Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_pT_M24
(662 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81034-5|CAB02730.1| 198|Caenorhabditis elegans Hypothetical pr... 71 1e-12
U40028-3|AAW57826.1| 378|Caenorhabditis elegans Fucosyl transfe... 33 0.14
AJ745073-1|CAG32979.1| 378|Caenorhabditis elegans alpha1,3-fuco... 33 0.14
Z66498-5|CAA91294.2| 513|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z54327-14|CAA91124.2| 513|Caenorhabditis elegans Hypothetical p... 29 2.2
U13070-10|AAC46644.3| 294|Caenorhabditis elegans Hypothetical p... 28 6.8
U13070-9|AAU05578.1| 388|Caenorhabditis elegans Hypothetical pr... 28 6.8
U13070-8|AAN84828.1| 433|Caenorhabditis elegans Hypothetical pr... 28 6.8
AB079783-1|BAB84821.1| 433|Caenorhabditis elegans endo-beta-N-a... 28 6.8
Z79755-9|CAC42297.1| 143|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z79600-5|CAB01878.2| 412|Caenorhabditis elegans Hypothetical pr... 27 9.0
AF520567-1|AAM75345.1| 412|Caenorhabditis elegans intraflagella... 27 9.0
>Z81034-5|CAB02730.1| 198|Caenorhabditis elegans Hypothetical
protein C15C6.4 protein.
Length = 198
Score = 70.5 bits (165), Expect = 1e-12
Identities = 39/125 (31%), Positives = 69/125 (55%)
Frame = -1
Query: 638 RHSVKYEDVVQMNKIWLEYITEVLAMDDGVPEPNSKNWETLTLSLYKADYHGCMLTVVRS 459
+ + K+ D+V MN W +Y E L N + + ++ K+DYHG +LT+ +
Sbjct: 57 KKAFKFADIVPMNTDWQKYFRERLG--------NHFSSTKIEKTILKSDYHGALLTIWLA 108
Query: 458 KCPSFINKTGICIMDTKNTFKIVSKDNIVTTIPKKECVFELYLKKFKVTLFGKLLCAKPA 279
+ P+ I +GI +++T++TF++V++++ IPKK VF L +LFG + +PA
Sbjct: 109 ENPTQIGISGIVVLETRHTFQMVTQEDRFVVIPKKGSVFRFILGDRLFSLFGDGMRTRPA 168
Query: 278 ERSTK 264
R K
Sbjct: 169 WRGKK 173
>U40028-3|AAW57826.1| 378|Caenorhabditis elegans Fucosyl
transferase protein 5 protein.
Length = 378
Score = 33.5 bits (73), Expect = 0.14
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = -1
Query: 467 VRSKCPSFINKTGICIMDTKNTFKIVSKDNIVTTIPKKECVFELYLKKFKVTLFGKLLCA 288
V+S P+ +N + I TK T +VS N +KE V +L K + L+G+L
Sbjct: 162 VKSYVPAEVNYSEIWNSKTKETLWMVSNGNAQNK--RKELVEKLIKKGMSIDLYGQLYKK 219
Query: 287 KPAE 276
+PAE
Sbjct: 220 EPAE 223
>AJ745073-1|CAG32979.1| 378|Caenorhabditis elegans
alpha1,3-fucosyltransferase homologueprotein.
Length = 378
Score = 33.5 bits (73), Expect = 0.14
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = -1
Query: 467 VRSKCPSFINKTGICIMDTKNTFKIVSKDNIVTTIPKKECVFELYLKKFKVTLFGKLLCA 288
V+S P+ +N + I TK T +VS N +KE V +L K + L+G+L
Sbjct: 162 VKSYVPAEVNYSEIWNSKTKETLWMVSNGNAQNK--RKELVEKLIKKGMSIDLYGQLYKK 219
Query: 287 KPAE 276
+PAE
Sbjct: 220 EPAE 223
>Z66498-5|CAA91294.2| 513|Caenorhabditis elegans Hypothetical
protein C26D10.6a protein.
