Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_pT_N07
         (814 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M63488-1|AAA36584.1|  616|Homo sapiens replication protein A, 70...   171   2e-42
BC018126-1|AAH18126.1|  616|Homo sapiens replication protein A1,...   171   2e-42
AY599563-1|AAS94324.1|  616|Homo sapiens replication protein A1,...   171   2e-42
AB209732-1|BAD92969.1|  630|Homo sapiens replication protein A1,...   171   2e-42
BC112137-1|AAI12138.1|  200|Homo sapiens ZNF251 protein protein.       31   6.5  
BC006258-1|AAH06258.2|  293|Homo sapiens ZNF251 protein protein.       31   6.5  

>M63488-1|AAA36584.1|  616|Homo sapiens replication protein A,
           70-kDa subunit protein.
          Length = 616

 Score =  171 bits (417), Expect = 2e-42
 Identities = 77/193 (39%), Positives = 125/193 (64%), Gaps = 1/193 (0%)
 Frame = -3

Query: 809 GADADIVNISX-KSGNFTGGSNEWISFSEAESRQLGTGEKGDYYSLLGVLTFTFSENAVY 633
           G   D V+IS  KSG   G +  W +  E +S  LG G+K DY+S +  + +   EN +Y
Sbjct: 419 GQALDGVSISDLKSGGVGGSNTNWKTLYEVKSENLGQGDKPDYFSSVATVVYLRKENCMY 478

Query: 632 KACPQEQCNKKLVDQENGLFRCEKCNREYPNYKHRILLAANVSDPTGDQRVTLFNEAAET 453
           +ACP + CNKK++DQ+NGL+RCEKC+ E+PN+K+R++L+ N++D   +Q VT F E+AE 
Sbjct: 479 QACPTQDCNKKVIDQQNGLYRCEKCDTEFPNFKYRMILSVNIADFQENQWVTCFQESAEA 538

Query: 452 MLGKSAEEIARLSEYDKNEYNKIFDEXXXXXXXXXXXXKMENFNDESRLKTTVVNVQPVD 273
           +LG++A  +  L + ++  + ++F              K+E +NDESR+K TV++V+PVD
Sbjct: 539 ILGQNAAYLGELKDKNEQAFEEVFQNANFRSFIFRVRVKVETYNDESRIKATVMDVKPVD 598

Query: 272 YKDGIARLLKNIK 234
           Y++   RL+ +I+
Sbjct: 599 YREYGRRLVMSIR 611


>BC018126-1|AAH18126.1|  616|Homo sapiens replication protein A1,
           70kDa protein.
          Length = 616

 Score =  171 bits (417), Expect = 2e-42
 Identities = 77/193 (39%), Positives = 125/193 (64%), Gaps = 1/193 (0%)
 Frame = -3

Query: 809 GADADIVNISX-KSGNFTGGSNEWISFSEAESRQLGTGEKGDYYSLLGVLTFTFSENAVY 633
           G   D V+IS  KSG   G +  W +  E +S  LG G+K DY+S +  + +   EN +Y
Sbjct: 419 GQALDGVSISDLKSGGVGGSNTNWKTLYEVKSENLGQGDKPDYFSSVATVVYLRKENCMY 478

Query: 632 KACPQEQCNKKLVDQENGLFRCEKCNREYPNYKHRILLAANVSDPTGDQRVTLFNEAAET 453
           +ACP + CNKK++DQ+NGL+RCEKC+ E+PN+K+R++L+ N++D   +Q VT F E+AE 
Sbjct: 479 QACPTQDCNKKVIDQQNGLYRCEKCDTEFPNFKYRMILSVNIADFQENQWVTCFQESAEA 538

Query: 452 MLGKSAEEIARLSEYDKNEYNKIFDEXXXXXXXXXXXXKMENFNDESRLKTTVVNVQPVD 273
           +LG++A  +  L + ++  + ++F              K+E +NDESR+K TV++V+PVD
Sbjct: 539 ILGQNAAYLGELKDKNEQAFEEVFQNANFRSFIFRVRVKVETYNDESRIKATVMDVKPVD 598

Query: 272 YKDGIARLLKNIK 234
           Y++   RL+ +I+
Sbjct: 599 YREYGRRLVMSIR 611


>AY599563-1|AAS94324.1|  616|Homo sapiens replication protein A1,
           70kDa protein.
          Length = 616

 Score =  171 bits (417), Expect = 2e-42
 Identities = 77/193 (39%), Positives = 125/193 (64%), Gaps = 1/193 (0%)
 Frame = -3

