Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_pT_N16
(517 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK128837-1|BAC87637.1| 286|Homo sapiens protein ( Homo sapiens ... 35 0.19
AL133561-1|CAB63715.1| 580|Homo sapiens hypothetical protein pr... 30 4.2
X90568-1|CAA62188.1|26926|Homo sapiens titin protein. 29 7.3
AJ277892-5|CAD12459.1| 2154|Homo sapiens Titin Novex-1 Isoform p... 29 7.3
AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein. 29 7.3
AJ277892-1|CAD12455.1|26926|Homo sapiens N2B-Titin Isoform protein. 29 7.3
AF058332-2|AAD22604.1| 926|Homo sapiens myocardium-specific tit... 29 7.3
AF058332-1|AAD22603.1| 1019|Homo sapiens titin protein. 29 7.3
BC129935-1|AAI29936.1| 1597|Homo sapiens PB1 protein protein. 29 9.7
BC129934-1|AAI29935.1| 1652|Homo sapiens PB1 protein protein. 29 9.7
BC115011-1|AAI15012.1| 1540|Homo sapiens PB1 protein protein. 29 9.7
BC115010-1|AAI15011.1| 1615|Homo sapiens PB1 protein protein. 29 9.7
BC089409-1|AAH89409.1| 425|Homo sapiens PB1 protein protein. 29 9.7
BC015323-1|AAH15323.1| 306|Homo sapiens PB1 protein protein. 29 9.7
AY281068-1|AAP34197.1| 1689|Homo sapiens polybromo-1D protein. 29 9.7
AK001507-1|BAA91728.1| 306|Homo sapiens protein ( Homo sapiens ... 29 9.7
AF225872-1|AAG48941.1| 1582|Homo sapiens polybromo-1 protein. 29 9.7
AF225870-1|AAG48939.1| 1602|Homo sapiens polybromo-1 protein. 29 9.7
AF177387-1|AAG48933.1| 1634|Homo sapiens polybromo-1 protein. 29 9.7
>AK128837-1|BAC87637.1| 286|Homo sapiens protein ( Homo sapiens
cDNA FLJ46366 fis, clone TESTI4051388. ).
Length = 286
Score = 34.7 bits (76), Expect = 0.19
Identities = 25/69 (36%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = -1
Query: 403 PTMVPASSTHLRSPPRVLLIWPPTRKPLT-LPQLTPLSNTGELIRLFFPFRAPQSE-PAR 230
P P ++ R+PPR L PPTR P T +P P + T P R P +E PAR
Sbjct: 54 PRRTPPRASPRRTPPRASLTRPPTRAPPTRMPPTAPPTRTPPTAS---PARTPPTESPAR 110
Query: 229 N*RSVSRER 203
+ S R
Sbjct: 111 TPPTASPAR 119
>AL133561-1|CAB63715.1| 580|Homo sapiens hypothetical protein
protein.
Length = 580
Score = 30.3 bits (65), Expect = 4.2
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = -1
Query: 403 PTMVPASSTHLRSPPRVLLIWPPTRKPLTLPQLTPLSNTGELIRLFFP-FRAPQSEPAR 230
PT P ++ SPPR + PP P T P+ +P + P + +P + P+R
Sbjct: 255 PTRRPPRASPTGSPPRASPMTPPRASPRTPPRASPTTTPSRASLTRTPSWASPTTTPSR 313
>X90568-1|CAA62188.1|26926|Homo sapiens titin protein.
Length = 26926
Score = 29.5 bits (63), Expect = 7.3
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 254 SEREEEAN*FTSVAEGRELGQSERLARGRPNEQHARRRPQVCR 382
S+RE A +GR+L E L G P EQ + Q+CR
Sbjct: 3996 SKREPVAIKKVQEVQGRDLLSKESLLSGIPEEQRLNLKIQICR 4038
>AJ277892-5|CAD12459.1| 2154|Homo sapiens Titin Novex-1 Isoform
protein.
Length = 2154
Score = 29.5 bits (63), Expect = 7.3
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 254 SEREEEAN*FTSVAEGRELGQSERLARGRPNEQHARRRPQVCR 382
S+RE A +GR+L E L G P EQ + Q+CR
Sbjct: 1723 SKREPVAIKKVQEVQGRDLLSKESLLSGIPEEQRLNLKIQICR 1765
>AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.
