BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_pT_O02
(544 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY226553-1|AAO47379.1| 606|Drosophila melanogaster pickpocket 2... 31 1.3
AY226552-1|AAO47378.1| 632|Drosophila melanogaster pickpocket 2... 31 1.3
AE014298-2487|AAF48671.3| 606|Drosophila melanogaster CG4805-PA... 31 1.3
AE014298-2486|AAX52502.1| 632|Drosophila melanogaster CG4805-PB... 31 1.3
AY047511-1|AAK77243.1| 476|Drosophila melanogaster GH01761p pro... 30 1.8
AE014297-817|AAO41519.1| 476|Drosophila melanogaster CG33191-PA... 30 1.8
AY226542-1|AAO47368.1| 516|Drosophila melanogaster pickpocket 1... 28 7.2
AY094744-1|AAM11097.1| 790|Drosophila melanogaster GM01751p pro... 28 7.2
AE014134-1695|AAF52812.2| 516|Drosophila melanogaster CG34058-P... 28 7.2
AE013599-3404|AAF46853.2| 2733|Drosophila melanogaster CG4554-PA... 28 7.2
>AY226553-1|AAO47379.1| 606|Drosophila melanogaster pickpocket 28
short form protein.
Length = 606
Score = 30.7 bits (66), Expect = 1.3
Identities = 35/148 (23%), Positives = 60/148 (40%), Gaps = 4/148 (2%)
Frame = -1
Query: 442 NCSFCSPSSL*LWQDLNRSTLVTATTITDIRIQATSVIPDTV-PWPMDRTVAMLPLHXXX 266
+C C P L R+TL TA+ ++D R QA +P+ + P + LH
Sbjct: 409 SCENCWPGCFELTY---RATLSTASIVSDPRFQAGENLPEYIFHGPYSNASEISILHF-- 463
Query: 265 XXXXXTN*YFLKHLCY*FNKNILKNIMILLFISFEILINNFRGLLSIYKXAFVF---ECF 95
Y++ NI ++ F ++N GLL ++ +F E F
Sbjct: 464 --------YYMT--------NIFRSTTKSEMFGFTEFLSNTGGLLGLFMGFSIFSVIEIF 507
Query: 94 FFSCQLPFCECLQIRXQEVRIMNRFSYL 11
F+ P+C +R + R + + S+L
Sbjct: 508 FYITVRPYCASRTLRQRHKRRLEQLSWL 535
>AY226552-1|AAO47378.1| 632|Drosophila melanogaster pickpocket 28
long form protein.
Length = 632
Score = 30.7 bits (66), Expect = 1.3
Identities = 35/148 (23%), Positives = 60/148 (40%), Gaps = 4/148 (2%)
Frame = -1
Query: 442 NCSFCSPSSL*LWQDLNRSTLVTATTITDIRIQATSVIPDTV-PWPMDRTVAMLPLHXXX 266
+C C P L R+TL TA+ ++D R QA +P+ + P + LH
Sbjct: 435 SCENCWPGCFELTY---RATLSTASIVSDPRFQAGENLPEYIFHGPYSNASEISILHF-- 489
Query: 265 XXXXXTN*YFLKHLCY*FNKNILKNIMILLFISFEILINNFRGLLSIYKXAFVF---ECF 95
Y++ NI ++ F ++N GLL ++ +F E F
Sbjct: 490 --------YYMT--------NIFRSTTKSEMFGFTEFLSNTGGLLGLFMGFSIFSVIEIF 533
Query: 94 FFSCQLPFCECLQIRXQEVRIMNRFSYL 11
F+ P+C +R + R + + S+L
Sbjct: 534 FYITVRPYCASRTLRQRHKRRLEQLSWL 561
>AE014298-2487|AAF48671.3| 606|Drosophila melanogaster CG4805-PA,
isoform A protein.
Length = 606
Score = 30.7 bits (66), Expect = 1.3
Identities = 35/148 (23%), Positives = 60/148 (40%), Gaps = 4/148 (2%)
Frame = -1
Query: 442 NCSFCSPSSL*LWQDLNRSTLVTATTITDIRIQATSVIPDTV-PWPMDRTVAMLPLHXXX 266
+C C P L R+TL TA+ ++D R QA +P+ + P + LH
Sbjct: 409 SCENCWPGCFELTY---RATLSTASIVSDPRFQAGENLPEYIFHGPYSNASEISILHF-- 463
Query: 265 XXXXXTN*YFLKHLCY*FNKNILKNIMILLFISFEILINNFRGLLSIYKXAFVF---ECF 95
Y++ NI ++ F ++N GLL ++ +F E F
Sbjct: 464 --------YYMT--------NIFRSTTKSEMFGFTEFLSNTGGLLGLFMGFSIFSVIEIF 507
Query: 94 FFSCQLPFCECLQIRXQEVRIMNRFSYL 11
F+ P+C +R + R + + S+L
Sbjct: 508 FYITVRPYCASRTLRQRHKRRLEQLSWL 535
>AE014298-2486|AAX52502.1| 632|Drosophila melanogaster CG4805-PB,
isoform B protein.
