Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_pT_M05
(751 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99281-33|CAJ44242.1| 459|Caenorhabditis elegans Hypothetical p... 149 2e-36
Z99281-32|CAB16511.1| 444|Caenorhabditis elegans Hypothetical p... 149 2e-36
U00002-1|AAA17051.1| 444|Caenorhabditis elegans rabGDI protein. 149 2e-36
U39650-5|AAK39185.2| 632|Caenorhabditis elegans Hypothetical pr... 31 1.2
AL032655-5|CAA21723.1| 360|Caenorhabditis elegans Hypothetical ... 29 2.7
AF016676-6|AAG24108.1| 354|Caenorhabditis elegans Seven tm rece... 29 2.7
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 29 4.7
AC006832-2|AAO38580.1| 366|Caenorhabditis elegans Hypothetical ... 29 4.7
AC006832-1|AAO38581.1| 376|Caenorhabditis elegans Hypothetical ... 29 4.7
Z70286-4|CAA94291.2| 533|Caenorhabditis elegans Hypothetical pr... 28 6.2
AJ582070-1|CAE46540.1| 533|Caenorhabditis elegans flavin monoox... 28 6.2
Z81556-7|CAB04519.1| 569|Caenorhabditis elegans Hypothetical pr... 28 8.1
>Z99281-33|CAJ44242.1| 459|Caenorhabditis elegans Hypothetical
protein Y57G11C.10b protein.
Length = 459
Score = 149 bits (362), Expect = 2e-36
Identities = 68/113 (60%), Positives = 89/113 (78%), Gaps = 1/113 (0%)
Frame = -2
Query: 750 DIYXSVVSYTHQVAAKGWFIAMVSTTVETNDPESEIRPGLALLGAIRQKFVSVTDYYEPI 571
DIY S S T+ V KGW++AMVSTTVET +PE+E+ PGL LLGAI +KF+ ++D YEP
Sbjct: 347 DIYISCCSNTNMVTPKGWYLAMVSTTVETANPEAEVLPGLQLLGAIAEKFIQISDVYEPS 406
Query: 570 DDGSQSQIFISESYDATTHFETTCLDVLKIYKHGTGEEFDFSKV-KLELGEED 415
D GS+SQIFIS+SYDATTHFETTC DVL +++ GT +EFDF+ + L L +++
Sbjct: 407 DLGSESQIFISQSYDATTHFETTCKDVLNMFERGTTKEFDFTNITHLSLNDQE 459
>Z99281-32|CAB16511.1| 444|Caenorhabditis elegans Hypothetical
protein Y57G11C.10a protein.
Length = 444
Score = 149 bits (362), Expect = 2e-36
Identities = 68/113 (60%), Positives = 89/113 (78%), Gaps = 1/113 (0%)
Frame = -2
Query: 750 DIYXSVVSYTHQVAAKGWFIAMVSTTVETNDPESEIRPGLALLGAIRQKFVSVTDYYEPI 571
DIY S S T+ V KGW++AMVSTTVET +PE+E+ PGL LLGAI +KF+ ++D YEP
Sbjct: 332 DIYISCCSNTNMVTPKGWYLAMVSTTVETANPEAEVLPGLQLLGAIAEKFIQISDVYEPS 391
Query: 570 DDGSQSQIFISESYDATTHFETTCLDVLKIYKHGTGEEFDFSKV-KLELGEED 415
D GS+SQIFIS+SYDATTHFETTC DVL +++ GT +EFDF+ + L L +++
Sbjct: 392 DLGSESQIFISQSYDATTHFETTCKDVLNMFERGTTKEFDFTNITHLSLNDQE 444
>U00002-1|AAA17051.1| 444|Caenorhabditis elegans rabGDI protein.
Length = 444
Score = 149 bits (362), Expect = 2e-36
Identities = 68/113 (60%), Positives = 89/113 (78%), Gaps = 1/113 (0%)
Frame = -2
Query: 750 DIYXSVVSYTHQVAAKGWFIAMVSTTVETNDPESEIRPGLALLGAIRQKFVSVTDYYEPI 571
DIY S S T+ V KGW++AMVSTTVET +PE+E+ PGL LLGAI +KF+ ++D YEP
Sbjct: 332 DIYISCCSNTNMVTPKGWYLAMVSTTVETANPEAEVLPGLQLLGAIAEKFIQISDVYEPS 391
Query: 570 DDGSQSQIFISESYDATTHFETTCLDVLKIYKHGTGEEFDFSKV-KLELGEED 415
D GS+SQIFIS+SYDATTHFETTC DVL +++ GT +EFDF+ + L L +++
Sbjct: 392 DLGSESQIFISQSYDATTHFETTCKDVLNMFERGTTKEFDFTNITHLSLNDQE 444
>U39650-5|AAK39185.2| 632|Caenorhabditis elegans Hypothetical
protein C25A11.2 protein.