Length = 30000
Score = 29.5 bits (63), Expect = 7.3
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 254 SEREEEAN*FTSVAEGRELGQSERLARGRPNEQHARRRPQVCR 382
S+RE A +GR+L E L G P EQ + Q+CR
Sbjct: 4042 SKREPVAIKKVQEVQGRDLLSKESLLSGIPEEQRLNLKIQICR 4084
>AJ277892-1|CAD12455.1|26926|Homo sapiens N2B-Titin Isoform protein.
Length = 26926
Score = 29.5 bits (63), Expect = 7.3
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 254 SEREEEAN*FTSVAEGRELGQSERLARGRPNEQHARRRPQVCR 382
S+RE A +GR+L E L G P EQ + Q+CR
Sbjct: 3996 SKREPVAIKKVQEVQGRDLLSKESLLSGIPEEQRLNLKIQICR 4038
>AF058332-2|AAD22604.1| 926|Homo sapiens myocardium-specific titin
protein.
Length = 926
Score = 29.5 bits (63), Expect = 7.3
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 254 SEREEEAN*FTSVAEGRELGQSERLARGRPNEQHARRRPQVCR 382
S+RE A +GR+L E L G P EQ + Q+CR
Sbjct: 588 SKREPVAIKKVQEVQGRDLLSKESLLSGIPEEQRLNLKIQICR 630
>AF058332-1|AAD22603.1| 1019|Homo sapiens titin protein.
Length = 1019
Score = 29.5 bits (63), Expect = 7.3
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 254 SEREEEAN*FTSVAEGRELGQSERLARGRPNEQHARRRPQVCR 382
S+RE A +GR+L E L G P EQ + Q+CR
Sbjct: 588 SKREPVAIKKVQEVQGRDLLSKESLLSGIPEEQRLNLKIQICR 630
>BC129935-1|AAI29936.1| 1597|Homo sapiens PB1 protein protein.
Length = 1597
Score = 29.1 bits (62), Expect = 9.7
Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = -1
Query: 328 KPLTLPQL-TPLSNTGELIRLFFPFRAPQSEPARN*RSVSRERVTLKDHVEVSSFLRSLI 152
+P +LPQL TPL++ +L+ P P+S + S+ ++ + ++ SS +R++I
Sbjct: 1353 EPPSLPQLQTPLASELDLMPYTPPQSTPKSAKGSAKKEGSKRKINMSGYILFSSEMRAVI 1412
>BC129934-1|AAI29935.1| 1652|Homo sapiens PB1 protein protein.
Length = 1652
Score = 29.1 bits (62), Expect = 9.7
Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = -1
Query: 328 KPLTLPQL-TPLSNTGELIRLFFPFRAPQSEPARN*RSVSRERVTLKDHVEVSSFLRSLI 152
+P +LPQL TPL++ +L+ P P+S + S+ ++ + ++ SS +R++I
Sbjct: 1353 EPPSLPQLQTPLASELDLMPYTPPQSTPKSAKGSAKKEGSKRKINMSGYILFSSEMRAVI 1412
>BC115011-1|AAI15012.1| 1540|Homo sapiens PB1 protein protein.
Length = 1540
Score = 29.1 bits (62), Expect = 9.7
Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = -1
Query: 328 KPLTLPQL-TPLSNTGELIRLFFPFRAPQSEPARN*RSVSRERVTLKDHVEVSSFLRSLI 152
+P +LPQL TPL++ +L+ P P+S + S+ ++ + ++ SS +R++I
Sbjct: 1244 EPPSLPQLQTPLASELDLMPYTPPQSTPKSAKGSAKKEGSKRKINMSGYILFSSEMRAVI 1303
>BC115010-1|AAI15011.1| 1615|Homo sapiens PB1 protein protein.
Length = 1615
Score = 29.1 bits (62), Expect = 9.7
Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = -1
Query: 328 KPLTLPQL-TPLSNTGELIRLFFPFRAPQSEPARN*RSVSRERVTLKDHVEVSSFLRSLI 152
+P +LPQL TPL++ +L+ P P+S + S+ ++ + ++ SS +R++I
Sbjct: 1319 EPPSLPQLQTPLASELDLMPYTPPQSTPKSAKGSAKKEGSKRKINMSGYILFSSEMRAVI 1378
>BC089409-1|AAH89409.1| 425|Homo sapiens PB1 protein protein.