Length = 632
Score = 30.7 bits (66), Expect = 1.3
Identities = 35/148 (23%), Positives = 60/148 (40%), Gaps = 4/148 (2%)
Frame = -1
Query: 442 NCSFCSPSSL*LWQDLNRSTLVTATTITDIRIQATSVIPDTV-PWPMDRTVAMLPLHXXX 266
+C C P L R+TL TA+ ++D R QA +P+ + P + LH
Sbjct: 435 SCENCWPGCFELTY---RATLSTASIVSDPRFQAGENLPEYIFHGPYSNASEISILHF-- 489
Query: 265 XXXXXTN*YFLKHLCY*FNKNILKNIMILLFISFEILINNFRGLLSIYKXAFVF---ECF 95
Y++ NI ++ F ++N GLL ++ +F E F
Sbjct: 490 --------YYMT--------NIFRSTTKSEMFGFTEFLSNTGGLLGLFMGFSIFSVIEIF 533
Query: 94 FFSCQLPFCECLQIRXQEVRIMNRFSYL 11
F+ P+C +R + R + + S+L
Sbjct: 534 FYITVRPYCASRTLRQRHKRRLEQLSWL 561
>AY047511-1|AAK77243.1| 476|Drosophila melanogaster GH01761p
protein.
Length = 476
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Frame = -1
Query: 481 SSVNFENCSKCSRNCSFCSPSSL*LWQDLNRSTLVTAT--TITDIRIQAT-SVIPDTVP 314
SSV +C + C+ C+P++ W D +++ + T+ DI + T + +P+ +P
Sbjct: 217 SSVYIGSCGDSTSQCNRCTPATCCRWHDPGAREVISISCLTLPDIESELTLTPVPEPLP 275
>AE014297-817|AAO41519.1| 476|Drosophila melanogaster CG33191-PA
protein.
Length = 476
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Frame = -1
Query: 481 SSVNFENCSKCSRNCSFCSPSSL*LWQDLNRSTLVTAT--TITDIRIQAT-SVIPDTVP 314
SSV +C + C+ C+P++ W D +++ + T+ DI + T + +P+ +P
Sbjct: 217 SSVYIGSCGDSTSQCNRCTPATCCRWHDPGAREVISISCLTLPDIESELTLTPVPEPLP 275
>AY226542-1|AAO47368.1| 516|Drosophila melanogaster pickpocket 11
protein.
Length = 516
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = -1
Query: 214 FNKNILKNIMILLFISFEILINNFRGLLSIY---KXAFVFECFFFSCQLPFCECL 59
++ I + +++ ++ ++ I F G+ ++ VFE FFSC P C L
Sbjct: 435 YDSAIAEELLLDVYENWLTFIGTFGGITGLFMGCSFVSVFELIFFSCVRPTCNWL 489
>AY094744-1|AAM11097.1| 790|Drosophila melanogaster GM01751p
protein.
Length = 790
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +3
Query: 384 VDLLRSCQSYNEDGEQNEQFREHFEQ 461
V LLR C+ Y EQ EQ H EQ
Sbjct: 169 VALLRKCEDYQLSNEQIEQLLLHIEQ 194
>AE014134-1695|AAF52812.2| 516|Drosophila melanogaster CG34058-PA
protein.
Length = 516
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = -1
Query: 214 FNKNILKNIMILLFISFEILINNFRGLLSIY---KXAFVFECFFFSCQLPFCECL 59
++ I + +++ ++ ++ I F G+ ++ VFE FFSC P C L
Sbjct: 435 YDSAIAEELLLDVYENWLTFIGTFGGITGLFMGCSFVSVFELIFFSCVRPTCNWL 489
>AE013599-3404|AAF46853.2| 2733|Drosophila melanogaster CG4554-PA
protein.
Length = 2733
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +3
Query: 384 VDLLRSCQSYNEDGEQNEQFREHFEQ 461
V LLR C+ Y EQ EQ H EQ
Sbjct: 2112 VALLRKCEDYQLSNEQIEQLLLHIEQ 2137
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,790,232
Number of Sequences: 53049
Number of extensions: 319941
Number of successful extensions: 877
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 877
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2074444800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -