Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_pT_O11
(389 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1539.06 |||acyl-coenzyme A binding protein |Schizosaccharomy... 69 2e-13
SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces ... 26 1.8
SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit Smc6|Schizosac... 26 2.4
SPBC13A2.02 |||nucleoporin Nup82|Schizosaccharomyces pombe|chr 2... 26 2.4
SPBC21H7.03c |||acid phosphatase |Schizosaccharomyces pombe|chr ... 25 3.1
SPBC27B12.11c |||transcription factor |Schizosaccharomyces pombe... 25 3.1
SPAC4G9.17c |mrps5||mitochondrial ribosomal protein subunit S5|S... 25 4.1
SPBC342.02 |||glutaminyl-tRNA synthetase |Schizosaccharomyces po... 25 4.1
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 25 5.5
SPBC609.01 |||ribonuclease II |Schizosaccharomyces pombe|chr 2||... 25 5.5
SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces pom... 24 7.2
SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces p... 24 7.2
SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1 |Sc... 24 7.2
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 24 7.2
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 24 7.2
SPAC2E1P5.01c |mns1|SPAPB1E7.13c|mannosyl-oligosaccharide 1,2-al... 24 9.5
SPCC1450.11c |cek1||serine/threonine protein kinase Cek1|Schizos... 24 9.5
SPAC5D6.07c |||PXA domain protein|Schizosaccharomyces pombe|chr ... 24 9.5
>SPBC1539.06 |||acyl-coenzyme A binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 87
Score = 69.3 bits (162), Expect = 2e-13
Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Frame = -2
Query: 313 LDEQFKQVADKVRNWKTKPSDDENLALYSLYKQATIGDVNIAQPSGLVE---SAKWKAWN 143
+ F+Q A V+ K P+ DE L LY+L+KQAT+GD N +P GL++ KW AW
Sbjct: 1 MSSTFEQAAADVKELKETPNSDELLKLYALFKQATVGDNNTEKP-GLLDLKGKFKWNAWE 59
Query: 142 SRKGISQDDAKKQYIENAEKLHSK 71
KG S++DA +YI ++L +K
Sbjct: 60 ELKGKSKEDAASEYISFVDELKTK 83
>SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 557
Score = 26.2 bits (55), Expect = 1.8
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 189 AMLTSPMVACLYREYSARFSSSLGLVFQFLTLSA 290
AML+SP + ++YS F S ++ Q L ++A
Sbjct: 73 AMLSSPFTEAIGKKYSIAFFSGCYIIGQILLVTA 106
>SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit
Smc6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1140
Score = 25.8 bits (54), Expect = 2.4
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = -2
Query: 148 WNSRKGISQDDAKKQYIENAEKLHSKRRI 62
W +R G+S + A + Y+ NA++ H + ++
Sbjct: 929 WRNRTGVSVEQAAEDYL-NAKEKHDQAKV 956
>SPBC13A2.02 |||nucleoporin Nup82|Schizosaccharomyces pombe|chr
2|||Manual
Length = 803
Score = 25.8 bits (54), Expect = 2.4
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = -2
Query: 277 RNWKTKPSDDENLALYSLYKQATIGDVNIAQPSG 176
RNW+T DD +LA + K++ +++ ++ G
Sbjct: 531 RNWQTTVFDDSDLATMGVNKESLSNEMDYSKSLG 564
>SPBC21H7.03c |||acid phosphatase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 25.4 bits (53), Expect = 3.1
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -2
Query: 232 YSLYKQATIGDVNIAQPSGLVESAKW 155
Y L+ + + D+N A+ +VESAKW
Sbjct: 150 YKLF-DSYVYDINTAEQERVVESAKW 174
>SPBC27B12.11c |||transcription factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 738
Score = 25.4 bits (53), Expect = 3.1
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -2
Query: 289 ADKVRNWKTKPSDDENLALYSLYK 218
A+ V NW + +D ENL++ S ++
Sbjct: 526 AENVNNWMLETNDHENLSMQSHFE 549
>SPAC4G9.17c |mrps5||mitochondrial ribosomal protein subunit
S5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 387
Score = 25.0 bits (52), Expect = 4.1
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +3
Query: 144 FHAFHLALSTRPLGWAMLTSPMV 212
FHA L L +RP G+ + +P++
Sbjct: 304 FHAVRLTLRSRPAGFGLRCNPIL 326
>SPBC342.02 |||glutaminyl-tRNA synthetase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 811
Score = 25.0 bits (52), Expect = 4.1
