Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_pT_O14
(603 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0992 + 25083397-25083537,25084198-25084228,25084971-250851... 54 1e-07
06_01_0579 + 4099039-4099086,4099798-4099848,4100151-4100286,410... 47 1e-05
12_02_0498 + 19721038-19721178,19721376-19721472,19721576-197216... 37 1e-05
03_02_0490 - 8840577-8840914,8841009-8841067,8841168-8841283,884... 46 2e-05
03_05_0383 + 23656041-23656096,23657189-23657255,23657599-236577... 42 4e-04
10_08_0547 - 18682357-18682683,18682971-18683060,18683279-186833... 36 0.033
04_04_0611 - 26594737-26594991,26595307-26595396,26595490-265955... 34 0.100
03_02_0476 + 8768182-8768313,8768734-8768833,8768949-8768986,876... 34 0.100
02_05_0094 - 25758213-25758479,25758886-25758975,25759090-257591... 34 0.100
06_01_0228 - 1736373-1736721,1739915-1740120,1740513-1740844,174... 32 0.40
04_01_0204 + 2467657-2467781,2467955-2468044,2469071-2469169,246... 30 1.6
02_05_0093 + 25753021-25753061,25753159-25753402,25753843-257539... 29 2.8
06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,713... 29 3.7
12_02_0842 - 23588826-23589198,23589548-23590203 28 5.0
03_05_0768 + 27575303-27575980,27576427-27576543 28 5.0
12_02_0848 + 23636478-23638058 28 6.5
12_01_1096 + 11494100-11494263,11494489-11494633,11494694-11494741 28 6.5
01_06_1315 + 36226262-36226533,36227946-36228060,36228710-362287... 28 6.5
01_05_0216 + 19386132-19386314,19386794-19388092,19388440-19388667 28 6.5
09_06_0373 + 22632638-22633195,22633279-22633485,22633583-226337... 27 8.7
08_02_0212 + 14342316-14342686,14343471-14343521,14345812-14346940 27 8.7
06_03_0028 + 15659824-15661266 27 8.7
>12_02_0992 +
25083397-25083537,25084198-25084228,25084971-25085139,
25085228-25085291,25085408-25085474,25086543-25086586,
25086835-25086922,25087079-25087238,25087659-25087779,
25087859-25087942,25088043-25088162,25088689-25088901,
25088995-25089054,25089144-25089262,25089407-25089465,
25089585-25089919
Length = 624
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = -1
Query: 528 SPRCAYCNGPI-LDKCVTALEKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRADYFDMF 352
S CA C PI + ++ ++ WH + F C C + E F + +PY ++ Y D F
Sbjct: 254 SRTCAGCKNPIGHGRFLSCMDSVWHPQCFRCFACNKPISEYEFAMHEDQPYHKSCYKDFF 313
Query: 351 APKCGGCNKPIMENYISALNTQWHP 277
PKC C I N + + HP
Sbjct: 314 HPKCDVCKNFIPTNRNGLIEYRAHP 338
Score = 47.2 bits (107), Expect = 1e-05
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = -1
Query: 342 CGGCNKPIMEN-YISALNTQWHPDCFVCKDCQNPVKGKSFYAMEGKPVCPTC 190
C GC PI ++S +++ WHP CF C C P+ F E +P +C
Sbjct: 257 CAGCKNPIGHGRFLSCMDSVWHPQCFRCFACNKPISEYEFAMHEDQPYHKSC 308
>06_01_0579 +
4099039-4099086,4099798-4099848,4100151-4100286,
4100287-4100401,4100496-4100528,4101037-4101166,
4101663-4101751,4102042-4102148,4102238-4102309,
4102384-4102764,4104907-4105064,4105581-4105674,
4106082-4106089,4106297-4106387,4107136-4107289,
4108257-4108377,4108468-4108551,4108946-4109065,
4109181-4109393,4109482-4109544,4109668-4109783,
4110132-4110190,4111126-4111445
Length = 920
Score = 47.2 bits (107), Expect = 1e-05
Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 1/118 (0%)
Frame = -1
Query: 519 CAYCNGPI-LDKCVTALEKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRADYFDMFAPK 343
