Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_pT_L23
         (679 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U56964-7|AAB54034.1|  382|Caenorhabditis elegans Hypothetical pr...    30   1.7  
Z81526-2|CAB04265.1|  229|Caenorhabditis elegans Hypothetical pr...    28   5.3  
AC024136-1|AAF35961.1|  755|Caenorhabditis elegans Hypothetical ...    28   5.3  
Z22180-5|CAA80174.2|  717|Caenorhabditis elegans Hypothetical pr...    27   9.3  

>U56964-7|AAB54034.1|  382|Caenorhabditis elegans Hypothetical
           protein F52E4.8 protein.
          Length = 382

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 14/51 (27%), Positives = 27/51 (52%)
 Frame = -2

Query: 369 KVLQGRLIEQTQLRACISNARHLPLRCSRQISFLCCPTCWNNHI*RFTLRY 217
           ++LQ R + + + +  +   +  P   SRQ + L C TC  N + +F+L +
Sbjct: 48  QILQKRRLNENRPQTELKEQKTEPKTRSRQFAMLRCGTCSENFVSQFSLEH 98


>Z81526-2|CAB04265.1|  229|Caenorhabditis elegans Hypothetical
           protein F33H2.3 protein.
          Length = 229

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 28/79 (35%), Positives = 38/79 (48%), Gaps = 12/79 (15%)
 Frame = -3

Query: 521 IATLKGNPT-PLL-------NVTGDNGSLVGLLTADNVRKKLSNMLAKTSDPLDKF---- 378
           + TL G PT P L       N  GDN S   L+      KK++  LA     LD      
Sbjct: 53  LTTLAGFPTLPALTYLDISDNQLGDNASFDVLVKNAPDLKKIT--LASNKLSLDNLRCLK 110

Query: 377 LVKKYYKVDLSNKPSLGLV 321
           ++   +++DLSN PSLGL+
Sbjct: 111 VLPNLFELDLSNNPSLGLL 129


>AC024136-1|AAF35961.1|  755|Caenorhabditis elegans Hypothetical
           protein F54A3.4 protein.
          Length = 755

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = -3

Query: 677 YMTXFISDQWMEARNFKPL-IXNDK 606
           Y+T F+ D WM+AR F    I ND+
Sbjct: 646 YLTKFLDDDWMKARGFFGFCIKNDR 670


>Z22180-5|CAA80174.2|  717|Caenorhabditis elegans Hypothetical
           protein K11H3.4 protein.
          Length = 717

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 151 WCSLKMNCFFFQCKHKNGIVLKMK 80
           +C++K   FF  C+H   I L+MK
Sbjct: 258 FCNIKFISFFEMCRHVGSIQLRMK 281


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,912,530
Number of Sequences: 27780
Number of extensions: 311454
Number of successful extensions: 717
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 717
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)