Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_pT_M07
(806 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014298-2148|AAF48453.1| 432|Drosophila melanogaster CG11654-P... 375 e-104
AY102668-1|AAM27497.1| 432|Drosophila melanogaster GM02466p pro... 369 e-102
X95636-1|CAA64892.1| 431|Drosophila melanogaster S-adenosyl-L-h... 364 e-101
AY113501-1|AAM29506.1| 492|Drosophila melanogaster RE58316p pro... 217 2e-56
AE014297-2277|AAF55367.2| 492|Drosophila melanogaster CG8956-PC... 217 2e-56
U31961-1|AAA84400.1| 504|Drosophila melanogaster S-adenosylhomo... 214 1e-55
AE014297-2278|AAS65160.1| 504|Drosophila melanogaster CG8956-PD... 214 1e-55
AE014296-509|AAF47685.1| 521|Drosophila melanogaster CG9977-PA ... 212 4e-55
BT010277-1|AAQ23595.1| 521|Drosophila melanogaster RE06911p pro... 210 1e-54
X13168-1|CAA31566.1| 527|Drosophila melanogaster S-adenosylhomo... 205 5e-53
AE014134-2641|AAN10914.1| 1931|Drosophila melanogaster CG18109-P... 32 1.1
AY864362-1|AAX38000.1| 522|Drosophila melanogaster hemomucin pr... 29 7.5
AY864360-1|AAX37998.1| 522|Drosophila melanogaster hemomucin pr... 29 7.5
AY864357-1|AAX37995.1| 522|Drosophila melanogaster hemomucin pr... 29 7.5
AY864356-1|AAX37994.1| 522|Drosophila melanogaster hemomucin pr... 29 7.5
>AE014298-2148|AAF48453.1| 432|Drosophila melanogaster CG11654-PA
protein.
Length = 432
Score = 375 bits (923), Expect = e-104
Identities = 177/228 (77%), Positives = 197/228 (86%), Gaps = 1/228 (0%)
Frame = -2
Query: 805 RATDIMIAGKVCVVAGYGDVGKGCAQAFKGFGGRVIVTEIDPINALQAAMEGFQVTTMEE 626
RATD+MIAGKVC VAGYGDVGKGCAQA KGFGGRVIVTE+DPINALQAAMEG++VTTMEE
Sbjct: 205 RATDVMIAGKVCCVAGYGDVGKGCAQALKGFGGRVIVTEVDPINALQAAMEGYEVTTMEE 264
Query: 625 AAEVGQIFVTTTGNIDIICKEHLLRMKDDAIVCNIGHFDCEIDVAWLDNNAK-KVNIKQH 449
A++ IFVTTTG DII HL +M DDAIVCNIGHFD EIDV WL+ NAK KVN+K
Sbjct: 265 ASKEASIFVTTTGCRDIITSVHLQQMPDDAIVCNIGHFDIEIDVDWLNANAKEKVNVKPQ 324
Query: 448 VDRYELENGNHIIVLAAGRLVNLGCATGHSSFVMSNSFTNQVLAQIELWTKADTYPIGVH 269
VDRY +++G HII+LA GRLVNLGCA GH SFVMSNSFTNQVLAQIELWTK+D Y +GVH
Sbjct: 325 VDRYTMQSGKHIILLAEGRLVNLGCAHGHPSFVMSNSFTNQVLAQIELWTKSDKYAVGVH 384
Query: 268 TLPKKLDEEVAALHLDHLGVKLTKLTPKQAKYIGVSREGPYKPDHYRY 125
LPK LDEEVA+LHL+ LGVKLTKLT KQA Y+GVS+ GP+KPDHYRY
Sbjct: 385 VLPKILDEEVASLHLEKLGVKLTKLTEKQATYLGVSQTGPFKPDHYRY 432
>AY102668-1|AAM27497.1| 432|Drosophila melanogaster GM02466p
protein.