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 194 HCPAQRSCGERQVEGMEQSQRHLPRRCQE 108
+CPAQR G V G S+R + + +E
Sbjct: 486 YCPAQREYGRLNVVGTLMSKRKIMKLVKE 514
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 24.6 bits (51), Expect = 5.5
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +2
Query: 206 YGSLLVQGVQRKVLIVTGLGLPVPNLIGDLFELLVERHFVLSFEIRR 346
+ +L + + I+ + P+L+ F LLV+ VL FE +R
Sbjct: 2805 FKTLFISFTEEHRKIINMMVFTTPSLMSGSFSLLVKNPKVLEFENKR 2851
>SPBC609.01 |||ribonuclease II |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1157
Score = 24.6 bits (51), Expect = 5.5
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = -3
Query: 180 AVLWRAPSGR--HGTVAKASPKTMPRSNTSKMRRNST 76
AVL R PSG GT+A P ++ N S RRNS+
Sbjct: 453 AVLNR-PSGETCSGTLALYRPNSLALKNQSSHRRNSS 488
>SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 772
Score = 24.2 bits (50), Expect = 7.2
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -2
Query: 352 TLPPDLKR*HKMSLDEQFKQVADKVRNWKTKPSDDENL 239
T PP ++ K LD K++ D+ + +PS D L
Sbjct: 360 TQPPSMRNDWKDYLDNNSKEILDQFGFLQKRPSHDTPL 397
>SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 555
Score = 24.2 bits (50), Expect = 7.2
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 189 AMLTSPMVACLYREYSARFSSSLGLVFQFLTLSA 290
AML+SP + ++YS F S + ++ + L ++A
Sbjct: 73 AMLSSPFTERIGKKYSICFFSGVYIIAELLLVTA 106
>SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1573
Score = 24.2 bits (50), Expect = 7.2
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +2
Query: 200 ITYGSLLVQGVQRKVLIVTGLGLPVPNLIGDLFELLVERHFVLS 331
I +G + G+ ++ + LG+ PN +G L + LV + +S
Sbjct: 285 ILHGECVAIGMVKEAELARYLGILKPNAVGRLTKCLVSYNLPIS 328
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 24.2 bits (50), Expect = 7.2
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = -3
Query: 387 NELTVPIGTLQLPYLLISKDNTKCLSTSNSNRSPI-RLGTGRPSPVTMRTLRCTPCTSRL 211
N+LT + P DN + T + I + G R +P + TL TP TSRL
Sbjct: 445 NKLTASKEQIASPKRPGPSDNGNEIPTKFVQKVTITKEGKKRVAPQLLTTLSATPSTSRL 504
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 24.2 bits (50), Expect = 7.2
Identities = 9/22 (40%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Frame = +3
Query: 72 LEWSFSAFS-MYCFLASSWEMP 134
L W + + +YCF SSW+ P
Sbjct: 4047 LSWLHATLAEIYCFTCSSWKEP 4068
>SPAC2E1P5.01c |mns1|SPAPB1E7.13c|mannosyl-oligosaccharide
1,2-alpha-mannosidase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 521
Score = 23.8 bits (49), Expect = 9.5
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -2
Query: 319 MSLDEQFKQVADKVRNWKTKPSDDENLALY 230
M LDEQ + + V N T DDE ++++
Sbjct: 100 MGLDEQVLRAREWVNNSLTWNQDDEEVSVF 129
>SPCC1450.11c |cek1||serine/threonine protein kinase
Cek1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1338
Score = 23.8 bits (49), Expect = 9.5
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = -3
Query: 330 DNTKCLSTSNSNRSPIRLGTGRPSPVTMRTLRCTPCTSRLP*VMLTLPSPA 178
D+ K LS ++S R G RP+ +L S L V L LPSP+
Sbjct: 519 DDLKYLSPNSSPRFVASDGPNRPASNGRSSLFSRGRASNLGDVGLRLPSPS 569
>SPAC5D6.07c |||PXA domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 495
Score = 23.8 bits (49), Expect = 9.5
Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 2/107 (1%)
Frame = -3
Query: 378 TVPIGTLQLPYLLISKDNTKCLSTSNSNRSPIRLGTGRPSPVTMRTLRCTPCTSRLP*VM 199
++PI + P L +SK +T T + + L T +PV + +P +SR +
Sbjct: 338 SIPITSNPPPMLNLSKGSTSVEPTFCETNASVALSTVTSTPVF--STDSSPLSSRTRENL 395
Query: 198 LTLPSPAVL--WRAPSGRHGTVAKASPKTMPRSNTSKMRRNSTPKDA 64
L+L AV +A + + + + PK S T +T K A
Sbjct: 396 LSLIPSAVSSPTKANTNKSHQRSFSIPKATKDSQTPSENSAATLKQA 442
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,762,650
Number of Sequences: 5004
Number of extensions: 37723
Number of successful extensions: 129
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 128
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 128029482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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