Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_pT_L16
         (595 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41105-4|AAA82397.2|  407|Caenorhabditis elegans 3-ketoacyl-coa ...   172   1e-43
U41105-8|AAA82403.1|  460|Caenorhabditis elegans Hypothetical pr...   152   2e-37
U41105-5|AAA82398.1|  390|Caenorhabditis elegans Hypothetical pr...   139   2e-33
Z81546-11|CAB04455.2|  394|Caenorhabditis elegans Hypothetical p...   118   2e-27
M77697-2|AAA27897.2|  448|Caenorhabditis elegans Hypothetical pr...    74   9e-14
D86473-1|BAA20377.1|  412|Caenorhabditis elegans 3-keto-acyl-CoA...    33   0.20 
AL023847-7|CAA19548.1|  412|Caenorhabditis elegans Hypothetical ...    33   0.20 
Z82269-7|CAB05204.2|  786|Caenorhabditis elegans Hypothetical pr...    30   1.1  
Z82269-6|CAB05206.3|  809|Caenorhabditis elegans Hypothetical pr...    30   1.1  
DQ143943-1|AAZ73241.1|  770|Caenorhabditis elegans RNA-decapping...    30   1.1  
AL021488-8|CAJ43919.1|  786|Caenorhabditis elegans Hypothetical ...    30   1.1  
AL021488-7|CAJ43918.1|  809|Caenorhabditis elegans Hypothetical ...    30   1.1  
AC006683-1|AAK71395.4|  954|Caenorhabditis elegans Adenylyl cycl...    30   1.4  
Z71180-3|CAA94892.2|  763|Caenorhabditis elegans Hypothetical pr...    28   4.4  
AL021474-7|CAA16311.2|  763|Caenorhabditis elegans Hypothetical ...    28   4.4  
AL021386-3|CAA16167.1|  330|Caenorhabditis elegans Hypothetical ...    28   4.4  
Z74028-4|CAC70073.1|  143|Caenorhabditis elegans Hypothetical pr...    27   7.6  

>U41105-4|AAA82397.2|  407|Caenorhabditis elegans 3-ketoacyl-coa
           thiolase protein 1 protein.
          Length = 407

 Score =  172 bits (419), Expect = 1e-43
 Identities = 76/143 (53%), Positives = 102/143 (71%)
 Frame = -1

Query: 595 TLNDGXXXXXXXXXXXAKRLNVKPIARIVGFADGECDPIDFPIAPAVAIPKLLEKTGVRK 416
           TLNDG               ++KP+ARI+ + D    P+DF +AP +  PK+LE+ GV++
Sbjct: 265 TLNDGAAAVIVASQEAVSEQSLKPLARILAYGDAATHPLDFAVAPTLMFPKILERAGVKQ 324

Query: 415 EDVALWEINEAFSVVAVANQKLLGLDPSKINVHGGAVSLGHPIGMSGARIVVHLCHALKK 236
            DVA WE+NEAFS V +A  K LG+DPS +N HGGAVS+GHPIGMSGAR++ HL H LK 
Sbjct: 325 SDVAQWEVNEAFSCVPLAFIKKLGVDPSLVNPHGGAVSIGHPIGMSGARLITHLVHTLKS 384

Query: 235 GEKGVASICNGGGGASSVMIEKM 167
           G+ GVA+ICNGGGG+S ++I+K+
Sbjct: 385 GQIGVAAICNGGGGSSGMVIQKL 407


>U41105-8|AAA82403.1|  460|Caenorhabditis elegans Hypothetical
           protein T02G5.4 protein.
          Length = 460

 Score =  152 bits (369), Expect = 2e-37
 Identities = 65/123 (52%), Positives = 91/123 (73%)
 Frame = -1

Query: 535 NVKPIARIVGFADGECDPIDFPIAPAVAIPKLLEKTGVRKEDVALWEINEAFSVVAVANQ 356
           N+KP+ARI+ + D     +DF +AP +  P LL+  GV + DVA WE+NEAFS V +A  
Sbjct: 338 NLKPLARILAYGDAATHQLDFAVAPTLLFPNLLQSAGVEQSDVAQWEVNEAFSCVPLAFI 397

