAPLKRPNWLT 478
+R+ I L ++ RSS K PNWL+
Sbjct: 789 HRDDYASIILLDSRYNRSSIQRKLPNWLS 817
>SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-glucan
synthase Ags1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 2410
Score = 25.0 bits (52), Expect = 9.8
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = -1
Query: 126 DRMKNWKPETXMEIETMSC 70
DR+++WKP+ ++ +SC
Sbjct: 283 DRLRDWKPDVAEKLMHLSC 301
>SPAC57A7.08 |pzh1||serine/threonine protein phosphatase
Pzh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 515
Score = 25.0 bits (52), Expect = 9.8
Identities = 9/29 (31%), Positives = 13/29 (44%)
Frame = -3
Query: 556 QXNEVYYPQQPENPIFSPTQATELADPTE 470
+ N YPQ + P+ P A DP +
Sbjct: 155 EHNGPVYPQDQQGPVIIPNSAISSTDPDD 183
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,317,603
Number of Sequences: 5004
Number of extensions: 42579
Number of successful extensions: 131
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 131
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 303841898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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