Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_pT_M03
         (663 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   1.1  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   4.5  
AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    22   6.0  
AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding prote...    22   6.0  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   6.0  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   7.9  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
 Frame = -2

Query: 626 PGEDEAYSPSRPMTPPAASV-VPLADIALPSNLHEILATIKQRSETT-TGDVDMRTLPLK 453
           PG  E    SRP+ PPA+S  +P       +      AT    + TT TG +   TL   
Sbjct: 83  PGNLEQIG-SRPLHPPASSTSLPATITTTTTTTTTTTATAAATATTTATGLIKQETLQRH 141

Query: 452 *HMK 441
            H++
Sbjct: 142 HHLQ 145


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
 Frame = -2

Query: 629 SPGEDEAYSPSRPMTPPAASVVPLADIALPSNLHEILATIKQRSETTTGDVDMRTL-PLK 453
           +P +        P+ PPA  +     I   S+  +   T  +   ++T D+D + L P+K
Sbjct: 198 TPAKKRIKLEQSPLCPPAPRLTNSNSIKHESDNSDYSHTTDENRHSSTLDIDHKMLTPIK 257


>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding protein
           ASP6 protein.
          Length = 146

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +2

Query: 554 LLVERQMRQVESLVETANK 610
           +L+E  + +VES+VET  K
Sbjct: 99  ILLEEYIPRVESVVETCKK 117


>AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding protein
           protein.
          Length = 120

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +2

Query: 554 LLVERQMRQVESLVETANK 610
           +L+E  + +VES+VET  K
Sbjct: 73  ILLEEYIPRVESVVETCKK 91


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +1

Query: 334 NVNKYKNYY 360
           N NKYK+YY
Sbjct: 141 NTNKYKDYY 149


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = -2

Query: 581 PAASVVPLADIALPSNLHEILATIKQRSETTTGDV 477
           PAAS    +D+ L   +   L ++     T +G+V
Sbjct: 470 PAASWGSASDVTLDEAVKSPLGSVSSTESTCSGEV 504


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,468
Number of Sequences: 438
Number of extensions: 3770
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19977660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)