Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_pT_M03
         (663 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0903 - 28652447-28653346,28653890-28654056,28654075-286542...    31   1.1  
02_05_0075 - 25610386-25610508,25610529-25610583,25610801-256112...    31   1.1  
02_03_0315 - 17610605-17610855,17611304-17611370,17612876-176129...    30   1.9  
02_01_0745 - 5550472-5551053                                           30   1.9  
08_02_1457 + 27260841-27260965,27261126-27261246,27263455-272635...    29   4.4  
12_02_1215 + 27070164-27070302,27070308-27071098                       28   7.6  
05_04_0209 - 19073147-19074041,19074117-19074163,19074258-190744...    28   7.6  

>03_05_0903 -
           28652447-28653346,28653890-28654056,28654075-28654264,
           28654916-28655210,28655514-28655760,28656017-28656443
          Length = 741

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -2

Query: 638 ASSSPGEDEAYSPSRPMTPPAASVVPLADIALPSNLHEIL 519
           A+ SP    A +P+ P TPP    V  A + LPSN  + L
Sbjct: 37  AAGSPEAGAAVAPADPETPPPREPVGGARVELPSNPEDAL 76


>02_05_0075 -
           25610386-25610508,25610529-25610583,25610801-25611240,
           25612951-25613619,25614551-25615870
          Length = 868

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -2

Query: 653 RKIAQASSSPGEDEAYSPSRPMTPPAASV 567
           R I+  SS+P   ++ S S PM+PPA S+
Sbjct: 70  RSISSLSSAPASPDSSSVSNPMSPPAMSL 98


>02_03_0315 -
           17610605-17610855,17611304-17611370,17612876-17612941,
           17613037-17613158,17613245-17613428,17614262-17614494,
           17614580-17614913,17615043-17615186,17615303-17615344
          Length = 480

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 15/43 (34%), Positives = 19/43 (44%)
 Frame = -2

Query: 653 RKIAQASSSPGEDEAYSPSRPMTPPAASVVPLADIALPSNLHE 525
           R    A  +P + E  SP+ P   P A   P +  A  SN HE
Sbjct: 268 RPAPAARPAPPKPEKQSPAPPAPAPVADATPFSSNAESSNTHE 310


>02_01_0745 - 5550472-5551053
          Length = 193

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
 Frame = -2

Query: 614 EAYSPSRPMTPPAASVVPLAD--IALP 540
           E Y P  PM+PP+  VV LAD   ALP
Sbjct: 46  EVYDPYGPMSPPSQKVVDLADRIAALP 72


>08_02_1457 + 27260841-27260965,27261126-27261246,27263455-27263543,
            27263776-27263860,27263970-27264074,27264446-27264527,
            27264573-27264686,27265029-27265330,27265519-27266114,
            27266216-27266376,27266489-27266592,27266697-27266856,
            27266942-27267105,27267213-27267545,27267640-27267930,
            27268276-27268359,27268430-27268563,27268665-27268892,
            27268993-27269164,27269263-27269517,27269778-27270047
          Length = 1324

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 10/33 (30%), Positives = 13/33 (39%)
 Frame = +3

Query: 519  KYFMQV*RQCYVC*WNDRCGRWSHWSRRRISFI 617
            KY+     QC  C W   C  W +     + FI
Sbjct: 1041 KYWQDFRAQCMACLWKQNCAYWKNSEHNVVRFI 1073


>12_02_1215 + 27070164-27070302,27070308-27071098
          Length = 309

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +3

Query: 573 CGRWSHWSRRRISFI 617
           CG WS W RRR  F+
Sbjct: 156 CGGWSRWQRRRRPFV 170


>05_04_0209 -
           19073147-19074041,19074117-19074163,19074258-19074437,
           19074839-19074955,19075105-19075227,19075391-19075776,
           19076177-19076303,19077140-19077202,19078035-19078086,
           19078189-19080023
          Length = 1274

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
 Frame = -2

Query: 638 ASSSPGEDEAYSPSRPMTP-----PAASVVPLADIA 546
           ASSSP    +  P  PM P     PA  +VP++D+A
Sbjct: 191 ASSSPAGVASNDPKEPMLPESYFQPADLIVPISDVA 226


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,266,316
Number of Sequences: 37544
Number of extensions: 288002
Number of successful extensions: 882
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 882
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1667659452
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)