Query: 355 KLLGLDPSKINVHGGAVSLGHPIGMSGARIVVHLCHALKKGEKGVASICNGGGGASSVMI 176
           K LG+DPS +N HGGAVS+GHPIGMSGA ++ HL H L+ G+ GVA++C+G GG+S ++I
Sbjct: 398 KKLGVDPSLVNPHGGAVSIGHPIGMSGASLITHLVHTLESGQIGVAALCDGDGGSSGMVI 457

Query: 175 EKM 167
           +K+
Sbjct: 458 QKL 460


>U41105-5|AAA82398.1|  390|Caenorhabditis elegans Hypothetical
           protein T02G5.7 protein.
          Length = 390

 Score =  139 bits (336), Expect = 2e-33
 Identities = 63/120 (52%), Positives = 91/120 (75%)
 Frame = -1

Query: 526 PIARIVGFADGECDPIDFPIAPAVAIPKLLEKTGVRKEDVALWEINEAFSVVAVANQKLL 347
           P+A +V FA+    PIDF +AP  A+  LL+K+G++  D+ALWE+NEAF+V  +A  K L
Sbjct: 271 PLAELVAFAEAGRAPIDFTVAPVDAVRLLLKKSGLQVSDIALWELNEAFAVTVLAFIKEL 330

Query: 346 GLDPSKINVHGGAVSLGHPIGMSGARIVVHLCHALKKGEKGVASICNGGGGASSVMIEKM 167
            ++PS +NV GGAV++GHP+GMSG RIV  L ++L  G+ GVA+ICNGGG A++V+I+K+
Sbjct: 331 NIEPSVVNVKGGAVAIGHPLGMSGLRIVNSLAYSLAPGQLGVAAICNGGGEATAVLIKKL 390


>Z81546-11|CAB04455.2|  394|Caenorhabditis elegans Hypothetical
           protein F53A2.7 protein.
          Length = 394

 Score =  118 bits (285), Expect = 2e-27
 Identities = 57/144 (39%), Positives = 91/144 (63%), Gaps = 2/144 (1%)
 Frame = -1

Query: 592 LNDGXXXXXXXXXXXAKRLNVKPIARIVGFADGECDPIDFPIAPAVAIPKLLEKTGVRKE 413
           ++DG            K  N+KP+AR+V ++   CDP    I PA AI ++L+K+G++  
Sbjct: 251 ISDGAAALVVAGEDSVKSKNLKPLARVVAYSAVGCDPTIMGIGPAPAIREVLKKSGLKIG 310

Query: 412 DVALWEINEAFSVVAVANQKLLGLDPSKINVHGGAVSLGHPIGMSGARIVVHLCHAL--K 239
           D+ ++E+NEAF+  A+A Q+ LG+   K+NV+GGA++LGHP+  SGARI  H+ H L  +
Sbjct: 311 DIDIFEVNEAFAPQALAVQRELGIPMEKLNVNGGAIALGHPLAASGARISTHIVHELHRR 370

Query: 238 KGEKGVASICNGGGGASSVMIEKM 167
             + G+ S C GGG   +++ EK+
Sbjct: 371 NVKYGIGSACIGGGQGIAILFEKV 394


>M77697-2|AAA27897.2|  448|Caenorhabditis elegans Hypothetical
           protein B0303.3 protein.
          Length = 448

 Score = 73.7 bits (173), Expect = 9e-14
 Identities = 48/139 (34%), Positives = 72/139 (51%), Gaps = 20/139 (14%)
 Frame = -1

Query: 529 KPIARIVGFADGECDPID-FPIAPAVAIPKLLEKTGVRKEDVALWEINEAFSVVAVANQK 353
           KP A +  +     DP D   ++PA  IPKLL+K G+  +DV ++EI+EAF+   +AN  
Sbjct: 306 KPKAYLRDYLYVAQDPKDQLLLSPAYVIPKLLDKAGLTLKDVDVFEIHEAFAGQVLANLN 365

Query: 352 LLGLD-----------------PSKINVHGGAVSLGHPIGMSGARIVVHLCHALK--KGE 230
            +  D                   K+N+ GG++S+GHP G +G R+  H  H LK  KG+
Sbjct: 366 AMDSDYFCKEQMKRSGKFGRVPMDKLNLWGGSLSIGHPFGATGVRLATHSAHRLKEEKGQ 425