Length = 432
Score = 369 bits (909), Expect = e-102
Identities = 175/228 (76%), Positives = 196/228 (85%), Gaps = 1/228 (0%)
Frame = -2
Query: 805 RATDIMIAGKVCVVAGYGDVGKGCAQAFKGFGGRVIVTEIDPINALQAAMEGFQVTTMEE 626
RATD+MIAGKVC VAGYGDVGKGCAQA KGFGGRVIVTE+DPINALQAAMEG++VTTMEE
Sbjct: 205 RATDVMIAGKVCCVAGYGDVGKGCAQALKGFGGRVIVTEVDPINALQAAMEGYEVTTMEE 264
Query: 625 AAEVGQIFVTTTGNIDIICKEHLLRMKDDAIVCNIGHFDCEIDVAWLDNNAK-KVNIKQH 449
A++ IFVTTTG DII HL +M DDAIVCNIGHFD EIDV WL+ NAK KVN+K
Sbjct: 265 ASKEASIFVTTTGCRDIITSVHLQQMPDDAIVCNIGHFDIEIDVDWLNANAKEKVNVKPQ 324
Query: 448 VDRYELENGNHIIVLAAGRLVNLGCATGHSSFVMSNSFTNQVLAQIELWTKADTYPIGVH 269
V R+ +++G HII+LA GRLVNLGCA GH SFVMSNSFTNQVLAQIELWTK+D Y +GVH
Sbjct: 325 VIRHTMQSGKHIILLAEGRLVNLGCAHGHPSFVMSNSFTNQVLAQIELWTKSDKYAVGVH 384
Query: 268 TLPKKLDEEVAALHLDHLGVKLTKLTPKQAKYIGVSREGPYKPDHYRY 125
LPK LDEEVA+LHL+ LGVKLTKLT KQA Y+GVS+ GP+KPDHYRY
Sbjct: 385 VLPKILDEEVASLHLEKLGVKLTKLTEKQATYLGVSQTGPFKPDHYRY 432
>X95636-1|CAA64892.1| 431|Drosophila melanogaster
S-adenosyl-L-homocysteine hydrolaseprotein.
Length = 431
Score = 364 bits (896), Expect = e-101
Identities = 174/228 (76%), Positives = 194/228 (85%), Gaps = 1/228 (0%)
Frame = -2
Query: 805 RATDIMIAGKVCVVAGYGDVGKGCAQAFKGFGGRVIVTEIDPINALQAAMEGFQVTTMEE 626
RATD+MIAGKVC VAGYGDVGKGCAQA KGFGGRVIVTE+DPINALQAAMEG++VTTMEE
Sbjct: 205 RATDVMIAGKVCCVAGYGDVGKGCAQALKGFGGRVIVTEVDPINALQAAMEGYEVTTMEE 264
Query: 625 AAEVGQIFVTTTGNIDIICKEHLLRMKDDAIVCNIGHFDCEIDVAWLDNNAK-KVNIKQH 449
++ IFVTTTG DII HL +M DD IVCNIGHFD EIDV WL+ NAK KVN+K
Sbjct: 265 GSKEASIFVTTTGCRDIITSVHLQQMPDDRIVCNIGHFDIEIDVDWLNANAKEKVNVKPQ 324
Query: 448 VDRYELENGNHIIVLAAGRLVNLGCATGHSSFVMSNSFTNQVLAQIELWTKADTYPIGVH 269
VDRY +++G HII+LA GRLVNLGCA GH SFVMSNSFTNQVLAQIELWTK+D +GVH
Sbjct: 325 VDRYTMKSGKHIILLAEGRLVNLGCADGHPSFVMSNSFTNQVLAQIELWTKSDK-SVGVH 383
Query: 268 TLPKKLDEEVAALHLDHLGVKLTKLTPKQAKYIGVSREGPYKPDHYRY 125
LPK LDEEVA+LHL+ LGVKLTKLT KQA Y+GVS+ GP+KPDHYRY
Sbjct: 384 VLPKILDEEVASLHLEKLGVKLTKLTEKQATYLGVSQTGPFKPDHYRY 431
>AY113501-1|AAM29506.1| 492|Drosophila melanogaster RE58316p
protein.
