Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_pT_M24
(662 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1703.01c ||SPBP4H10.22c|RNase P and RNase MRP subunit|Schizo... 65 1e-11
SPCC550.13 |dfp1|rad35, him1|Hsk1-Dfp1 kinase complex regulatory... 29 0.79
SPAC23C11.05 |||inorganic pyrophosphatase |Schizosaccharomyces p... 27 1.8
SPCC1827.08c |pof7|SPCC70.11c|F-box protein Pof7|Schizosaccharom... 27 2.4
SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic... 25 7.4
SPCC1393.07c |mug4||sequence orphan|Schizosaccharomyces pombe|ch... 25 7.4
SPCC965.13 |||membrane transporter|Schizosaccharomyces pombe|chr... 25 7.4
SPAP27G11.07c |||serine/threonine protein kinase |Schizosaccharo... 25 7.4
SPCC663.02 |wtf14||wtf element Wtf14|Schizosaccharomyces pombe|c... 25 9.7
SPCC1840.02c |bgs4|orb11, cwg1|1,3-beta-glucan synthase subunit ... 25 9.7
>SPBC1703.01c ||SPBP4H10.22c|RNase P and RNase MRP
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 217
Score = 64.9 bits (151), Expect = 1e-11
Identities = 39/134 (29%), Positives = 68/134 (50%), Gaps = 4/134 (2%)
Frame = -1
Query: 623 YEDVVQMNKIWLEYITEVLAMDDGVPEPNSKNWETLTLSLYKADYHGCMLTVVRSKCPSF 444
Y ++ +W YI EV+A G E+L L KA+Y G + V+RSK +
Sbjct: 93 YSQFKHLHSMWCSYILEVIAGCTG---------ESLMAKLAKAEYQGAYMQVLRSKSTTR 143
Query: 443 INKTGICIMDTKNTFKIVSKDNIVTTIPKKECVFELYL----KKFKVTLFGKLLCAKPAE 276
+ GICI ++K+ +++K+N V +PK++ V ++ + +K L+ + L + +
Sbjct: 144 VGLEGICIHESKHMLSLITKENRVVRVPKQDSVMKVIVDVPQRKLVFELYTQHLLLRAGD 203
Query: 275 RSTKKIKGHLHPDL 234
RS K+ K DL
Sbjct: 204 RSNKRFKSKNTIDL 217
>SPCC550.13 |dfp1|rad35, him1|Hsk1-Dfp1 kinase complex regulatory
subunit Dfp1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 545
Score = 28.7 bits (61), Expect = 0.79
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -1
Query: 416 DTKNTFKIVSKDNIVTTIPKKECV 345
+ K F++V+ +NI+TT PK + V
Sbjct: 55 EVKTDFEVVNNENIITTTPKHQTV 78
>SPAC23C11.05 |||inorganic pyrophosphatase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 289
Score = 27.5 bits (58), Expect = 1.8
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2
Query: 461 NGLPLTCIHDSPLYTNLRLTFPN 529
NG P++ HD PLY N T N
Sbjct: 24 NGTPISSWHDIPLYANAEKTILN 46
>SPCC1827.08c |pof7|SPCC70.11c|F-box protein
Pof7|Schizosaccharomyces pombe|chr 3|||Manual
Length = 361
Score = 27.1 bits (57), Expect = 2.4
Identities = 10/42 (23%), Positives = 25/42 (59%)
Frame = -1
Query: 587 EYITEVLAMDDGVPEPNSKNWETLTLSLYKADYHGCMLTVVR 462
E+ + ++++ + E ++W+TL L ++ + GC ++V R
Sbjct: 169 EWQQSIKSIEEELVEKYQQSWKTLFLKKPRSRFDGCYISVCR 210
>SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic
subunit Bgs1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1729
Score = 25.4 bits (53), Expect = 7.4
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +2
Query: 14 YLHPYFHLNNMLKLF*NYAIYLIRMLLTNFKELIT 118
Y H FH+NNM+ +F ++ L+ +++ N + T
Sbjct: 1170 YAHAGFHVNNMVIMF---SLQLLMLVIINLGAMYT 1201
>SPCC1393.07c |mug4||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 845
Score = 25.4 bits (53), Expect = 7.4
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 364 IVVTILSLETILKVFFVSIMHIPVL 438
+V+T L T+ KV V +HIPVL
Sbjct: 186 LVLTFLDTTTVSKVNIVLEIHIPVL 210
>SPCC965.13 |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 537
Score = 25.4 bits (53), Expect = 7.4
Identities = 8/33 (24%), Positives = 18/33 (54%)
Frame = -3
Query: 357 KRMCIRIVFEKIQSYIIWEAAVCKTS*TLYKEN 259
K++ + V+ ++ Y+IW + C +Y+ N
Sbjct: 87 KKLFVATVYTFLEVYVIWSSTACINFFDIYQTN 119
>SPAP27G11.07c |||serine/threonine protein kinase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 238
Score = 25.4 bits (53), Expect = 7.4
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +1
Query: 232 HKSGCKCPLIFFVERSAG 285
H G KCP+++F++ + G
Sbjct: 80 HYVGIKCPMLYFIDANRG 97
>SPCC663.02 |wtf14||wtf element Wtf14|Schizosaccharomyces pombe|chr
3|||Manual
Length = 222
Score = 25.0 bits (52), Expect = 9.7
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +1
Query: 385 LETILKVFFVSIMHIPVLLIKLGHLERTTVNMHP**SALYKLKVNVSQFLL 537
L ILK+ FV+ IP+L+ H E+ + P + + +NV+ F++
Sbjct: 151 LYAILKLTFVNAFAIPLLMFFRSHFEQWRLGC-PLVERVIGVMLNVAYFII 200
>SPCC1840.02c |bgs4|orb11, cwg1|1,3-beta-glucan synthase subunit
Bgs4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1955
Score = 25.0 bits (52), Expect = 9.7
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 14 YLHPYFHLNNMLKLF*NYAIYLIRMLLTNFKELITKMCIFY 136
+ HP FHLNNM F ++ L ++L N + + + Y
Sbjct: 1352 FAHPGFHLNNM---FIMLSVQLFMVVLINLGAIYHVVTVCY 1389
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,718,308
Number of Sequences: 5004
Number of extensions: 58834
Number of successful extensions: 151
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 151
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 301829700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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