Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_pT_O16
         (793 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z67734-2|CAA91528.2|  247|Caenorhabditis elegans Hypothetical pr...    32   0.54 
CU457740-6|CAM36336.1|  365|Caenorhabditis elegans Hypothetical ...    29   3.8  
U64857-14|AAL16313.1|  402|Caenorhabditis elegans Hypothetical p...    29   5.0  
U64857-13|AAC25859.2|  436|Caenorhabditis elegans Hypothetical p...    29   5.0  
U64857-12|AAN84849.1|  413|Caenorhabditis elegans Hypothetical p...    29   5.0  

>Z67734-2|CAA91528.2|  247|Caenorhabditis elegans Hypothetical
           protein B0198.2 protein.
          Length = 247

 Score = 31.9 bits (69), Expect = 0.54
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +2

Query: 41  HVSHHSCXSKHAINPSRCVLTPYYMYRLNASSHTTHRNHDG 163
           H+++H   S    +P   +   Y  Y  N S+H+ H NH G
Sbjct: 175 HMNNHKNSSSPRRSPRPSIYNTYSNYSSNPSNHSGHSNHSG 215


>CU457740-6|CAM36336.1|  365|Caenorhabditis elegans Hypothetical
           protein C50E10.6 protein.
          Length = 365

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 12/54 (22%), Positives = 30/54 (55%)
 Frame = -3

Query: 383 IEQ*CSVFFLNKLIRQSFKSVYLLMVYLLSRKF*LLKIWYAIFYFTLSVVKVIS 222
           +E+ C+V+F+     ++   +YLL   ++ ++F ++   Y +FY  L  +  ++
Sbjct: 148 LERLCAVYFIENY--ENLPRIYLLFFLIIFQQFLIITAVYFLFYNRLKFIPAVT 199


>U64857-14|AAL16313.1|  402|Caenorhabditis elegans Hypothetical
           protein C37C3.2b protein.
          Length = 402

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = +2

Query: 74  AINPSRCVLTPYYMYRLNASSHTTHRNHDGFFNVVDSASFTFKMLSNP 217
           A+N +R V  P+Y Y++   S       +G   V+ + S   K L  P
Sbjct: 2   ALNVNRAVADPFYRYKMPKLSAKVEGKGNGIKTVISNMSEIAKALERP 49


>U64857-13|AAC25859.2|  436|Caenorhabditis elegans Hypothetical
           protein C37C3.2a protein.
          Length = 436

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = +2

Query: 74  AINPSRCVLTPYYMYRLNASSHTTHRNHDGFFNVVDSASFTFKMLSNP 217
           A+N +R V  P+Y Y++   S       +G   V+ + S   K L  P
Sbjct: 2   ALNVNRAVADPFYRYKMPKLSAKVEGKGNGIKTVISNMSEIAKALERP 49


>U64857-12|AAN84849.1|  413|Caenorhabditis elegans Hypothetical
           protein C37C3.2c protein.
          Length = 413

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = +2

Query: 74  AINPSRCVLTPYYMYRLNASSHTTHRNHDGFFNVVDSASFTFKMLSNP 217
           A+N +R V  P+Y Y++   S       +G   V+ + S   K L  P
Sbjct: 2   ALNVNRAVADPFYRYKMPKLSAKVEGKGNGIKTVISNMSEIAKALERP 49


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,521,394
Number of Sequences: 27780
Number of extensions: 278928
Number of successful extensions: 627
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 627
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)