Length = 492
Score = 217 bits (529), Expect = 2e-56
Identities = 111/228 (48%), Positives = 150/228 (65%), Gaps = 1/228 (0%)
Frame = -2
Query: 805 RATDIMIAGKVCVVAGYGDVGKGCAQAFKGFGGRVIVTEIDPINALQAAMEGFQVTTMEE 626
R TDIM GK V+ GYGDVGKGCAQ+ KG G V VTE+DPI ALQAAM+GF+V + E
Sbjct: 266 RTTDIMFGGKQVVICGYGDVGKGCAQSLKGQGCIVYVTEVDPICALQAAMDGFRVVRLNE 325
Query: 625 AAEVGQIFVTTTGNIDIICKEHLLRMKDDAIVCNIGHFDCEIDVAWLDN-NAKKVNIKQH 449
+ VT TGN ++I ++H+ RMK+ I+CN+GH EIDV L ++
Sbjct: 326 VIRTVDVVVTATGNKNVITRDHMNRMKNGCILCNMGHSCSEIDVNGLHTPELTWERVRSQ 385
Query: 448 VDRYELENGNHIIVLAAGRLVNLGCATGHSSFVMSNSFTNQVLAQIELWTKADTYPIGVH 269
VD +G II+LA GRLVNL C+T SSFV+S + + Q LA IEL++ Y V+
Sbjct: 386 VDHIRWPDGRMIILLAEGRLVNLSCST-ISSFVVSVASSTQALALIELFSAPGRYKSDVY 444
Query: 268 TLPKKLDEEVAALHLDHLGVKLTKLTPKQAKYIGVSREGPYKPDHYRY 125
LPKK+DE VA+LHL LT+LT +Q+K++G+++ GP+K ++YRY
Sbjct: 445 LLPKKMDEYVASLHLATFDAHLTELTDEQSKFMGLNKAGPFKANYYRY 492
>AE014297-2277|AAF55367.2| 492|Drosophila melanogaster CG8956-PC,
isoform C protein.
Length = 492
Score = 217 bits (529), Expect = 2e-56
Identities = 111/228 (48%), Positives = 150/228 (65%), Gaps = 1/228 (0%)
Frame = -2
Query: 805 RATDIMIAGKVCVVAGYGDVGKGCAQAFKGFGGRVIVTEIDPINALQAAMEGFQVTTMEE 626
R TDIM GK V+ GYGDVGKGCAQ+ KG G V VTE+DPI ALQAAM+GF+V + E
Sbjct: 266 RTTDIMFGGKQVVICGYGDVGKGCAQSLKGQGCIVYVTEVDPICALQAAMDGFRVVRLNE 325
Query: 625 AAEVGQIFVTTTGNIDIICKEHLLRMKDDAIVCNIGHFDCEIDVAWLDN-NAKKVNIKQH 449
+ VT TGN ++I ++H+ RMK+ I+CN+GH EIDV L ++
Sbjct: 326 VIRTVDVVVTATGNKNVITRDHMNRMKNGCILCNMGHSCSEIDVNGLHTPELTWERVRSQ 385
Query: 448 VDRYELENGNHIIVLAAGRLVNLGCATGHSSFVMSNSFTNQVLAQIELWTKADTYPIGVH 269
VD +G II+LA GRLVNL C+T SSFV+S + + Q LA IEL++ Y V+
Sbjct: 386 VDHIRWPDGRMIILLAEGRLVNLSCST-ISSFVVSVASSTQALALIELFSAPGRYKSDVY 444
Query: 268 TLPKKLDEEVAALHLDHLGVKLTKLTPKQAKYIGVSREGPYKPDHYRY 125
LPKK+DE VA+LHL LT+LT +Q+K++G+++ GP+K ++YRY
Sbjct: 445 LLPKKMDEYVASLHLATFDAHLTELTDEQSKFMGLNKAGPFKANYYRY 492
>U31961-1|AAA84400.1| 504|Drosophila melanogaster
S-adenosylhomocysteine hydrolase protein.