Length = 425
Score = 29.1 bits (62), Expect = 9.7
Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = -1
Query: 328 KPLTLPQL-TPLSNTGELIRLFFPFRAPQSEPARN*RSVSRERVTLKDHVEVSSFLRSLI 152
+P +LPQL TPL++ +L+ P P+S + S+ ++ + ++ SS +R++I
Sbjct: 129 EPPSLPQLQTPLASELDLMPYTPPQSTPKSAKGSAKKEGSKRKINMSGYILFSSEMRAVI 188
>BC015323-1|AAH15323.1| 306|Homo sapiens PB1 protein protein.
Length = 306
Score = 29.1 bits (62), Expect = 9.7
Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = -1
Query: 328 KPLTLPQL-TPLSNTGELIRLFFPFRAPQSEPARN*RSVSRERVTLKDHVEVSSFLRSLI 152
+P +LPQL TPL++ +L+ P P+S + S+ ++ + ++ SS +R++I
Sbjct: 10 EPPSLPQLQTPLASELDLMPYTPPQSTPKSAKGSAKKEGSKRKINMSGYILFSSEMRAVI 69
>AY281068-1|AAP34197.1| 1689|Homo sapiens polybromo-1D protein.
Length = 1689
Score = 29.1 bits (62), Expect = 9.7
Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = -1
Query: 328 KPLTLPQL-TPLSNTGELIRLFFPFRAPQSEPARN*RSVSRERVTLKDHVEVSSFLRSLI 152
+P +LPQL TPL++ +L+ P P+S + S+ ++ + ++ SS +R++I
Sbjct: 1338 EPPSLPQLQTPLASELDLMPYTPPQSTPKSAKGSAKKEGSKRKINMSGYILFSSEMRAVI 1397
>AK001507-1|BAA91728.1| 306|Homo sapiens protein ( Homo sapiens
cDNA FLJ10645 fis, clone NT2RP2005767, moderately
similar to G.gallus PB1 gene. ).
Length = 306
Score = 29.1 bits (62), Expect = 9.7
Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = -1
Query: 328 KPLTLPQL-TPLSNTGELIRLFFPFRAPQSEPARN*RSVSRERVTLKDHVEVSSFLRSLI 152
+P +LPQL TPL++ +L+ P P+S + S+ ++ + ++ SS +R++I
Sbjct: 10 EPPSLPQLQTPLASELDLMPYTPPQSTPKSAKGSAKKEGSKRKINMSGYILFSSEMRAVI 69
>AF225872-1|AAG48941.1| 1582|Homo sapiens polybromo-1 protein.
Length = 1582
Score = 29.1 bits (62), Expect = 9.7
Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = -1
Query: 328 KPLTLPQL-TPLSNTGELIRLFFPFRAPQSEPARN*RSVSRERVTLKDHVEVSSFLRSLI 152
+P +LPQL TPL++ +L+ P P+S + S+ ++ + ++ SS +R++I
Sbjct: 1338 EPPSLPQLQTPLASELDLMPYTPPQSTPKSAKGSAKKEGSKRKINMSGYILFSSEMRAVI 1397
>AF225870-1|AAG48939.1| 1602|Homo sapiens polybromo-1 protein.
Length = 1602
Score = 29.1 bits (62), Expect = 9.7
Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = -1
Query: 328 KPLTLPQL-TPLSNTGELIRLFFPFRAPQSEPARN*RSVSRERVTLKDHVEVSSFLRSLI 152
+P +LPQL TPL++ +L+ P P+S + S+ ++ + ++ SS +R++I
Sbjct: 1306 EPPSLPQLQTPLASELDLMPYTPPQSTPKSAKGSAKKEGSKRKINMSGYILFSSEMRAVI 1365
>AF177387-1|AAG48933.1| 1634|Homo sapiens polybromo-1 protein.
Length = 1634
Score = 29.1 bits (62), Expect = 9.7
Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = -1
Query: 328 KPLTLPQL-TPLSNTGELIRLFFPFRAPQSEPARN*RSVSRERVTLKDHVEVSSFLRSLI 152
+P +LPQL TPL++ +L+ P P+S + S+ ++ + ++ SS +R++I
Sbjct: 1338 EPPSLPQLQTPLASELDLMPYTPPQSTPKSAKGSAKKEGSKRKINMSGYILFSSEMRAVI 1397
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,984,785
Number of Sequences: 237096
Number of extensions: 1227381
Number of successful extensions: 3663
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 3525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3651
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -