Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_pT_N07
(814 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41535-4|AAB63407.1| 655|Caenorhabditis elegans Hypothetical pr... 111 6e-25
AF016442-9|AAB65921.1| 714|Caenorhabditis elegans Hypothetical ... 32 0.56
Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical pr... 29 5.2
U80454-3|AAB37874.1| 216|Caenorhabditis elegans Hypothetical pr... 29 5.2
U80453-3|AAV58885.1| 434|Caenorhabditis elegans Serine palmitoy... 28 6.9
U80453-2|AAK31446.1| 458|Caenorhabditis elegans Serine palmitoy... 28 6.9
U40414-2|AAA81405.2| 634|Caenorhabditis elegans Hypothetical pr... 28 6.9
AC006629-10|ABC48257.1| 312|Caenorhabditis elegans Hypothetical... 28 6.9
U50135-5|AAN63430.2| 346|Caenorhabditis elegans Hypothetical pr... 28 9.1
U13071-4|AAA20671.1| 510|Caenorhabditis elegans Hypothetical pr... 28 9.1
>U41535-4|AAB63407.1| 655|Caenorhabditis elegans Hypothetical
protein F18A1.5 protein.
Length = 655
Score = 111 bits (267), Expect = 6e-25
Identities = 64/177 (36%), Positives = 95/177 (53%), Gaps = 2/177 (1%)
Frame = -3
Query: 758 GGSNEWI-SFSEAESRQLGT-GEKGDYYSLLGVLTFTFSENAVYKACPQEQCNKKLVDQE 585
GGSNE + + + Q G +KGDY ++ ++T NA+Y+ C E C KKLV E
Sbjct: 472 GGSNEAPRTIAGLQEMQFGKDSDKGDYATVKAMITRVNPTNALYRGCASEGCQKKLVG-E 530
Query: 584 NGLFRCEKCNREYPNYKHRILLAANVSDPTGDQRVTLFNEAAETMLGKSAEEIARLSEYD 405
NG +RCEKCN+ +K ++ +SD TG VT F ++A ++GKSA E+ L +
Sbjct: 531 NGDYRCEKCNKNMNKFKWLYMMQFELSDETGQVYVTAFGDSAAKIVGKSAAELGELHDES 590
Query: 404 KNEYNKIFDEXXXXXXXXXXXXKMENFNDESRLKTTVVNVQPVDYKDGIARLLKNIK 234
+EYN IF+ KM+++N+E R K TV V V+ I L + I+
Sbjct: 591 PDEYNAIFERLQFVPKMWRLRCKMDSYNEEVRQKMTVYGVDDVNQDKYIENLKQMIE 647
>AF016442-9|AAB65921.1| 714|Caenorhabditis elegans Hypothetical
protein K12B6.8 protein.
Length = 714
Score = 31.9 bits (69), Expect = 0.56
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -3
Query: 611 CNKKLVDQENGLFRCEKCNREYPNYKHRILLAANVSDPTGDQRVTLFNE 465
C+ +++ + +CE+C + LL +V PT QR+ LF+E
Sbjct: 658 CHDEIMTNDKSAIKCERCTKSIHEKCAAPLLQQSVMCPTCKQRMLLFSE 706
>Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical
protein T21E8.2 protein.
Length = 1263
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 222 SSGRFYVLEKSGNTVLIVDGLYVNY-GRLQPGFIIKIFH 335
S G Y S NTV++ G + Y G L+P +++IFH
Sbjct: 286 SRGFTYFFCNSLNTVILYVGANMIYSGSLEPAVVVRIFH 324
>U80454-3|AAB37874.1| 216|Caenorhabditis elegans Hypothetical
protein T16A1.3 protein.
Length = 216
Score = 28.7 bits (61), Expect = 5.2
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 315 FIIKIFHLGTEFKDKSFEFHFVKDFVIFVLVVF 413
F++ FH+GT K E F+ F + + V+F
Sbjct: 14 FLLVFFHVGTFAKSSQIENKFIPTFAVTLKVIF 46
>U80453-3|AAV58885.1| 434|Caenorhabditis elegans Serine palmitoyl
transferase familyprotein 1, isoform b protein.