Length = 504
Score = 214 bits (522), Expect = 1e-55
Identities = 110/227 (48%), Positives = 149/227 (65%), Gaps = 1/227 (0%)
Frame = -2
Query: 805 RATDIMIAGKVCVVAGYGDVGKGCAQAFKGFGGRVIVTEIDPINALQAAMEGFQVTTMEE 626
R TDIM GK V+ GYGDVGKGCAQ+ KG G V VTE+DPI ALQAAM+GF+V + E
Sbjct: 266 RTTDIMFGGKQVVICGYGDVGKGCAQSLKGQGCIVYVTEVDPICALQAAMDGFRVVRLNE 325
Query: 625 AAEVGQIFVTTTGNIDIICKEHLLRMKDDAIVCNIGHFDCEIDVAWLDN-NAKKVNIKQH 449
+ VT TGN ++I ++H+ RMK+ I+CN+GH EIDV L ++
Sbjct: 326 VIRTVDVVVTATGNKNVITRDHMNRMKNGCILCNMGHSCSEIDVNGLHTPELTWERVRSQ 385
Query: 448 VDRYELENGNHIIVLAAGRLVNLGCATGHSSFVMSNSFTNQVLAQIELWTKADTYPIGVH 269
VD +G II+LA GRLVNL C+T SSFV+S + + Q LA IEL++ Y V+
Sbjct: 386 VDHIRWPDGRMIILLAEGRLVNLSCST-ISSFVVSVASSTQALALIELFSAPGRYKSDVY 444
Query: 268 TLPKKLDEEVAALHLDHLGVKLTKLTPKQAKYIGVSREGPYKPDHYR 128
LPKK+DE VA+LHL LT+LT +Q+K++G+++ GP+K ++YR
Sbjct: 445 LLPKKMDEYVASLHLATFDAHLTELTDEQSKFMGLNKAGPFKANYYR 491
>AE014297-2278|AAS65160.1| 504|Drosophila melanogaster CG8956-PD,
isoform D protein.
Length = 504
Score = 214 bits (522), Expect = 1e-55
Identities = 110/227 (48%), Positives = 149/227 (65%), Gaps = 1/227 (0%)
Frame = -2
Query: 805 RATDIMIAGKVCVVAGYGDVGKGCAQAFKGFGGRVIVTEIDPINALQAAMEGFQVTTMEE 626
R TDIM GK V+ GYGDVGKGCAQ+ KG G V VTE+DPI ALQAAM+GF+V + E
Sbjct: 266 RTTDIMFGGKQVVICGYGDVGKGCAQSLKGQGCIVYVTEVDPICALQAAMDGFRVVRLNE 325
Query: 625 AAEVGQIFVTTTGNIDIICKEHLLRMKDDAIVCNIGHFDCEIDVAWLDN-NAKKVNIKQH 449
+ VT TGN ++I ++H+ RMK+ I+CN+GH EIDV L ++
Sbjct: 326 VIRTVDVVVTATGNKNVITRDHMNRMKNGCILCNMGHSCSEIDVNGLHTPELTWERVRSQ 385
Query: 448 VDRYELENGNHIIVLAAGRLVNLGCATGHSSFVMSNSFTNQVLAQIELWTKADTYPIGVH 269
VD +G II+LA GRLVNL C+T SSFV+S + + Q LA IEL++ Y V+
Sbjct: 386 VDHIRWPDGRMIILLAEGRLVNLSCST-ISSFVVSVASSTQALALIELFSAPGRYKSDVY 444
Query: 268 TLPKKLDEEVAALHLDHLGVKLTKLTPKQAKYIGVSREGPYKPDHYR 128
LPKK+DE VA+LHL LT+LT +Q+K++G+++ GP+K ++YR
Sbjct: 445 LLPKKMDEYVASLHLATFDAHLTELTDEQSKFMGLNKAGPFKANYYR 491
>AE014296-509|AAF47685.1| 521|Drosophila melanogaster CG9977-PA
protein.
