Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_pT_N07
(814 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0934 - 32851709-32853398,32854458-32854738 93 2e-19
05_01_0084 + 562119-562411,562854-562902,563151-563162,563194-56... 89 4e-18
03_02_0151 + 5947177-5947322,5947461-5947607,5947707-5947931,594... 69 4e-12
11_08_0040 + 27891797-27891823,27891934-27892091,27892169-278924... 44 1e-04
11_06_0685 - 26272928-26273110,26273186-26273257,26273339-262734... 42 6e-04
11_06_0459 + 23830204-23830350,23830419-23830592,23830738-238308... 42 6e-04
11_06_0276 - 21826458-21826640,21826716-21826787,21826869-218269... 42 6e-04
05_06_0126 - 25834129-25834214,25834595-25834658,25836201-258365... 42 6e-04
05_01_0088 + 581619-581854,581890-582035,583143-583263,583593-58... 42 6e-04
01_06_0390 - 28938485-28938751,28939924-28941282 31 1.1
03_03_0111 + 14527548-14528543,14529158-14529337,14529428-14529805 29 3.3
03_05_0920 - 28812796-28813325,28814019-28816377 29 4.4
>02_05_0934 - 32851709-32853398,32854458-32854738
Length = 656
Score = 93.5 bits (222), Expect = 2e-19
Identities = 56/184 (30%), Positives = 87/184 (47%), Gaps = 4/184 (2%)
Frame = -3
Query: 812 GGADADIVNISXKSGNFTGGSNEWISFSEAESRQLGTGEKGDYYSLLGVLTFTFSENAVY 633
GG DA +IS + + ++ + LG G+K D+ ++ + F +E+ Y
Sbjct: 454 GGRDASTQSISRDITPGASRNEIRKTVAQIKDEGLGMGDKPDWITVKATVIFFKNESFFY 513
Query: 632 KACPQ----EQCNKKLVDQENGLFRCEKCNREYPNYKHRILLAANVSDPTGDQRVTLFNE 465
ACP QCNKK+ NG + C+KC+RE+ +R LL + D +G VT F E
Sbjct: 514 TACPNMIGDRQCNKKVTKSTNGNWTCDKCDREFEECDYRYLLQFQIQDHSGTAWVTAFQE 573
Query: 464 AAETMLGKSAEEIARLSEYDKNEYNKIFDEXXXXXXXXXXXXKMENFNDESRLKTTVVNV 285
A + +LG SA E+ L E + + K E++ DE ++K T V V
Sbjct: 574 AGQELLGCSATELNALKEREDPRFADTMLNCLFQEYLLRLKVKEESYGDERKVKNTAVKV 633
Query: 284 QPVD 273
+ VD
Sbjct: 634 EKVD 637
>05_01_0084 + 562119-562411,562854-562902,563151-563162,563194-563327,
563716-566278
Length = 1016
Score = 89.0 bits (211), Expect = 4e-18
Identities = 49/186 (26%), Positives = 95/186 (51%), Gaps = 7/186 (3%)
Frame = -3
Query: 809 GADADIVNISXKSGNFTGGSNEWISFSEAESRQLGTGEKGDYYSLLGVLTFTFSENAVYK 630
G A +++S + N G ++ + ++ + LG EK D+ ++ ++ +E+ Y
Sbjct: 617 GKTAPCISLSREMLNM-GRTDARKTIAQIKDENLGRLEKPDWITVKAAISHVTTESFCYP 675
Query: 629 ACPQ-----EQCNKKLVDQENGLFRCEKCNREYPNYKHRILLAANVSDPTGDQRVTLFNE 465
ACP+ QCNKK ++ +G++ C++C+ + N ++R +L + D TG + F+E
Sbjct: 676 ACPKLLPVGRQCNKKAINNGDGMWHCDRCDESFQNPEYRYMLRFQIQDHTGSTYASAFDE 735
Query: 464 AAETMLGKSAEEIARLSEYDKN--EYNKIFDEXXXXXXXXXXXXKMENFNDESRLKTTVV 291
A E + G+ A E+ + D++ ++ +I + K E +NDE LK T V
Sbjct: 736 AGEQIFGRKAGELFSIRNVDQDDAQFAEIIEGVRWHLYLFKLKVKEETYNDEQSLKCTAV 795
Query: 290 NVQPVD 273
V+ +D
Sbjct: 796 KVEKLD 801
>03_02_0151 +
5947177-5947322,5947461-5947607,5947707-5947931,
5948036-5948213,5948328-5948595,5948684-5948786,
5948882-5949006,5949091-5949169,5949250-5949394,
5949500-5949660,5949750-5949870,5950081-5950275
Length = 630
Score = 68.9 bits (161), Expect = 4e-12
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 2/161 (1%)
Frame = -3
