Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_pT_M07
(806 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S57284-1|AAB25906.1| 437|Caenorhabditis elegans S-adenosylhomoc... 337 5e-93
M64306-1|AAA28062.1| 437|Caenorhabditis elegans S-adenosylhomoc... 337 5e-93
AF043699-5|AAB97565.1| 437|Caenorhabditis elegans Hypothetical ... 337 5e-93
U41749-1|AAB52488.2| 248|Caenorhabditis elegans Dehydrogenases,... 32 0.56
Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z48045-11|CAM33500.1| 887|Caenorhabditis elegans Hypothetical p... 28 9.0
Z48045-10|CAA88101.2| 849|Caenorhabditis elegans Hypothetical p... 28 9.0
U28941-3|AAM98025.1| 799|Caenorhabditis elegans Temporarily ass... 28 9.0
U28941-2|AAC71103.1| 1091|Caenorhabditis elegans Temporarily ass... 28 9.0
U28941-1|AAC71102.1| 1107|Caenorhabditis elegans Temporarily ass... 28 9.0
>S57284-1|AAB25906.1| 437|Caenorhabditis elegans
S-adenosylhomocysteine hydrolase protein.
Length = 437
Score = 337 bits (829), Expect = 5e-93
Identities = 163/231 (70%), Positives = 185/231 (80%), Gaps = 4/231 (1%)
Frame = -2
Query: 805 RATDIMIAGKVCVVAGYGDVGKGCAQAFKGFGGRVIVTEIDPINALQAAMEGFQVTTMEE 626
RATD+M+AGKV VVAGYGDVGKG A + K FG RVIVTEIDPINALQAAMEG++VTT+EE
Sbjct: 207 RATDVMLAGKVAVVAGYGDVGKGSAASLKAFGSRVIVTEIDPINALQAAMEGYEVTTLEE 266
Query: 625 AAEVGQIFVTTTGNIDIICKEHLLRMKDDAIVCNIGHFDCEIDVAWLDNNA-KKVNIKQH 449
AA I VTTTG DI+ +H + +DAIVCN+GHFDCEIDV WL+ NA KK IK
Sbjct: 267 AAPKANIIVTTTGCKDIVTGKHFELLPNDAIVCNVGHFDCEIDVKWLNTNATKKDTIKPQ 326
Query: 448 VDRYELENGNHIIVLAAGRLVNLGCATGHSSFVMSNSFTNQVLAQIELWTKADT---YPI 278
VDRY L+NG H+I+LA GRLVNLGCATGH SFVMSNSFTNQVLAQ+ELWTK T Y +
Sbjct: 327 VDRYTLKNGRHVILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQVELWTKFGTPQEYKL 386
Query: 277 GVHTLPKKLDEEVAALHLDHLGVKLTKLTPKQAKYIGVSREGPYKPDHYRY 125
G++ LPK LDEEVA LHL LGVKLTKL+ +QA Y+GV GPYKPDHYRY
Sbjct: 387 GLYVLPKTLDEEVAYLHLAQLGVKLTKLSDEQASYLGVPVAGPYKPDHYRY 437
>M64306-1|AAA28062.1| 437|Caenorhabditis elegans
S-adenosylhomocysteine hydrolase protein.
Length = 437
Score = 337 bits (829), Expect = 5e-93
Identities = 163/231 (70%), Positives = 185/231 (80%), Gaps = 4/231 (1%)
Frame = -2
Query: 805 RATDIMIAGKVCVVAGYGDVGKGCAQAFKGFGGRVIVTEIDPINALQAAMEGFQVTTMEE 626
RATD+M+AGKV VVAGYGDVGKG A + K FG RVIVTEIDPINALQAAMEG++VTT+EE
Sbjct: 207 RATDVMLAGKVAVVAGYGDVGKGSAASLKAFGSRVIVTEIDPINALQAAMEGYEVTTLEE 266
Query: 625 AAEVGQIFVTTTGNIDIICKEHLLRMKDDAIVCNIGHFDCEIDVAWLDNNA-KKVNIKQH 449
AA I VTTTG DI+ +H + +DAIVCN+GHFDCEIDV WL+ NA KK IK
Sbjct: 267 AAPKANIIVTTTGCKDIVTGKHFELLPNDAIVCNVGHFDCEIDVKWLNTNATKKDTIKPQ 326
Query: 448 VDRYELENGNHIIVLAAGRLVNLGCATGHSSFVMSNSFTNQVLAQIELWTKADT---YPI 278
VDRY L+NG H+I+LA GRLVNLGCATGH SFVMSNSFTNQVLAQ+ELWTK T Y +
Sbjct: 327 VDRYTLKNGRHVILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQVELWTKFGTPQEYKL 386
Query: 277 GVHTLPKKLDEEVAALHLDHLGVKLTKLTPKQAKYIGVSREGPYKPDHYRY 125
G++ LPK LDEEVA LHL LGVKLTKL+ +QA Y+GV GPYKPDHYRY
Sbjct: 387 GLYVLPKTLDEEVAYLHLAQLGVKLTKLSDEQASYLGVPVAGPYKPDHYRY 437
>AF043699-5|AAB97565.1| 437|Caenorhabditis elegans Hypothetical
protein K02F2.2 protein.