Length = 521
Score = 212 bits (518), Expect = 4e-55
Identities = 111/229 (48%), Positives = 149/229 (65%), Gaps = 2/229 (0%)
Frame = -2
Query: 805 RATDIMIAGKVCVVAGYGDVGKGCAQAFKGFGGRVIVTEIDPINALQAAMEGFQVTTMEE 626
R+TD+M GK VV GYGDVGKGCAQA KG G V +TEIDPI ALQA+M+GF+V + E
Sbjct: 294 RSTDVMFGGKQVVVCGYGDVGKGCAQALKGQGCIVYITEIDPICALQASMDGFRVVKLNE 353
Query: 625 AAEVGQIFVTTTGNIDIICKEHLLRMKDDAIVCNIGHFDCEIDVAWLDN-NAKKVNIKQH 449
I VT TGN +++ +EH+ +MK IVCN+GH + EIDV L + ++
Sbjct: 354 VIRNVDIVVTATGNKNVVVREHMDKMKSGCIVCNMGHSNTEIDVNGLRTPDLTWEKVRSQ 413
Query: 448 VDRYELENGNHIIVLAAGRLVNLGCATGHSSFVMSNSFTNQVLAQIELW-TKADTYPIGV 272
VD G +II+LA GRLVNL C++ SF +S + Q LA IEL+ Y V
Sbjct: 414 VDHIIWPEGKYIILLAEGRLVNLSCSS-IPSFAVSITSATQALALIELFNAPPGRYKSDV 472
Query: 271 HTLPKKLDEEVAALHLDHLGVKLTKLTPKQAKYIGVSREGPYKPDHYRY 125
+ LPKK+DE VA+LHL LT+L+ +QAKY+G+++ GP+KP++YRY
Sbjct: 473 YLLPKKMDEYVASLHLPTFDAHLTELSDEQAKYMGLNKAGPFKPNYYRY 521
>BT010277-1|AAQ23595.1| 521|Drosophila melanogaster RE06911p
protein.
Length = 521
Score = 210 bits (514), Expect = 1e-54
Identities = 110/229 (48%), Positives = 149/229 (65%), Gaps = 2/229 (0%)
Frame = -2
Query: 805 RATDIMIAGKVCVVAGYGDVGKGCAQAFKGFGGRVIVTEIDPINALQAAMEGFQVTTMEE 626
R+TD+M GK VV GYGDVGKGCAQA KG G V +TEIDPI ALQA+M+GF+V + E
Sbjct: 294 RSTDVMFGGKQVVVCGYGDVGKGCAQALKGQGCIVYITEIDPICALQASMDGFRVVKLNE 353
Query: 625 AAEVGQIFVTTTGNIDIICKEHLLRMKDDAIVCNIGHFDCEIDVAWLDN-NAKKVNIKQH 449
I VT TGN +++ +EH+ +MK IVCN+GH + EIDV L + ++
Sbjct: 354 VIRNVDIVVTATGNKNVVVREHMDKMKSGCIVCNMGHSNTEIDVNGLRTPDLTWEKVRSQ 413
Query: 448 VDRYELENGNHIIVLAAGRLVNLGCATGHSSFVMSNSFTNQVLAQIELW-TKADTYPIGV 272
VD G +II+LA GRLVNL C++ SF +S + Q LA IEL+ Y V
Sbjct: 414 VDHIIWPEGKYIILLAEGRLVNLSCSS-IPSFAVSITSATQALALIELFNAPPGRYKSDV 472
Query: 271 HTLPKKLDEEVAALHLDHLGVKLTKLTPKQAKYIGVSREGPYKPDHYRY 125
+ LPKK+DE VA+LHL LT+L+ ++AKY+G+++ GP+KP++YRY
Sbjct: 473 YLLPKKMDEYVASLHLPTFDAHLTELSDEKAKYMGLNKAGPFKPNYYRY 521
>X13168-1|CAA31566.1| 527|Drosophila melanogaster
S-adenosylhomocysteine hydrolase protein.