Query: 698 EKGDYYSLLGVLTFTFSENAV-YKACPQEQCNKKLVDQENGLFRCEKCNREYPNYKHRIL 522
+K ++SL ++ + + Y+AC + CNKK+ + + CE C + R +
Sbjct: 471 DKPVFFSLNAYISLIKPDQTMWYRAC--KTCNKKVTEAIGSGYWCEGCQKNDAECSLRYI 528
Query: 521 LAANVSDPTGDQRVTLFNEAAETMLGKSAEEIARL-SEYDKNEYNKIFDEXXXXXXXXXX 345
+ VSDPTG+ ++LFN+ AE ++G SA+E+ R+ E + Y E
Sbjct: 529 MVIKVSDPTGEAWLSLFNDQAERIVGCSADELDRIRKEEGDDSYLLKLKEATWVPHLFRV 588
Query: 344 XXKMENFNDESRLKTTVVNVQPVDYKDGIARLLKNIKTATG 222
+ +E R + TV + PVD+ +L+ I TG
Sbjct: 589 SVTQNEYMNEKRQRITVRSEAPVDHAAEAKYMLEEIAKLTG 629
>11_08_0040 +
27891797-27891823,27891934-27892091,27892169-27892463,
27892548-27892607,27892686-27893036
Length = 296
Score = 44.0 bits (99), Expect = 1e-04
Identities = 25/87 (28%), Positives = 40/87 (45%)
Frame = -3
Query: 635 YKACPQEQCNKKLVDQENGLFRCEKCNREYPNYKHRILLAANVSDPTGDQRVTLFNEAAE 456
Y +C CNK +V Q+N + C CN+ N R L +SD T T+F++ A+
Sbjct: 30 YMSC--NLCNK-IVIQKNDKYHCRNCNKYPENTTPRYRLRLQISDHTTSTSCTIFDDVAQ 86
Query: 455 TMLGKSAEEIARLSEYDKNEYNKIFDE 375
+ML + L + +E I +
Sbjct: 87 SMLETPVSSLLNLLDGKNDEIPNIIQQ 113
>11_06_0685 -
26272928-26273110,26273186-26273257,26273339-26273425,
26273566-26273655,26273741-26273785,26273872-26274054,
26274333-26274392,26274521-26274703,26274779-26274907,
26275083-26275380,26275454-26275608,26275791-26275929,
26276015-26276096,26276167-26276285,26276367-26276494,
26276640-26276813,26276882-26277028
Length = 757
Score = 41.9 bits (94), Expect = 6e-04
Identities = 22/69 (31%), Positives = 35/69 (50%)
Frame = -3
Query: 650 SENAVYKACPQEQCNKKLVDQENGLFRCEKCNREYPNYKHRILLAANVSDPTGDQRVTLF 471
S N Y +C + C + +E+ ++ C C +E N K R ++ +SD T T+F
Sbjct: 278 SRNWWYMSCDKCFCGTR---KESNVYICNSCGKEAVNPKPRYVINLEISDHTTRTTCTIF 334
Query: 470 NEAAETMLG 444
NE AE + G
Sbjct: 335 NEEAERIFG 343
>11_06_0459 +
23830204-23830350,23830419-23830592,23830738-23830865,
23830947-23831065,23831136-23831217,23831303-23831441,
23831624-23831778,23831852-23832149,23832325-23832453,
23832529-23832711,23832840-23832899,23832973-23833101,
23833177-23833359,23833446-23833490,23833576-23833665,
23833806-23833892,23833974-23834045,23834120-23834302
Length = 800
Score = 41.9 bits (94), Expect = 6e-04
Identities = 22/69 (31%), Positives = 35/69 (50%)
Frame = -3
Query: 650 SENAVYKACPQEQCNKKLVDQENGLFRCEKCNREYPNYKHRILLAANVSDPTGDQRVTLF 471
S N Y +C + C + +E+ ++ C C +E N K R ++ +SD T T+F
Sbjct: 278 SRNWWYMSCDKCFCGTR---KESNVYICNSCGKEAVNPKPRYVINLEISDHTTRTTCTIF 334
Query: 470 NEAAETMLG 444
NE AE + G
Sbjct: 335 NEEAERIFG 343
>11_06_0276 -
21826458-21826640,21826716-21826787,21826869-21826955,
21827096-21827185,21827271-21827315,21827402-21827584,
21827660-21827788,21827862-21827921,21828050-21828232,
21828308-21828436,21828612-21828909,21828983-21829137,
21829320-21829458,21829544-21829625,21829696-21829814,
21829896-21830023,21830169-21830342,21830411-21830557
Length = 800
Score = 41.9 bits (94), Expect = 6e-04
Identities = 22/69 (31%), Positives = 35/69 (50%)
Frame = -3
Query: 650 SENAVYKACPQEQCNKKLVDQENGLFRCEKCNREYPNYKHRILLAANVSDPTGDQRVTLF 471
S N Y +C + C + +E+ ++ C C +E N K R ++ +SD T T+F