CA C+ I + ++ + WH E F C C Q + F PY + Y + F PK
Sbjct: 558 CAGCHSEIGHGRFLSCMGAVWHPECFRCHACNQPIYDYEFSMSGNHPYHKTCYKERFHPK 617
Query: 342 CGGCNKPIMENYISALNTQWHPDCFVCKDCQNPVKGKSFYAMEGKPVCPTCVGVDDDE 169
C C + I N + + HP ++ K C + + ++G P C +C ++ E
Sbjct: 618 CDVCKQFIPTNMNGLIEYRAHP-FWLQKYCPS-------HEVDGTPRCCSCERMEPRE 667
>12_02_0498 +
19721038-19721178,19721376-19721472,19721576-19721619,
19722120-19722203,19722441-19722662
Length = 195
Score = 36.7 bits (81), Expect(2) = 1e-05
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -1
Query: 345 KCGGCNKPIME-NYISALNTQWHPDCFVCKDCQNPVKGKSFYAMEGKPVC 199
KC GCNK + ++ NT +H CF C + ++ A EGK C
Sbjct: 109 KCVGCNKTVYPIERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYC 158
Score = 29.5 bits (63), Expect(2) = 1e-05
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = -1
Query: 522 RCAYCNGPI--LDKCVTALEKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRADYFDMFA 349
+C C+ + +DK +TA + +H F C C ++ +G YCR +FD
Sbjct: 11 KCMACDKTVYLVDK-LTADNRVYHKACFRCHHCKGTLKLANYNSFEGVLYCR-PHFDQLF 68
Query: 348 PKCGGCNK 325
+ G +K
Sbjct: 69 KRTGSLDK 76
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/61 (22%), Positives = 23/61 (37%), Gaps = 1/61 (1%)
Frame = -1
Query: 522 RCAYCNGPILD-KCVTALEKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRADYFDMFAP 346
+C CN + + VT +H F C G + +GK YC+ + +
Sbjct: 109 KCVGCNKTVYPIERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKE 168
Query: 345 K 343
K
Sbjct: 169 K 169
>03_02_0490 -
8840577-8840914,8841009-8841067,8841168-8841283,
8841578-8841640,8841826-8842038,8842211-8842330,
8842453-8842578,8842593-8842749,8842830-8842962,
8843054-8843138,8843305-8843421
Length = 508
Score = 46.0 bits (104), Expect = 2e-05
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = -1
Query: 342 CGGCNKPIME-NYISALNTQWHPDCFVCKDCQNPVK 238
CGGC I +Y+S L WHP CF C C++P++
Sbjct: 114 CGGCKHEIGHGHYLSCLGMYWHPQCFRCSSCRHPIR 149
Score = 32.7 bits (71), Expect = 0.23
Identities = 21/82 (25%), Positives = 32/82 (39%)
Frame = -1
Query: 522 RCAYCNGPILDKCVTALEKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRADYFDMFAPK 343
RC+ C PI + VT L+ + F + F PY + Y ++ PK
Sbjct: 140 RCSSCRHPIREMEVTFLQFSLECLKVFSGSDSLLYSVSQFTLLGTDPYHKLCYKELHHPK 199
Query: 342 CGGCNKPIMENYISALNTQWHP 277
C C + I N + + HP
Sbjct: 200 CDVCLQFIPTNRTGLIEYRAHP 221
>03_05_0383 +
23656041-23656096,23657189-23657255,23657599-23657745,
23658094-23658178,23658380-23658551,23660056-23660176,
23660431-23660550,23660861-23661073,23661154-23661213,
23661306-23661424,23661609-23661667,23661798-23662132
Length = 517
Score = 41.9 bits (94), Expect = 4e-04
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -1
Query: 342 CGGCNKPIMEN-YISALNTQWHPDCFVCKDCQNPV 241
C GC PI + ++S +++ WHP CF C C P+
Sbjct: 178 CAGCKTPIGQGRFLSCMDSVWHPQCFRCFACDRPI 212
Score = 32.7 bits (71), Expect = 0.23
Identities = 32/122 (26%), Positives = 48/122 (39%), Gaps = 5/122 (4%)
Frame = -1
Query: 519 CAYCNGPI-LDKCVTALEKTWHTEHFFCAQCGQQFGE-EGFHERDGKPYCRADYFDMFAP 346
CA C PI + ++ ++ WH + F C C + E E +DG RA F
Sbjct: 178 CAGCKTPIGQGRFLSCMDSVWHPQCFRCFACDRPISEYEIPTNKDGHIEYRAHPF----- 232
Query: 345 KCGGCNKPIMENYISALNTQWHPDCFVCKDCQNPVKGKSFYAMEGKPVCPTCVG---VDD 175
M+ Y A T P C C+ + P K +G+ +C C+ +D