Length = 527
Score = 205 bits (501), Expect = 5e-53
Identities = 108/223 (48%), Positives = 144/223 (64%), Gaps = 1/223 (0%)
Frame = -2
Query: 805 RATDIMIAGKVCVVAGYGDVGKGCAQAFKGFGGRVIVTEIDPINALQAAMEGFQVTTMEE 626
R TDIM GK V+ GYGDVGKGCAQ+ KG G V VTE+DPI ALQAAM+GF+V + E
Sbjct: 266 RTTDIMFGGKQVVICGYGDVGKGCAQSLKGQGCIVYVTEVDPICALQAAMDGFRVVRLNE 325
Query: 625 AAEVGQIFVTTTGNIDIICKEHLLRMKDDAIVCNIGHFDCEIDVAWLDN-NAKKVNIKQH 449
+ VT TGN ++I ++H+ RMK+ I+CN+GH EIDV L ++
Sbjct: 326 VIRTVDVVVTATGNKNVITRDHMNRMKNGCILCNMGHSCSEIDVNGLHTPELTWERVRSQ 385
Query: 448 VDRYELENGNHIIVLAAGRLVNLGCATGHSSFVMSNSFTNQVLAQIELWTKADTYPIGVH 269
VD +G II+LA GRLVNL C+T SSFV+S + + Q LA IEL++ Y V+
Sbjct: 386 VDHIRWPDGRMIILLAEGRLVNLSCST-ISSFVVSVASSTQALALIELFSAPGRYKSDVY 444
Query: 268 TLPKKLDEEVAALHLDHLGVKLTKLTPKQAKYIGVSREGPYKP 140
LPKK+DE VA+LHL LT+LT +Q+K++G+++ G KP
Sbjct: 445 LLPKKMDEYVASLHLATFDAHLTELTDEQSKFMGLNKAGLLKP 487
>AE014134-2641|AAN10914.1| 1931|Drosophila melanogaster CG18109-PA
protein.
Length = 1931
Score = 31.9 bits (69), Expect = 1.1
Identities = 22/70 (31%), Positives = 29/70 (41%)
Frame = -1
Query: 224 GSPWCKTDEVNT*TSQIHWCLSRRTLQARSLQILTCC*SMYVLLNVKEEKKSYLIKNNLI 45
G P+ K + TS++ R +L S QIL C S +LN EE Y + I
Sbjct: 1099 GKPYPKNLRYTSETSELSESSERESLSRNSNQILYLCKSCNAMLNYSEEVNKYFAGDFCI 1158
Query: 44 QXILKNVIDR 15
V DR
Sbjct: 1159 NKKKFKVSDR 1168
>AY864362-1|AAX38000.1| 522|Drosophila melanogaster hemomucin
protein.
Length = 522
Score = 29.1 bits (62), Expect = 7.5
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = +3
Query: 612 PTSAASSIVVT*KPSIAA*SALMGSISVTITLPPKPLNAWAHPFPTSP*P 761
PT+ ++ T KP+ S + T T PKP PT+P P
Sbjct: 448 PTTTTTTTTTTPKPTTTKPPTAKPSTTTTTTTTPKPTTTTTPTTPTTPTP 497
>AY864360-1|AAX37998.1| 522|Drosophila melanogaster hemomucin
protein.
Length = 522
Score = 29.1 bits (62), Expect = 7.5
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = +3
Query: 612 PTSAASSIVVT*KPSIAA*SALMGSISVTITLPPKPLNAWAHPFPTSP*P 761
PT+ ++ T KP+ S + T T PKP PT+P P
Sbjct: 448 PTTTTTTTTTTPKPTTTKPPTAKPSTTTTTTTTPKPTTTTTPTTPTTPTP 497
>AY864357-1|AAX37995.1| 522|Drosophila melanogaster hemomucin
protein.
Length = 522
Score = 29.1 bits (62), Expect = 7.5
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = +3
Query: 612 PTSAASSIVVT*KPSIAA*SALMGSISVTITLPPKPLNAWAHPFPTSP*P 761
PT+ ++ T KP+ S + T T PKP PT+P P
Sbjct: 448 PTTTTTTTTTTPKPTTTKPPTAKPSTTTTTTTTPKPTTTTTPTTPTTPTP 497
>AY864356-1|AAX37994.1| 522|Drosophila melanogaster hemomucin
protein.
Length = 522
Score = 29.1 bits (62), Expect = 7.5
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = +3
Query: 612 PTSAASSIVVT*KPSIAA*SALMGSISVTITLPPKPLNAWAHPFPTSP*P 761
PT+ ++ T KP+ S + T T PKP PT+P P
Sbjct: 448 PTTTTTTTTTTPKPTTTKPPTAKPSTTTTTTTTPKPTTTTTPTTPTTPTP 497
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,832,994
Number of Sequences: 53049
Number of extensions: 770814
Number of successful extensions: 1850
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1832
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3777934368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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