Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_pT_N03
         (329 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069748-1|AAL39893.1|  772|Drosophila melanogaster LP08717p pro...    31   0.46 
AE014296-2|AAF47324.1|  772|Drosophila melanogaster CG6821-PA pr...    31   0.46 
AY070581-1|AAL48052.1|  422|Drosophila melanogaster RE66124p pro...    27   7.5  
AE014297-3765|AAN14044.1|  422|Drosophila melanogaster CG31300-P...    27   7.5  

>AY069748-1|AAL39893.1|  772|Drosophila melanogaster LP08717p
           protein.
          Length = 772

 Score = 30.7 bits (66), Expect = 0.46
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +3

Query: 177 EMSWYVPSNLFKFLYIIYVITY*KYFDTTY 266
           E  ++VP+  FK + + YV T+ KYF+  Y
Sbjct: 731 ESDFFVPNGFFKDVKVYYVDTFAKYFEKKY 760


>AE014296-2|AAF47324.1|  772|Drosophila melanogaster CG6821-PA
           protein.
          Length = 772

 Score = 30.7 bits (66), Expect = 0.46
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +3

Query: 177 EMSWYVPSNLFKFLYIIYVITY*KYFDTTY 266
           E  ++VP+  FK + + YV T+ KYF+  Y
Sbjct: 731 ESDFFVPNGFFKDVKVYYVDTFAKYFEKKY 760


>AY070581-1|AAL48052.1|  422|Drosophila melanogaster RE66124p
           protein.
          Length = 422

 Score = 26.6 bits (56), Expect = 7.5
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = -3

Query: 216 KT*KG*KAHTRTFLNKFQLSQSCPVFI 136
           K  KG  AH  T L  FQ+S  CP+ I
Sbjct: 276 KNNKGTGAHEDTMLVDFQISNLCPITI 302


>AE014297-3765|AAN14044.1|  422|Drosophila melanogaster CG31300-PA
           protein.
          Length = 422

 Score = 26.6 bits (56), Expect = 7.5
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = -3

Query: 216 KT*KG*KAHTRTFLNKFQLSQSCPVFI 136
           K  KG  AH  T L  FQ+S  CP+ I
Sbjct: 276 KNNKGTGAHEDTMLVDFQISNLCPITI 302


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,746,189
Number of Sequences: 53049
Number of extensions: 212087
Number of successful extensions: 340
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 340
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 714329562
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)