Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_pT_M17
(878 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 25 1.2
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 24 1.6
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 23 2.8
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 23 2.8
DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate r... 23 3.7
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 23 4.9
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 23 4.9
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 23 4.9
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 23 4.9
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 23 4.9
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 23 4.9
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 23 4.9
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 23 4.9
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 23 4.9
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 22 6.5
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 6.5
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 6.5
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 6.5
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 6.5
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 6.5
AB006152-1|BAA24504.1| 178|Apis mellifera inositol 1,4,5-tripho... 22 6.5
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 22 8.6
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 22 8.6
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 22 8.6
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 22 8.6
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 22 8.6
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 22 8.6
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 22 8.6
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 22 8.6
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 22 8.6
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 22 8.6
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 22 8.6
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 22 8.6
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 8.6
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 22 8.6
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 22 8.6
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 22 8.6
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 22 8.6
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 22 8.6
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 8.6
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 24.6 bits (51), Expect = 1.2
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -3
Query: 114 DNYTFNNEHVYHNTYNLY 61
+NY ++N + Y+N YN Y
Sbjct: 87 NNYNYSNYNNYNNNYNNY 104
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 24.2 bits (50), Expect = 1.6
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -3
Query: 114 DNYTFNNEHVYHNTYNLY 61
+NY ++N + Y+N YN Y
Sbjct: 320 NNYKYSNYNNYNNNYNNY 337
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 2.8
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 803 FNKERRNEKIQMKKKIKAHEEKNVKHNT 720
+ K+RR EK+ +K+ E N K N+
Sbjct: 12 YRKDRRYEKLHNEKEKLLEERTNRKRNS 39
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 2.8
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 803 FNKERRNEKIQMKKKIKAHEEKNVKHNT 720
+ K+RR EK+ +K+ E N K N+
Sbjct: 12 YRKDRRYEKLHNEKEKLLEERTNRKRNS 39
>DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate
receptor protein.
Length = 322
Score = 23.0 bits (47), Expect = 3.7
Identities = 7/22 (31%), Positives = 15/22 (68%)
Frame = -3
Query: 564 RSIQSPKIW*IKKKSLETHGHQ 499
+S++ ++W K K+ E HG++
Sbjct: 191 QSVEKSELWVYKSKASEEHGNK 212
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.6 bits (46), Expect = 4.9
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -3
Query: 114 DNYTFNNEHVYHNTYN 67
+NY ++N + Y+N YN
Sbjct: 87 NNYKYSNYNNYNNNYN 102
Score = 21.8 bits (44), Expect = 8.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -3
Query: 120 NCDNYTFNNEHVYHNTYN 67
N +NY N + Y+N YN
Sbjct: 93 NYNNYNNNYNNNYNNNYN 110
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.6 bits (46), Expect = 4.9
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -3
Query: 114 DNYTFNNEHVYHNTYN 67
+NY ++N + Y+N YN
Sbjct: 87 NNYKYSNYNNYNNNYN 102
Score = 21.8 bits (44), Expect = 8.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -3
Query: 120 NCDNYTFNNEHVYHNTYN 67
N +NY N + Y+N YN
Sbjct: 93 NYNNYNNNYNNNYNNNYN 110
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.9
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -3
Query: 114 DNYTFNNEHVYHNTYN 67
+NY ++N + Y+N YN
Sbjct: 87 NNYKYSNYNNYNNNYN 102
Score = 21.8 bits (44), Expect = 8.6
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 464 PPKFERFIRPMALRFK 417
P F RFI P A RF+
Sbjct: 154 PTPFPRFIPPNAYRFR 169
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.9
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -3
Query: 114 DNYTFNNEHVYHNTYN 67
+NY ++N + Y+N YN
Sbjct: 87 NNYKYSNYNNYNNNYN 102
Score = 21.8 bits (44), Expect = 8.6
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 464 PPKFERFIRPMALRFK 417
P F RFI P A RF+
Sbjct: 154 PTPFPRFIPPNAYRFR 169
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.9
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -3
Query: 114 DNYTFNNEHVYHNTYN 67
+NY ++N + Y+N YN
Sbjct: 87 NNYKYSNYNNYNNNYN 102
Score = 21.8 bits (44), Expect = 8.6
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 464 PPKFERFIRPMALRFK 417
P F RFI P A RF+
Sbjct: 154 PTPFPRFIPPNAYRFR 169
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.9
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -3
Query: 114 DNYTFNNEHVYHNTYN 67
+NY ++N + Y+N YN
Sbjct: 87 NNYKYSNYNNYNNNYN 102
Score = 21.8 bits (44), Expect = 8.6
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 464 PPKFERFIRPMALRFK 417
P F RFI P A RF+
Sbjct: 154 PTPFPRFIPPNAYRFR 169
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.9
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -3
Query: 114 DNYTFNNEHVYHNTYN 67
+NY ++N + Y+N YN
Sbjct: 87 NNYKYSNYNNYNNNYN 102
Score = 21.8 bits (44), Expect = 8.6
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 464 PPKFERFIRPMALRFK 417
P F RFI P A RF+
Sbjct: 154 PTPFPRFIPPNAYRFR 169
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.9
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -3
Query: 114 DNYTFNNEHVYHNTYN 67
+NY ++N + Y+N YN
Sbjct: 87 NNYKYSNYNNYNNNYN 102
Score = 21.8 bits (44), Expect = 8.6
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 464 PPKFERFIRPMALRFK 417
P F RFI P A RF+
Sbjct: 154 PTPFPRFIPPNAYRFR 169
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.9
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -3
Query: 114 DNYTFNNEHVYHNTYN 67
+NY ++N + Y+N YN
Sbjct: 87 NNYKYSNYNNYNNNYN 102
Score = 21.8 bits (44), Expect = 8.6
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 464 PPKFERFIRPMALRFK 417
P F RFI P A RF+
Sbjct: 154 PTPFPRFIPPNAYRFR 169
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 22.2 bits (45), Expect = 6.5
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = -3
Query: 405 HTS*TKSYFLFTYNRSQEE 349
++S T++YF+ YN +QE+
Sbjct: 12 NSSITETYFVSAYNLNQED 30
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 6.5
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 464 PPKFERFIRPMALRFK 417
P F RFI P A RF+
Sbjct: 381 PTSFPRFIPPNAYRFR 396
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 6.5
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 464 PPKFERFIRPMALRFK 417
P F RFI P A RF+
Sbjct: 381 PTSFPRFIPPNAYRFR 396
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 6.5
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 464 PPKFERFIRPMALRFK 417
P F RFI P A RF+
Sbjct: 381 PTSFPRFIPPNAYRFR 396
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 6.5
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 464 PPKFERFIRPMALRFK 417
P F RFI P A RF+
Sbjct: 381 PTSFPRFIPPNAYRFR 396
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.2 bits (45), Expect = 6.5
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 464 PPKFERFIRPMALRFK 417
P F RFI P A RF+
Sbjct: 370 PTSFPRFIPPNAYRFR 385
>AB006152-1|BAA24504.1| 178|Apis mellifera inositol
1,4,5-triphosphate recepter protein.
