Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_pT_L17
(379 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z47727-1|CAA87656.1| 58|Homo sapiens RNA polymerase II protein. 101 6e-22
CR456870-1|CAG33151.1| 58|Homo sapiens POLR2K protein. 101 6e-22
BC018157-1|AAH18157.1| 58|Homo sapiens polymerase (RNA) II (DN... 101 6e-22
BC000806-1|AAH00806.1| 58|Homo sapiens polymerase (RNA) II (DN... 101 6e-22
AJ252078-1|CAB91873.1| 58|Homo sapiens RPB10alpha protein. 101 6e-22
AL158196-5|CAI17021.1| 58|Homo sapiens protein ( Human DNA seq... 77 2e-14
BC126347-1|AAI26348.1| 696|Homo sapiens interleukin 1 receptor ... 28 8.8
BC126345-1|AAI26346.1| 696|Homo sapiens interleukin 1 receptor ... 28 8.8
BC032857-1|AAH32857.1| 363|Homo sapiens ZNF439 protein protein. 28 8.8
AL031575-2|CAI42035.1| 696|Homo sapiens interleukin 1 receptor ... 28 8.8
AL031466-1|CAI42992.1| 696|Homo sapiens interleukin 1 receptor ... 28 8.8
AK027542-1|BAB55187.1| 363|Homo sapiens protein ( Homo sapiens ... 28 8.8
AJ243874-1|CAB56046.1| 696|Homo sapiens oligophrenin-4 protein. 28 8.8
AF533682-1|AAQ10304.1| 133|Homo sapiens IL1RAPL1-dystrophin fus... 28 8.8
AF284435-1|AAG21369.1| 696|Homo sapiens TIGIRR-2 protein. 28 8.8
AF181284-1|AAF59411.1| 696|Homo sapiens X-linked interleukin-1 ... 28 8.8
AB102650-1|BAC81119.1| 696|Homo sapiens interleukin 1 receptor ... 28 8.8
>Z47727-1|CAA87656.1| 58|Homo sapiens RNA polymerase II protein.
Length = 58
Score = 101 bits (243), Expect = 6e-22
Identities = 45/57 (78%), Positives = 47/57 (82%)
Frame = -1
Query: 232 DTTGKEQSVTKVPMIYVCGECHKENEIKPRDPIRCRECGYRIMYKKRTKRLVVFDAR 62
DT Q + PMIY+CGECH ENEIK RDPIRCRECGYRIMYKKRTKRLVVFDAR
Sbjct: 2 DTQKDVQPPKQQPMIYICGECHTENEIKSRDPIRCRECGYRIMYKKRTKRLVVFDAR 58
>CR456870-1|CAG33151.1| 58|Homo sapiens POLR2K protein.
Length = 58
Score = 101 bits (243), Expect = 6e-22
Identities = 45/57 (78%), Positives = 47/57 (82%)
Frame = -1
Query: 232 DTTGKEQSVTKVPMIYVCGECHKENEIKPRDPIRCRECGYRIMYKKRTKRLVVFDAR 62
DT Q + PMIY+CGECH ENEIK RDPIRCRECGYRIMYKKRTKRLVVFDAR
Sbjct: 2 DTQKDVQPPKQQPMIYICGECHTENEIKSRDPIRCRECGYRIMYKKRTKRLVVFDAR 58
>BC018157-1|AAH18157.1| 58|Homo sapiens polymerase (RNA) II (DNA
directed) polypeptide K, 7.0kDa protein.
Length = 58
Score = 101 bits (243), Expect = 6e-22
Identities = 45/57 (78%), Positives = 47/57 (82%)
Frame = -1
Query: 232 DTTGKEQSVTKVPMIYVCGECHKENEIKPRDPIRCRECGYRIMYKKRTKRLVVFDAR 62
DT Q + PMIY+CGECH ENEIK RDPIRCRECGYRIMYKKRTKRLVVFDAR
Sbjct: 2 DTQKDVQPPKQQPMIYICGECHTENEIKSRDPIRCRECGYRIMYKKRTKRLVVFDAR 58
>BC000806-1|AAH00806.1| 58|Homo sapiens polymerase (RNA) II (DNA
directed) polypeptide K, 7.0kDa protein.