Sbjct: 233 --------WMQKYCPAHETDRTPRCCSCERME-PKDSKYITLDDGRKLCLECLNTSIMDT 283
Query: 174 DE 169
DE
Sbjct: 284 DE 285
>10_08_0547 -
18682357-18682683,18682971-18683060,18683279-18683301,
18683397-18683496,18683615-18683749
Length = 224
Score = 35.5 bits (78), Expect = 0.033
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -1
Query: 345 KCGGCNKPI-MENYISALNTQWHPDCFVCKDCQNPVKGKSFYAMEGKPVCPT 193
KC C+K + + ++A + +H CF C C+ + S+ +M+G C T
Sbjct: 9 KCNACDKTVHFIDLLTADSIPYHKSCFRCSHCKGTLSMCSYSSMDGVLYCKT 60
>04_04_0611 -
26594737-26594991,26595307-26595396,26595490-26595515,
26595603-26595702,26595820-26595954
Length = 201
Score = 33.9 bits (74), Expect = 0.100
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = -1
Query: 345 KCGGCNKPI-MENYISALNTQWHPDCFVCKDCQNPVKGKSFYAMEGKPVCPT 193
KC C+K + + ++A +H CF C C+ + S+ +M+G C T
Sbjct: 9 KCTACDKTVHFIDLLTADGVPYHKTCFKCSHCKGILSMCSYSSMDGVLYCKT 60
>03_02_0476 +
8768182-8768313,8768734-8768833,8768949-8768986,
8769102-8769191,8769465-8769695
Length = 196
Score = 33.9 bits (74), Expect = 0.100
Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -1
Query: 345 KCGGCNKPIME-NYISALNTQWHPDCFVCKDCQNPVKGKSFYAMEGKPVC 199
KC C K + + +S +H CF C+ C++ + ++ ++EG P C
Sbjct: 8 KCKVCTKTVYPMDQLSTDGVVFHRSCFKCQHCKSTLSLGNYSSIEGVPYC 57
>02_05_0094 -
25758213-25758479,25758886-25758975,25759090-25759118,
25759208-25759307,25759411-25759545
Length = 206
Score = 33.9 bits (74), Expect = 0.100
Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = -1
Query: 345 KCGGCNKPI-MENYISALNTQWHPDCFVCKDCQNPVKGKSFYAMEGKPVCPT 193
KC C+K + + ++A +H CF C C+ + ++ +M+G C T
Sbjct: 9 KCKACDKTVHFIDLLTADGVSYHKTCFKCSHCKGTLSMCNYSSMDGVLYCKT 60
>06_01_0228 -
1736373-1736721,1739915-1740120,1740513-1740844,
1740935-1741499
Length = 483
Score = 31.9 bits (69), Expect = 0.40
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +1
Query: 289 GVER*DIVFHYGFIATTAFWGEHV 360
GVE D+VF +GFI+++ FW E V
Sbjct: 190 GVETEDVVFVHGFISSSVFWTETV 213
>04_01_0204 +
2467657-2467781,2467955-2468044,2469071-2469169,
2469353-2469371,2469965-2470021,2470585-2471265,
2471639-2471742,2471919-2472057,2472173-2472334,
2472565-2472681
Length = 530
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = -1
Query: 504 GPILDKCVTALEKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRADYFD 358
G +D C + WH A CG FG RDGK Y D D
Sbjct: 162 GNPIDDCWRC-DPDWHKNRQRLADCGIGFGRNAIGGRDGKIYVVTDPSD 209
>02_05_0093 +
25753021-25753061,25753159-25753402,25753843-25753905,
25753985-25754179,25754489-25754893
Length = 315
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = -2
Query: 245 PSKGSPSMPWKGSRYAQHALESMMMNKECLRMTSPLRTNAL-PNFLQLCSNISKGMQT 75
P++ +K S+ QHA ++ K +SPLR N + P +++ + G T
Sbjct: 225 PARADAFAAYKTSKALQHAYTRVLARKHASSSSSPLRVNCVHPGYVKTDMTLGTGELT 282
>06_01_0926 -
7139220-7139318,7139394-7139478,7139573-7139643,
7139996-7140076,7140805-7140895,7141242-7141330,
7141749-7141802,7141906-7142085,7142175-7142237,
7142575-7142705,7142807-7142900,7143343-7143684,
7143957-7144348,7145010-7148487,7149101-7149187,
7149324-7149367,7149495-7149591,7150429-7150572
Length = 1873
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/50 (24%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -1
Query: 345 KCGGCNKPIME-NYISALNTQWHPDCFVCKDCQNPVKGKSFYAMEGKPVC 199