Length = 178
Score = 22.2 bits (45), Expect = 6.5
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = -3
Query: 564 RSIQSPKIW*IKKKSLETHG 505
+S++ ++W K K+ E HG
Sbjct: 159 QSVEKSELWVYKSKASEEHG 178
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 8.6
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 464 PPKFERFIRPMALRFK 417
P F RFI P A RF+
Sbjct: 152 PTPFPRFIPPNAYRFR 167
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 8.6
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 464 PPKFERFIRPMALRFK 417
P F RFI P A RF+
Sbjct: 152 PTPFPRFIPPNAYRFR 167
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 8.6
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 464 PPKFERFIRPMALRFK 417
P F RFI P A RF+
Sbjct: 152 PTPFPRFIPPNAYRFR 167
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 8.6
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 464 PPKFERFIRPMALRFK 417
P F RFI P A RF+
Sbjct: 158 PTPFPRFIPPNAYRFR 173
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.8 bits (44), Expect = 8.6
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 464 PPKFERFIRPMALRFK 417
P F RFI P A RF+
Sbjct: 153 PTPFPRFIPPNAYRFR 168
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.8 bits (44), Expect = 8.6
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 464 PPKFERFIRPMALRFK 417
P F RFI P A RF+
Sbjct: 153 PTPFPRFIPPNAYRFR 168
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 8.6
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 464 PPKFERFIRPMALRFK 417
P F RFI P A RF+
Sbjct: 162 PTPFPRFIPPNAYRFR 177
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.6
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 464 PPKFERFIRPMALRFK 417
P F RFI P A RF+
Sbjct: 154 PTPFPRFIPPNAYRFR 169
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.8 bits (44), Expect = 8.6
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3
Query: 120 NCDNYTFNNEHVYHNTYNLY 61
N +N +NN + +N YN Y
Sbjct: 95 NYNNNNYNNYNYNNNNYNNY 114
Score = 21.8 bits (44), Expect = 8.6
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 464 PPKFERFIRPMALRFK 417
P F RFI P A RF+
Sbjct: 164 PTPFPRFIPPNAYRFR 179
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.8 bits (44), Expect = 8.6
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 464 PPKFERFIRPMALRFK 417
P F RFI P A RF+
Sbjct: 373 PTPFPRFIPPNAYRFR 388
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.8 bits (44), Expect = 8.6
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 464 PPKFERFIRPMALRFK 417
P F RFI P A RF+
Sbjct: 379 PTPFPRFIPPNAYRFR 394
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.8 bits (44), Expect = 8.6
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 464 PPKFERFIRPMALRFK 417
P F RFI P A RF+
Sbjct: 379 PTPFPRFIPPNAYRFR 394
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.8 bits (44), Expect = 8.6
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 464 PPKFERFIRPMALRFK 417
P F RFI P A RF+
Sbjct: 399 PTPFPRFIPPNAYRFR 414
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.8 bits (44), Expect = 8.6
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 464 PPKFERFIRPMALRFK 417
P F RFI P A RF+
Sbjct: 369 PTPFPRFIPPNAYRFR 384
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 8.6
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 464 PPKFERFIRPMALRFK 417
P F RFI P A RF+
Sbjct: 380 PTPFPRFIPPNAYRFR 395
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 8.6
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 464 PPKFERFIRPMALRFK 417
P F RFI P A RF+
Sbjct: 380 PTPFPRFIPPNAYRFR 395
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.8 bits (44), Expect = 8.6
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 464 PPKFERFIRPMALRFK 417
P F RFI P A RF+
Sbjct: 369 PTPFPRFIPPNAYRFR 384
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 21.8 bits (44), Expect = 8.6
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 464 PPKFERFIRPMALRFK 417
P F RFI P A RF+
Sbjct: 391 PTPFPRFIPPNAYRFR 406
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.8 bits (44), Expect = 8.6
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = -3
Query: 132 LHLLNCDNYTFNNEHVYHNTYN 67
+H N Y +NN + +N YN
Sbjct: 323 IHNNNNYKYNYNNNNYNNNNYN 344
Score = 21.8 bits (44), Expect = 8.6
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 464 PPKFERFIRPMALRFK 417
P F RFI P A RF+
Sbjct: 401 PTPFPRFIPPNAYRFR 416
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 227,768
Number of Sequences: 438
Number of extensions: 5297
Number of successful extensions: 89
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 89
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28523595
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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