Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_pT_N15
         (698 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   2.8  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    23   3.7  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    23   3.7  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   4.9  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   4.9  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   4.9  
AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    22   6.4  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   6.4  
AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    21   8.5  
AY280848-1|AAQ16312.1|  632|Apis mellifera hyperpolarization-act...    21   8.5  

>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -3

Query: 312 GLDHAKIMNRLLTARKKSKDAWSN 241
           G++H  +   ++ ARK   D W N
Sbjct: 897 GINHGPVTAGVIGARKPHYDIWGN 920


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
 Frame = -3

Query: 360 EPSQESPIPEMTHTIYGLDHAKIMNRLLTARKKSKDA--WSNLESESPVISYRIHESTPI 187
           EP  +S   E      G+    I N   +A+  SK+   +  L + S +  +  H+    
Sbjct: 282 EPFMKSQYEENNIEYEGIQD--IFNTQSSAKVMSKNGVLFFGLVNNSAIGCWNEHQPLQR 339

Query: 186 K-VDTVTQNKELAEFLLKRQILQN 118
           + +D V QN++  + ++  +I+QN
Sbjct: 340 QNMDMVAQNEKTLQMIISVKIIQN 363


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 6/28 (21%), Positives = 17/28 (60%)
 Frame = -3

Query: 573 VLRIMGQVPYIVFVKDMHEARILDLDNR 490
           + R++ + PY++ + D H+   + + N+
Sbjct: 458 ISRVLEKEPYVIILDDEHDDAFIGIVNQ 485


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -3

Query: 345 SPIPEMTHTIYGLDHAKIMNRLLTAR 268
           S +  + +TI+ LD+ +   RLL  R
Sbjct: 374 SALNPLIYTIFNLDYRRAFRRLLRIR 399


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -3

Query: 345 SPIPEMTHTIYGLDHAKIMNRLLTAR 268
           S +  + +TI+ LD+ +   RLL  R
Sbjct: 374 SALNPLIYTIFNLDYRRAFRRLLRIR 399


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -3

Query: 345 SPIPEMTHTIYGLDHAKIMNRLLTAR 268
           S +  + +TI+ LD+ +   RLL  R
Sbjct: 374 SALNPLIYTIFNLDYRRAFRRLLRIR 399


>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 87

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +2

Query: 80  QSSLVFRNCLANLFCSICLLSKN 148
           Q  + +R C  N  CSI  +++N
Sbjct: 47  QQKIQYRPCTKNQQCSILRINRN 69


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +2

Query: 80  QSSLVFRNCLANLFCSICLLSKN 148
           Q  + +R C  N  CSI  +++N
Sbjct: 96  QQKIQYRPCTKNQQCSILRINRN 118


>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = -1

Query: 662 FIGYAKVPRQMKRR 621
           ++ Y K+PR+M++R
Sbjct: 398 YMAYRKLPREMRQR 411


>AY280848-1|AAQ16312.1|  632|Apis mellifera
           hyperpolarization-activated ion channel protein.
          Length = 632

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = -1

Query: 662 FIGYAKVPRQMKRR 621
           ++ Y K+PR+M++R
Sbjct: 366 YMAYRKLPREMRQR 379


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,005
Number of Sequences: 438
Number of extensions: 3938
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)