Sbjct: 278 SRNWWYMSCDKCFCGTR---KESNVYICNSCGKEAVNPKPRYVINLEISDHTTRTTCTIF 334
Query: 470 NEAAETMLG 444
NE AE + G
Sbjct: 335 NEEAERIFG 343
>05_06_0126 -
25834129-25834214,25834595-25834658,25836201-25836521,
25836912-25837040,25837118-25837177,25837251-25837548,
25837622-25837776,25837959-25838097,25838185-25838266,
25838337-25838455,25838537-25838664,25838810-25838983,
25839052-25839203,25839393-25839425,25840362-25841331,
25841412-25841537
Length = 1011
Score = 41.9 bits (94), Expect = 6e-04
Identities = 22/69 (31%), Positives = 35/69 (50%)
Frame = -3
Query: 650 SENAVYKACPQEQCNKKLVDQENGLFRCEKCNREYPNYKHRILLAANVSDPTGDQRVTLF 471
S N Y +C + C + +E+ ++ C C +E N K R ++ +SD T T+F
Sbjct: 656 SRNWWYMSCDKCFCGTR---KESNVYICNSCGKEAVNPKPRYVINLEISDHTTRTTCTIF 712
Query: 470 NEAAETMLG 444
NE AE + G
Sbjct: 713 NEEAERIFG 721
>05_01_0088 +
581619-581854,581890-582035,583143-583263,583593-583773,
583842-584015,584161-584288,584370-584488,584559-584640,
584726-584864,585047-585201,585275-585572,585748-585876,
585952-586134,586263-586322,586396-586524,586600-586782,
586869-586913,586999-587088,587229-587315,587397-587468,
587813-587887
Length = 943
Score = 41.9 bits (94), Expect = 6e-04
Identities = 22/69 (31%), Positives = 35/69 (50%)
Frame = -3
Query: 650 SENAVYKACPQEQCNKKLVDQENGLFRCEKCNREYPNYKHRILLAANVSDPTGDQRVTLF 471
S N Y +C + C + +E+ ++ C C +E N K R ++ +SD T T+F
Sbjct: 457 SRNWWYMSCDKCFCGTR---KESNVYICNSCGKEAVNPKPRYVINLEISDHTTRTTCTIF 513
Query: 470 NEAAETMLG 444
NE AE + G
Sbjct: 514 NEEAERIFG 522
>01_06_0390 - 28938485-28938751,28939924-28941282
Length = 541
Score = 31.1 bits (67), Expect = 1.1
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Frame = +1
Query: 358 KVLNFTSSKI-LLYSFLSYSDRRAISSADLPSIVSAA-SLKSVTRWSPVGSETFAANKIL 531
+V+NF S++I LL F+ S + S +LP IVS + +L+ P+G FAA
Sbjct: 423 RVINFESAQICLLLPFILQSRAHRLHSVELPRIVSCSPTLEDCIVKCPIG---FAAT--A 477
Query: 532 CL*LGYSLLHFSHRNRPFS*STSFLLHCSCG 624
L LG +SH + S ++H S G
Sbjct: 478 GLPLGSPQPDYSHTCDTYVSYPSCVVHASMG 508
>03_03_0111 + 14527548-14528543,14529158-14529337,14529428-14529805
Length = 517
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +2
Query: 584 FLDRQVSCCTVLADMPCTRHFRKT*TSIRRGDCSNRLS 697
F +V+ + DMPC R F +S+RR +C++ ++
Sbjct: 271 FFYTRVASIVQVEDMPCVRIFETEMSSLRRPECNDHVN 308
>03_05_0920 - 28812796-28813325,28814019-28816377
Length = 962
Score = 29.1 bits (62), Expect = 4.4
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Frame = -3
Query: 809 GADADIVNISXKSGNFTGGSNEWISFSEAES--RQLGTGEKGDYYSLLGVL---TFTFSE 645
G+D D+V I+ GN GG+ ++S+A S R + E G+ + VL T FS+
Sbjct: 550 GSDPDMVKITVAGGNVNGGAAASETYSQASSGPRDIHVVETGNMVISIQVLRNVTNNFSD 609
Query: 644 NAV 636
V
Sbjct: 610 ENV 612
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,652,636
Number of Sequences: 37544
Number of extensions: 384428
Number of successful extensions: 1013
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1012
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2221181676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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