KC C + + ++A +H CF C C+ ++ ++ ++EG C
Sbjct: 12 KCDSCGRTVYPVEELAADGRVYHRPCFRCTHCKATLQFSNYSSVEGVLYC 61
>12_02_0842 - 23588826-23589198,23589548-23590203
Length = 342
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = -2
Query: 329 INP*WKTISQRSTPSGIQTVSFARTARIPSKGSPSMPWKGSRYAQHALESMMMNKECLR 153
I P W + S S+ S T+S A A P+ +P W G + + +M EC R
Sbjct: 164 ILPPWMSSSPSSSSSPSVTLSLASAAVAPAPAAPPPTWGGGGGGEVVVAELM---ECCR 219
>03_05_0768 + 27575303-27575980,27576427-27576543
Length = 264
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = -3
Query: 322 HNGKLYLSA--QHPVASRLFRLQGLPESRQREV 230
H GKL + A Q P SR GLPE +RE+
Sbjct: 153 HEGKLAVPAPEQEPATSRSAAFAGLPEMERREL 185
>12_02_0848 + 23636478-23638058
Length = 526
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +3
Query: 120 GEGIRSEWGGHSKAFLIHHHRLQRMLGIPASLPWHRRTSL 239
G G S+WG S+ L+ L I AS PWHRRT +
Sbjct: 250 GGGEGSQWG--SRLLLLPEAMNMTALVIEAS-PWHRRTDV 286
>12_01_1096 + 11494100-11494263,11494489-11494633,11494694-11494741
Length = 118
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 158 GIPYSSSSTPT-HVGHTGFPSMA*KDFPLTGFWQSLQTKQ 274
G YSS P + TGF ++ PLT W + QTK+
Sbjct: 65 GFGYSSMMHPNVEITRTGFRAVTTCRLPLTNPWDTQQTKE 104
>01_06_1315 +
36226262-36226533,36227946-36228060,36228710-36228752,
36229953-36230329,36230330-36230481,36230591-36230838,
36230919-36231047,36231130-36231739,36231842-36232086,
36232195-36232325
Length = 773
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +3
Query: 114 KIGEGIRSEWGGHSKAFLIHHHRLQRMLGIPASLPWHRRTSL*RDSGSPCKRN 272
K+ G R+ W GH K L + + PA P H +S S SPC+R+
Sbjct: 179 KLRPGSRTAWAGHPKWALPVAYEM------PAPPPPHAASSPPLPSSSPCRRS 225
>01_05_0216 + 19386132-19386314,19386794-19388092,19388440-19388667
Length = 569
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -1
Query: 492 DKCVTALEKTWHTEHFFCAQCGQQF 418
D C L K T+H C +CGQ F
Sbjct: 441 DGCGVVLRKEEATDHVHCNKCGQAF 465
>09_06_0373 +
22632638-22633195,22633279-22633485,22633583-22633798,
22635375-22635441,22635531-22635677,22635811-22635906,
22636530-22636642,22636732-22636868,22637096-22637336
Length = 593
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 157 RHSLFIIIDSNACWAYRLPFHG 222
R LF++IDSNA ++++ F G
Sbjct: 413 RRPLFLVIDSNASYSFKAGFSG 434
>08_02_0212 + 14342316-14342686,14343471-14343521,14345812-14346940
Length = 516
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/62 (25%), Positives = 26/62 (41%)
Frame = -2
Query: 431 AVSNLGKRVSMKGTGSPTAGLITLTCSPQNAVVAINP*WKTISQRSTPSGIQTVSFARTA 252
A +N G V ++ + C+P+ A A+ W T+S P+ + V R
Sbjct: 2 AAANAGAMVRFVAAFLAAVLVMMVPCAPRAAAAAVGVNWGTVSAHRMPAPV-VVELMRAN 60
Query: 251 RI 246
RI
Sbjct: 61 RI 62
>06_03_0028 + 15659824-15661266
Length = 480
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +1
Query: 358 VKVISPAVGLPVPFMETLFPKLLTALSAKEVLRVPRFL*SCD 483
V V++ AV L PF ET+ + L AL A R+P F S D
Sbjct: 354 VTVVTTAVNLGAPFAETVALRGLVALYAGLGQRLPLFDNSMD 395
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,895,531
Number of Sequences: 37544
Number of extensions: 440357
Number of successful extensions: 1161
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1157
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1431112012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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