Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_pT_L17
         (379 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82266-7|CAB51465.1|   62|Caenorhabditis elegans Hypothetical pr...    87   3e-18
Z77663-14|CAB01214.2|  568|Caenorhabditis elegans Hypothetical p...    29   0.83 
AJ581300-1|CAE46113.1|  568|Caenorhabditis elegans flavin monoox...    29   0.83 
AF106589-2|AAC78230.1|  107|Caenorhabditis elegans Hypothetical ...    29   1.5  
Z77662-5|CAB01192.2|  579|Caenorhabditis elegans Hypothetical pr...    28   1.9  
Z81016-4|CAB02662.2| 1885|Caenorhabditis elegans Hypothetical pr...    28   2.5  
Z98851-3|CAB11538.2|  659|Caenorhabditis elegans Hypothetical pr...    26   7.8  

>Z82266-7|CAB51465.1|   62|Caenorhabditis elegans Hypothetical
           protein F23B2.13 protein.
          Length = 62

 Score = 87.4 bits (207), Expect = 3e-18
 Identities = 34/44 (77%), Positives = 41/44 (93%)
 Frame = -1

Query: 193 MIYVCGECHKENEIKPRDPIRCRECGYRIMYKKRTKRLVVFDAR 62
           MIY+CGECH ENEIKP+D IRCRECGYRI+YKKR ++L+V+DAR
Sbjct: 19  MIYICGECHAENEIKPKDAIRCRECGYRILYKKRCRKLMVYDAR 62


>Z77663-14|CAB01214.2|  568|Caenorhabditis elegans Hypothetical
           protein F53F4.5 protein.
          Length = 568

 Score = 29.5 bits (63), Expect = 0.83
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +2

Query: 86  FCSFLVHYSVTTFSAPNRISWFDFILFVTFSTNIYHW 196
           FCS L+ Y  TT + P  + +F F LF T       W
Sbjct: 521 FCSGLLLYCSTTSTLPPAVYFFSFFLFFTLYGATLMW 557


>AJ581300-1|CAE46113.1|  568|Caenorhabditis elegans flavin
           monooxygenase protein.
          Length = 568

 Score = 29.5 bits (63), Expect = 0.83
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +2

Query: 86  FCSFLVHYSVTTFSAPNRISWFDFILFVTFSTNIYHW 196
           FCS L+ Y  TT + P  + +F F LF T       W
Sbjct: 521 FCSGLLLYCSTTSTLPPAVYFFSFFLFFTLYGATLMW 557


>AF106589-2|AAC78230.1|  107|Caenorhabditis elegans Hypothetical
           protein Y44E3A.3 protein.
          Length = 107

 Score = 28.7 bits (61), Expect = 1.5
 Identities = 9/20 (45%), Positives = 16/20 (80%)
 Frame = +1

Query: 46  FQNLFTERQTQPIFLFFSCT 105
           F+ +F E++TQP+ LFF+ +
Sbjct: 11  FKTIFAEKKTQPVILFFTAS 30


>Z77662-5|CAB01192.2|  579|Caenorhabditis elegans Hypothetical
           protein F47B8.5 protein.
          Length = 579

 Score = 28.3 bits (60), Expect = 1.9
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +2

Query: 122 FSAPNRISWFDFILFVTFSTNIYHWH 199
           F A    S F F  F+TFST+ +H+H
Sbjct: 310 FEAICLFSLFSFFNFITFSTSHFHFH 335


>Z81016-4|CAB02662.2| 1885|Caenorhabditis elegans Hypothetical
           protein F21G4.6 protein.
          Length = 1885

 Score = 27.9 bits (59), Expect = 2.5
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +3

Query: 15  YPPNLSSRVLFPEFVYRASNTTNLFVLFLY 104
           YPP+L  RV FP  V+R S+  N F   +Y
Sbjct: 488 YPPSLPLRVDFPH-VHRTSSKANRFKQIVY 516


>Z98851-3|CAB11538.2|  659|Caenorhabditis elegans Hypothetical
           protein H12I19.4 protein.
          Length = 659

 Score = 26.2 bits (55), Expect = 7.8
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +2

Query: 83  SFCSFLVHYSVTTFSAPNRISWFDFILFVTFSTNIYHWHF 202
           S+  +LVH+ V TF     ++   F + +TF   I   HF
Sbjct: 296 SYVLYLVHWPVITFFKSTTVTSNIFCIVLTFIITIIVHHF 335


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,267,066
Number of Sequences: 27780
Number of extensions: 151775
Number of successful extensions: 361
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 360
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 557037416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)