Length = 513
Score = 29.5 bits (63), Expect = 2.2
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 536 SKNWETLTLSLYKADYHGCMLTVVRSK 456
S+NWE++ L Y YHG ++ V+ +
Sbjct: 261 SRNWESMLLGTYHRVYHGSWISSVKGR 287
>Z54327-14|CAA91124.2| 513|Caenorhabditis elegans Hypothetical
protein C26D10.6a protein.
Length = 513
Score = 29.5 bits (63), Expect = 2.2
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 536 SKNWETLTLSLYKADYHGCMLTVVRSK 456
S+NWE++ L Y YHG ++ V+ +
Sbjct: 261 SRNWESMLLGTYHRVYHGSWISSVKGR 287
>U13070-10|AAC46644.3| 294|Caenorhabditis elegans Hypothetical
protein F01F1.10a protein.
Length = 294
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -2
Query: 355 KNVYSNCI*KNSKLHYLGSCCVQNQLNALQRKSKDTCILIY 233
K ++ + + N KLH+ QN+LN + RK D C IY
Sbjct: 184 KVIWYDSVLDNGKLHW------QNELNEMNRKFYDACDAIY 218
>U13070-9|AAU05578.1| 388|Caenorhabditis elegans Hypothetical
protein F01F1.10c protein.
Length = 388
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -2
Query: 355 KNVYSNCI*KNSKLHYLGSCCVQNQLNALQRKSKDTCILIY 233
K ++ + + N KLH+ QN+LN + RK D C IY
Sbjct: 139 KVIWYDSVLDNGKLHW------QNELNEMNRKFYDACDAIY 173
>U13070-8|AAN84828.1| 433|Caenorhabditis elegans Hypothetical
protein F01F1.10b protein.
Length = 433
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -2
Query: 355 KNVYSNCI*KNSKLHYLGSCCVQNQLNALQRKSKDTCILIY 233
K ++ + + N KLH+ QN+LN + RK D C IY
Sbjct: 184 KVIWYDSVLDNGKLHW------QNELNEMNRKFYDACDAIY 218
>AB079783-1|BAB84821.1| 433|Caenorhabditis elegans
endo-beta-N-acetylglucosaminidase protein.
Length = 433
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -2
Query: 355 KNVYSNCI*KNSKLHYLGSCCVQNQLNALQRKSKDTCILIY 233
K ++ + + N KLH+ QN+LN + RK D C IY
Sbjct: 184 KVIWYDSVLDNGKLHW------QNELNEMNRKFYDACDAIY 218
>Z79755-9|CAC42297.1| 143|Caenorhabditis elegans Hypothetical
protein F43G9.13 protein.
Length = 143
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +1
Query: 313 VTLNFFKYNSNTHSFLGIVVTILSLETILKVFFVSIMHIPVLLI 444
+TL+ F + S + + + TILSL T+ K +V + IP +++
Sbjct: 45 ITLSIFLWMSLSFMVISLGATILSLFTLRKHPYVCFIPIPFIIM 88
>Z79600-5|CAB01878.2| 412|Caenorhabditis elegans Hypothetical
protein F59C6.7 protein.
Length = 412
Score = 27.5 bits (58), Expect = 9.0
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = +1
Query: 70 YISN*NVIDKLQRTNYQNVYILLVILY 150
YI N ++DKL+ NY++ ++ L ++Y
Sbjct: 33 YIKNEELVDKLKLLNYEDGFLKLGVVY 59
>AF520567-1|AAM75345.1| 412|Caenorhabditis elegans intraflagellar
transport proteinCHE-13 protein.
Length = 412
Score = 27.5 bits (58), Expect = 9.0
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = +1
Query: 70 YISN*NVIDKLQRTNYQNVYILLVILY 150
YI N ++DKL+ NY++ ++ L ++Y
Sbjct: 33 YIKNEELVDKLKLLNYEDGFLKLGVVY 59
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,649,774
Number of Sequences: 27780
Number of extensions: 319019
Number of successful extensions: 755
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 755
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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