Length = 58
Score = 101 bits (243), Expect = 6e-22
Identities = 45/57 (78%), Positives = 47/57 (82%)
Frame = -1
Query: 232 DTTGKEQSVTKVPMIYVCGECHKENEIKPRDPIRCRECGYRIMYKKRTKRLVVFDAR 62
DT Q + PMIY+CGECH ENEIK RDPIRCRECGYRIMYKKRTKRLVVFDAR
Sbjct: 2 DTQKDVQPPKQQPMIYICGECHTENEIKSRDPIRCRECGYRIMYKKRTKRLVVFDAR 58
>AJ252078-1|CAB91873.1| 58|Homo sapiens RPB10alpha protein.
Length = 58
Score = 101 bits (243), Expect = 6e-22
Identities = 45/57 (78%), Positives = 47/57 (82%)
Frame = -1
Query: 232 DTTGKEQSVTKVPMIYVCGECHKENEIKPRDPIRCRECGYRIMYKKRTKRLVVFDAR 62
DT Q + PMIY+CGECH ENEIK RDPIRCRECGYRIMYKKRTKRLVVFDAR
Sbjct: 2 DTQKDVQPPKQQPMIYICGECHTENEIKSRDPIRCRECGYRIMYKKRTKRLVVFDAR 58
>AL158196-5|CAI17021.1| 58|Homo sapiens protein ( Human DNA
sequence from clone RP11-90M2 on chromosome 13 Contains
gene FLJ10956, the gene for HSPC126 protein (DRIP36), a
novel gene ).
Length = 58
Score = 77.0 bits (181), Expect = 2e-14
Identities = 33/57 (57%), Positives = 42/57 (73%)
Frame = -1
Query: 232 DTTGKEQSVTKVPMIYVCGECHKENEIKPRDPIRCRECGYRIMYKKRTKRLVVFDAR 62
DT Q+ + PM Y C ECH EN++K RDP++C ECGYRI+YKKRT+ LV FDA+
Sbjct: 2 DTQKDIQTPKQQPMAYNCRECHTENDMKSRDPVKCGECGYRIIYKKRTEILVGFDAQ 58
>BC126347-1|AAI26348.1| 696|Homo sapiens interleukin 1 receptor
accessory protein-like 1 protein.
Length = 696
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Frame = -1
Query: 130 CRECGYR--IMYKKRTKRLVVFDAR*TNSGNKTLEDKFGGYIMHR 2
CR +R I++K+ T L++ + R + GN T E K+GG+++ R
Sbjct: 185 CRTKTWRPSIVFKRDT--LLIREVREDDIGNYTCELKYGGFVVRR 227
>BC126345-1|AAI26346.1| 696|Homo sapiens interleukin 1 receptor
accessory protein-like 1 protein.
Length = 696
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Frame = -1
Query: 130 CRECGYR--IMYKKRTKRLVVFDAR*TNSGNKTLEDKFGGYIMHR 2
CR +R I++K+ T L++ + R + GN T E K+GG+++ R
Sbjct: 185 CRTKTWRPSIVFKRDT--LLIREVREDDIGNYTCELKYGGFVVRR 227
>BC032857-1|AAH32857.1| 363|Homo sapiens ZNF439 protein protein.
Length = 363
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = -1
Query: 166 KENEIKPRDPIRCRECGYRIMYKKRTKRLVVFDAR*TNSGNKTLEDKFGGYIMH 5
+E + + P C+ECG I+Y +R +V +SG+ + KF G H
Sbjct: 40 QERDHTGKKPYACKECGKNIIYHSSIQRHMV-----VHSGDGPYKCKFCGKAFH 88
>AL031575-2|CAI42035.1| 696|Homo sapiens interleukin 1 receptor
accessory protein-like 1 protein.