Length = 434
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +3
Query: 249 KSGNTVLIVDGLYVNYGRLQPGFIIKIFHLGTEFKDKSF 365
KS ++V+GLYVNY L P + KI FK + F
Sbjct: 200 KSVRRFIVVEGLYVNYADLCP--LPKIIEFKWRFKVRVF 236
>U80453-2|AAK31446.1| 458|Caenorhabditis elegans Serine palmitoyl
transferase familyprotein 1, isoform a protein.
Length = 458
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +3
Query: 249 KSGNTVLIVDGLYVNYGRLQPGFIIKIFHLGTEFKDKSF 365
KS ++V+GLYVNY L P + KI FK + F
Sbjct: 224 KSVRRFIVVEGLYVNYADLCP--LPKIIEFKWRFKVRVF 260
>U40414-2|AAA81405.2| 634|Caenorhabditis elegans Hypothetical
protein F53B3.2 protein.
Length = 634
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/68 (26%), Positives = 21/68 (30%)
Frame = -1
Query: 649 PKMPCTRHVRKNSATRNLSIKKMAYSDARNVIENILITNTGSYWRQTSQILLATNVSRFS 470
P +P T + T S T T Q IL AT +
Sbjct: 207 PNIPMTTSTTPTTTTSTFPTSTTEKSTTAQPSTTTKPTTTSPPTTQVKTILPATEAQKIF 266
Query: 469 TKPQKQCW 446
TKPQ Q W
Sbjct: 267 TKPQYQIW 274
>AC006629-10|ABC48257.1| 312|Caenorhabditis elegans Hypothetical
protein F12E12.8 protein.
Length = 312
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/47 (29%), Positives = 28/47 (59%)
Frame = +1
Query: 331 SILVRNLKTKVLNFTSSKILLYSFLSYSDRRAISSADLPSIVSAASL 471
S+ R L+T + +FT ++ YSF+S ++ + S +LP + A ++
Sbjct: 10 SLPTRPLETVLQSFTYFDMIKYSFISKVTKKVVRSFNLPLTLLAINV 56
>U50135-5|AAN63430.2| 346|Caenorhabditis elegans Hypothetical
protein C52E12.6 protein.
Length = 346
Score = 27.9 bits (59), Expect = 9.1
Identities = 27/125 (21%), Positives = 56/125 (44%), Gaps = 1/125 (0%)
Frame = -3
Query: 746 EWISFSEAESRQLGTGEKGDYYSLLGVLTFTFSENAVYKACPQEQCNKKLVDQENGLFRC 567
E +S ES + D + LG+ F S++ + +E +K + ++C
Sbjct: 55 EELSLERGESSNV---HPSDAHGYLGMCDFEDSDDTMMPVPKREMTRQKFRRFRHKEYQC 111
Query: 566 EKCNREYPNYKHRILLAANVSDPTGDQRVTLFNEAAE-TMLGKSAEEIARLSEYDKNEYN 390
++C+R + KH L V G + + +++ + GK ++ L+E+ NE+N
Sbjct: 112 DECDRMF-TLKHN-LQNHFVQYHMGCKTLHKACVSSKCDICGKIYSAVSVLAEHMLNEHN 169
Query: 389 KIFDE 375
+ D+
Sbjct: 170 RYLDQ 174
>U13071-4|AAA20671.1| 510|Caenorhabditis elegans Hypothetical
protein T22F7.1 protein.
Length = 510
Score = 27.9 bits (59), Expect = 9.1
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Frame = -3
Query: 617 EQCNKKLVDQ---ENGLFRCEKCNREYPNYKHRILLAANVSDPTGDQRVTLFNEAAETML 447
E+ N+K V + N L C+K N + + A S PT R+T+F E +
Sbjct: 273 EKKNRKAVQKWIKRNELLSCKKLNYDLDMIMEKTEKIATSSSPTPQNRLTIFEMIREIL- 331
Query: 446 GKSAEEIAR 420
S EI R
Sbjct: 332 --SDREITR 338
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,409,758
Number of Sequences: 27780
Number of extensions: 355348
Number of successful extensions: 1032
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1031
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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