Query: 809 GADADIVNISX-KSGNFTGGSNEWISFSEAESRQLGTGEKGDYYSLLGVLTFTFSENAVY 633
           G   D V+IS  KSG   G +  W +  E +S  LG G+K DY+S +  + +   EN +Y
Sbjct: 419 GQALDGVSISDLKSGGVGGSNTNWKTLYEVKSENLGQGDKPDYFSSVATVVYLRKENCMY 478

Query: 632 KACPQEQCNKKLVDQENGLFRCEKCNREYPNYKHRILLAANVSDPTGDQRVTLFNEAAET 453
           +ACP + CNKK++DQ+NGL+RCEKC+ E+PN+K+R++L+ N++D   +Q VT F E+AE 
Sbjct: 479 QACPTQDCNKKVIDQQNGLYRCEKCDTEFPNFKYRMILSVNIADFQENQWVTCFQESAEA 538

Query: 452 MLGKSAEEIARLSEYDKNEYNKIFDEXXXXXXXXXXXXKMENFNDESRLKTTVVNVQPVD 273
           +LG++A  +  L + ++  + ++F              K+E +NDESR+K TV++V+PVD
Sbjct: 539 ILGQNAAYLGELKDKNEQAFEEVFQNANFRSFIFRVRVKVETYNDESRIKATVMDVKPVD 598

Query: 272 YKDGIARLLKNIK 234
           Y++   RL+ +I+
Sbjct: 599 YREYGRRLVMSIR 611


>AB209732-1|BAD92969.1|  630|Homo sapiens replication protein A1,
            70kDa variant protein.
          Length = 630

 Score =  171 bits (417), Expect = 2e-42
 Identities = 77/193 (39%), Positives = 125/193 (64%), Gaps = 1/193 (0%)
 Frame = -3

Query: 809  GADADIVNISX-KSGNFTGGSNEWISFSEAESRQLGTGEKGDYYSLLGVLTFTFSENAVY 633
            G   D V+IS  KSG   G +  W +  E +S  LG G+K DY+S +  + +   EN +Y
Sbjct: 433  GQALDGVSISDLKSGGVGGSNTNWKTLYEVKSENLGQGDKPDYFSSVATVVYLRKENCMY 492

Query: 632  KACPQEQCNKKLVDQENGLFRCEKCNREYPNYKHRILLAANVSDPTGDQRVTLFNEAAET 453
            +ACP + CNKK++DQ+NGL+RCEKC+ E+PN+K+R++L+ N++D   +Q VT F E+AE 
Sbjct: 493  QACPTQDCNKKVIDQQNGLYRCEKCDTEFPNFKYRMILSVNIADFQENQWVTCFQESAEA 552

Query: 452  MLGKSAEEIARLSEYDKNEYNKIFDEXXXXXXXXXXXXKMENFNDESRLKTTVVNVQPVD 273
            +LG++A  +  L + ++  + ++F              K+E +NDESR+K TV++V+PVD
Sbjct: 553  ILGQNAAYLGELKDKNEQAFEEVFQNANFRSFIFRVRVKVETYNDESRIKATVMDVKPVD 612

Query: 272  YKDGIARLLKNIK 234
            Y++   RL+ +I+
Sbjct: 613  YREYGRRLVMSIR 625


>BC112137-1|AAI12138.1|  200|Homo sapiens ZNF251 protein protein.
          Length = 200

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 18/61 (29%), Positives = 27/61 (44%)
 Frame = -3

Query: 563 KCNREYPNYKHRILLAANVSDPTGDQRVTLFNEAAETMLGKSAEEIARLSEYDKNEYNKI 384
           KC +  P + H   L A+   PTG++    FN  A  +L  +     +   +  NEY K 
Sbjct: 109 KCRKHGPAFVHGSSLTADGQIPTGEKHGRAFNHGANLILRWTVHTGEK--SFGCNEYGKA 166

Query: 383 F 381
           F
Sbjct: 167 F 167


>BC006258-1|AAH06258.2|  293|Homo sapiens ZNF251 protein protein.
          Length = 293

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 18/61 (29%), Positives = 27/61 (44%)
 Frame = -3

Query: 563 KCNREYPNYKHRILLAANVSDPTGDQRVTLFNEAAETMLGKSAEEIARLSEYDKNEYNKI 384
           KC +  P + H   L A+   PTG++    FN  A  +L  +     +   +  NEY K 
Sbjct: 139 KCRKHGPAFVHGSSLTADGQIPTGEKHGRAFNHGANLILRWTVHTGEK--SFGCNEYGKA 196

Query: 383 F 381
           F
Sbjct: 197 F 197


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,121,119
Number of Sequences: 237096
Number of extensions: 2120241
Number of successful extensions: 4974
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4974
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10092110758
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)