Length = 696
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Frame = -1
Query: 130 CRECGYR--IMYKKRTKRLVVFDAR*TNSGNKTLEDKFGGYIMHR 2
CR +R I++K+ T L++ + R + GN T E K+GG+++ R
Sbjct: 185 CRTKTWRPSIVFKRDT--LLIREVREDDIGNYTCELKYGGFVVRR 227
>AL031466-1|CAI42992.1| 696|Homo sapiens interleukin 1 receptor
accessory protein-like 1 protein.
Length = 696
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Frame = -1
Query: 130 CRECGYR--IMYKKRTKRLVVFDAR*TNSGNKTLEDKFGGYIMHR 2
CR +R I++K+ T L++ + R + GN T E K+GG+++ R
Sbjct: 185 CRTKTWRPSIVFKRDT--LLIREVREDDIGNYTCELKYGGFVVRR 227
>AK027542-1|BAB55187.1| 363|Homo sapiens protein ( Homo sapiens
cDNA FLJ14636 fis, clone NT2RP2001233, weakly similar to
ZINC FINGER PROTEIN 91. ).
Length = 363
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = -1
Query: 166 KENEIKPRDPIRCRECGYRIMYKKRTKRLVVFDAR*TNSGNKTLEDKFGGYIMH 5
+E + + P C+ECG I+Y +R +V +SG+ + KF G H
Sbjct: 40 QERDHTGKKPYACKECGKNIIYHSSIQRHMV-----VHSGDGPYKCKFCGKAFH 88
>AJ243874-1|CAB56046.1| 696|Homo sapiens oligophrenin-4 protein.
Length = 696
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Frame = -1
Query: 130 CRECGYR--IMYKKRTKRLVVFDAR*TNSGNKTLEDKFGGYIMHR 2
CR +R I++K+ T L++ + R + GN T E K+GG+++ R
Sbjct: 185 CRTKTWRPSIVFKRDT--LLIREVREDDIGNYTCELKYGGFVVRR 227
>AF533682-1|AAQ10304.1| 133|Homo sapiens IL1RAPL1-dystrophin fusion
protein protein.
Length = 133
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Frame = -1
Query: 130 CRECGYR--IMYKKRTKRLVVFDAR*TNSGNKTLEDKFGGYIMHR 2
CR +R I++K+ T L++ + R + GN T E K+GG+++ R
Sbjct: 17 CRTKTWRPSIVFKRDT--LLIREVREDDIGNYTCELKYGGFVVRR 59
>AF284435-1|AAG21369.1| 696|Homo sapiens TIGIRR-2 protein.
Length = 696
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Frame = -1
Query: 130 CRECGYR--IMYKKRTKRLVVFDAR*TNSGNKTLEDKFGGYIMHR 2
CR +R I++K+ T L++ + R + GN T E K+GG+++ R
Sbjct: 185 CRTKTWRPSIVFKRDT--LLIREVREDDIGNYTCELKYGGFVVRR 227
>AF181284-1|AAF59411.1| 696|Homo sapiens X-linked interleukin-1
receptor accessory protein-like 1 protein.
Length = 696
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Frame = -1
Query: 130 CRECGYR--IMYKKRTKRLVVFDAR*TNSGNKTLEDKFGGYIMHR 2
CR +R I++K+ T L++ + R + GN T E K+GG+++ R
Sbjct: 185 CRTKTWRPSIVFKRDT--LLIREVREDDIGNYTCELKYGGFVVRR 227
>AB102650-1|BAC81119.1| 696|Homo sapiens interleukin 1 receptor
accessory protein-like 1 protein.
Length = 696
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Frame = -1
Query: 130 CRECGYR--IMYKKRTKRLVVFDAR*TNSGNKTLEDKFGGYIMHR 2
CR +R I++K+ T L++ + R + GN T E K+GG+++ R
Sbjct: 185 CRTKTWRPSIVFKRDT--LLIREVREDDIGNYTCELKYGGFVVRR 227
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,073,447
Number of Sequences: 237096
Number of extensions: 898928
Number of successful extensions: 1799
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1793
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2536788584
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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