Length = 437
Score = 337 bits (829), Expect = 5e-93
Identities = 163/231 (70%), Positives = 185/231 (80%), Gaps = 4/231 (1%)
Frame = -2
Query: 805 RATDIMIAGKVCVVAGYGDVGKGCAQAFKGFGGRVIVTEIDPINALQAAMEGFQVTTMEE 626
RATD+M+AGKV VVAGYGDVGKG A + K FG RVIVTEIDPINALQAAMEG++VTT+EE
Sbjct: 207 RATDVMLAGKVAVVAGYGDVGKGSAASLKAFGSRVIVTEIDPINALQAAMEGYEVTTLEE 266
Query: 625 AAEVGQIFVTTTGNIDIICKEHLLRMKDDAIVCNIGHFDCEIDVAWLDNNA-KKVNIKQH 449
AA I VTTTG DI+ +H + +DAIVCN+GHFDCEIDV WL+ NA KK IK
Sbjct: 267 AAPKANIIVTTTGCKDIVTGKHFELLPNDAIVCNVGHFDCEIDVKWLNTNATKKDTIKPQ 326
Query: 448 VDRYELENGNHIIVLAAGRLVNLGCATGHSSFVMSNSFTNQVLAQIELWTKADT---YPI 278
VDRY L+NG H+I+LA GRLVNLGCATGH SFVMSNSFTNQVLAQ+ELWTK T Y +
Sbjct: 327 VDRYTLKNGRHVILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQVELWTKFGTPQEYKL 386
Query: 277 GVHTLPKKLDEEVAALHLDHLGVKLTKLTPKQAKYIGVSREGPYKPDHYRY 125
G++ LPK LDEEVA LHL LGVKLTKL+ +QA Y+GV GPYKPDHYRY
Sbjct: 387 GLYVLPKTLDEEVAYLHLAQLGVKLTKLSDEQASYLGVPVAGPYKPDHYRY 437
>U41749-1|AAB52488.2| 248|Caenorhabditis elegans Dehydrogenases,
short chain protein25 protein.
Length = 248
Score = 31.9 bits (69), Expect = 0.56
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -2
Query: 790 MIAGKVCVVAGYGD-VGKGCAQAFKGFGGRVIVTEIDPINALQAA 659
++ G++ VV G +GK +Q G RV+V ++D NA A
Sbjct: 4 LLGGRIAVVTGGASGIGKAISQTLAKHGARVVVADLDSGNAAATA 48
>Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical
protein H05G16.1 protein.
Length = 1111
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = -2
Query: 322 LAQIELWTKADTYPIGVHTLPKKLDEEVAALHLDHLGVKL 203
LA +E+ + D Y + +H K +D AAL + HLG+K+
Sbjct: 222 LAMLEVARRCDFYGVKLHAA-KDIDGNDAALSVMHLGIKV 260
>Z48045-11|CAM33500.1| 887|Caenorhabditis elegans Hypothetical
protein C41C4.5b protein.
Length = 887
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 730 GRILFQRHHNLPLHKLSRQSL 792
G I Q HH++P+H+ SR SL
Sbjct: 729 GSISAQSHHSVPVHRASRVSL 749
>Z48045-10|CAA88101.2| 849|Caenorhabditis elegans Hypothetical
protein C41C4.5a protein.
Length = 849
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 730 GRILFQRHHNLPLHKLSRQSL 792
G I Q HH++P+H+ SR SL
Sbjct: 691 GSISAQSHHSVPVHRASRVSL 711
>U28941-3|AAM98025.1| 799|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform d protein.
Length = 799
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 253 LDEEVAALHLDHLGVKLTKLTPKQAKYIGVSRE 155
++EE+ +LH G KLTPK + SR+
Sbjct: 665 MEEEMLSLHEPETGSNKKKLTPKNPSFEATSRQ 697
>U28941-2|AAC71103.1| 1091|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform a protein.
Length = 1091
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 253 LDEEVAALHLDHLGVKLTKLTPKQAKYIGVSRE 155
++EE+ +LH G KLTPK + SR+
Sbjct: 665 MEEEMLSLHEPETGSNKKKLTPKNPSFEATSRQ 697
>U28941-1|AAC71102.1| 1107|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform b protein.
Length = 1107
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 253 LDEEVAALHLDHLGVKLTKLTPKQAKYIGVSRE 155
++EE+ +LH G KLTPK + SR+
Sbjct: 665 MEEEMLSLHEPETGSNKKKLTPKNPSFEATSRQ 697
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,587,520
Number of Sequences: 27780
Number of extensions: 401422
Number of successful extensions: 1016
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 970
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1010
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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