Length = 632
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = +1
Query: 349 NKQLNNKQYTYYFFMRPLSYLLILFTKFQLDFREIKFFPSTMF---INFKHIQT 501
N + + Q+T+Y P YLLI FQ++ R++ T+F ++ ++IQT
Sbjct: 341 NVKSHTSQFTFYLENSPNGYLLIAGGCFQMESRQLVNLKLTLFDSGVSCRNIQT 394
>AL032655-5|CAA21723.1| 360|Caenorhabditis elegans Hypothetical
protein Y6B3B.10 protein.
Length = 360
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +1
Query: 340 FSLNKQLNNKQYTYYFFMRPLSYLL--ILFTKFQLDFREIKFFPSTMF 477
F L K+ N + Y YYF M +++L I++ F+L + K +T++
Sbjct: 231 FYLKKRTNRQYYKYYFLMGNAAFILFAIIWVIFRLYWYTCKLLYATIY 278
>AF016676-6|AAG24108.1| 354|Caenorhabditis elegans Seven tm
receptor protein 253 protein.
Length = 354
Score = 29.5 bits (63), Expect = 2.7
Identities = 22/65 (33%), Positives = 32/65 (49%)
Frame = +1
Query: 385 FFMRPLSYLLILFTKFQLDFREIKFFPSTMFINFKHIQTSCFKVCGGIIRFRNKYLALAT 564
FF + ++LLI TK + R I F +FI F + + I F +YLAL++
Sbjct: 72 FFTKDSAFLLITNTKNSIFPRRISMFVEELFIGFYGLAMAIL-----AIHFIYRYLALSS 126
Query: 565 IIDWL 579
I WL
Sbjct: 127 NI-WL 130
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = -2
Query: 567 DGSQSQIFISESYDATTHFETTCLDVLKIYKHGTGEEFDFSKVKLELGEEDQ*ITERS 394
D + QIF+ + D + + V+K+Y GTGE+ D +K +L ED RS
Sbjct: 65 DREKDQIFLQTAEDLKEAIKFSRF-VVKLYAEGTGEK-DLKGLKKDLKSEDDEDDRRS 120
>AC006832-2|AAO38580.1| 366|Caenorhabditis elegans Hypothetical
protein ZK355.2a protein.
Length = 366
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -2
Query: 210 FQNIVGWLLFLSLIFISVELVCTS*KLFICYFVTDMHSNMVH 85
F+ ++GW L+L + + L +CYF D+ S+M+H
Sbjct: 103 FEWLIGWNTQLALFLSYTKAISL---LIVCYFYLDIASSMMH 141
>AC006832-1|AAO38581.1| 376|Caenorhabditis elegans Hypothetical
protein ZK355.2b protein.
Length = 376
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -2
Query: 210 FQNIVGWLLFLSLIFISVELVCTS*KLFICYFVTDMHSNMVH 85
F+ ++GW L+L + + L +CYF D+ S+M+H
Sbjct: 113 FEWLIGWNTQLALFLSYTKAISL---LIVCYFYLDIASSMMH 151
>Z70286-4|CAA94291.2| 533|Caenorhabditis elegans Hypothetical
protein K08C7.2 protein.
Length = 533
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 610 PNGTQKSQTRSDFRFRIIGLNSSRDHSNKPTLSCNLVSVGHN 735
PN QK + + DF+ RII +S +DH +V +G++
Sbjct: 156 PNWPQKFRGQDDFKGRIIHSHSYKDHRGYEDKVVVVVGIGNS 197
>AJ582070-1|CAE46540.1| 533|Caenorhabditis elegans flavin
monooxygenase protein.
Length = 533
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 610 PNGTQKSQTRSDFRFRIIGLNSSRDHSNKPTLSCNLVSVGHN 735
PN QK + + DF+ RII +S +DH +V +G++
Sbjct: 156 PNWPQKFRGQDDFKGRIIHSHSYKDHRGYEDKVVVVVGIGNS 197
>Z81556-7|CAB04519.1| 569|Caenorhabditis elegans Hypothetical
protein F58G1.7 protein.
Length = 569
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Frame = +1
Query: 337 GFSLNKQLNNKQYTYYFF-----MRPLSYLLILFTKFQLDFREIKFFPSTMFINF 486
GF++N L N + Y + M L L + FQL F +T+F+NF
Sbjct: 235 GFTVNFYLLNSSFQYQIYSPMPTMHKLRLTLTFYGVFQLFISIFIFLSATIFLNF 289
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,105,335
Number of Sequences: 27780
Number of extensions: 329965
Number of successful extensions: 719
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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