Query: 229 KGVASICNGGGGASSVMIE 173
             V + C  GG    ++IE
Sbjct: 426 YAVIAACAAGGHGVGMLIE 444


>D86473-1|BAA20377.1|  412|Caenorhabditis elegans 3-keto-acyl-CoA
           thiolase protein.
          Length = 412

 Score = 32.7 bits (71), Expect = 0.20
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = -1

Query: 328 INVHGGAVSLGHPIGMSGARIVVHLCHALKKGEKGVASICN 206
           IN  GG +S GHPIG +G    V L + L +G+ G   + N
Sbjct: 341 INPSGGLISKGHPIGATGVAQAVELSNQL-RGKCGKRQVPN 380


>AL023847-7|CAA19548.1|  412|Caenorhabditis elegans Hypothetical
           protein Y57A10C.6 protein.
          Length = 412

 Score = 32.7 bits (71), Expect = 0.20
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = -1

Query: 328 INVHGGAVSLGHPIGMSGARIVVHLCHALKKGEKGVASICN 206
           IN  GG +S GHPIG +G    V L + L +G+ G   + N
Sbjct: 341 INPSGGLISKGHPIGATGVAQAVELSNQL-RGKCGKRQVPN 380


>Z82269-7|CAB05204.2|  786|Caenorhabditis elegans Hypothetical
           protein F52G2.1b protein.
          Length = 786

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +3

Query: 159 STYIFSIITDDAPPPPLQIEATPFSPFFK 245
           S+ IFS +    PPPP+  +ATP  P +K
Sbjct: 400 SSSIFSQLFPAQPPPPVPEDATPTRPMYK 428


>Z82269-6|CAB05206.3|  809|Caenorhabditis elegans Hypothetical
           protein F52G2.1a protein.
          Length = 809

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +3

Query: 159 STYIFSIITDDAPPPPLQIEATPFSPFFK 245
           S+ IFS +    PPPP+  +ATP  P +K
Sbjct: 423 SSSIFSQLFPAQPPPPVPEDATPTRPMYK 451


>DQ143943-1|AAZ73241.1|  770|Caenorhabditis elegans RNA-decapping
           protein protein.
          Length = 770

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +3

Query: 159 STYIFSIITDDAPPPPLQIEATPFSPFFK 245
           S+ IFS +    PPPP+  +ATP  P +K
Sbjct: 384 SSSIFSQLFPAQPPPPVPEDATPTRPMYK 412


>AL021488-8|CAJ43919.1|  786|Caenorhabditis elegans Hypothetical
           protein F52G2.1b protein.
          Length = 786

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +3

Query: 159 STYIFSIITDDAPPPPLQIEATPFSPFFK 245
           S+ IFS +    PPPP+  +ATP  P +K
Sbjct: 400 SSSIFSQLFPAQPPPPVPEDATPTRPMYK 428


>AL021488-7|CAJ43918.1|  809|Caenorhabditis elegans Hypothetical
           protein F52G2.1a protein.
          Length = 809

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +3

Query: 159 STYIFSIITDDAPPPPLQIEATPFSPFFK 245
           S+ IFS +    PPPP+  +ATP  P +K
Sbjct: 423 SSSIFSQLFPAQPPPPVPEDATPTRPMYK 451


>AC006683-1|AAK71395.4|  954|Caenorhabditis elegans Adenylyl cyclase
           protein 4 protein.
          Length = 954

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 18/61 (29%), Positives = 29/61 (47%)
 Frame = -1

Query: 352 LLGLDPSKINVHGGAVSLGHPIGMSGARIVVHLCHALKKGEKGVASICNGGGGASSVMIE 173
           +LGL   + +V    V+L + +   G    VH+  A +   KG   +  G GG+ S  +E
Sbjct: 348 VLGLKKWQFDVWSNDVTLANQMESGGLAGRVHITDATRSYLKGAYILEEGNGGSRSKFLE 407

Query: 172 K 170
           K
Sbjct: 408 K 408


>Z71180-3|CAA94892.2|  763|Caenorhabditis elegans Hypothetical
           protein F22E12.1 protein.
          Length = 763

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 323 CTWWSCQFGSSNWYVWSSHC 264
           C+WWS   G+SN Y   +HC
Sbjct: 114 CSWWSGCGGNSNIYYSYNHC 133


>AL021474-7|CAA16311.2|  763|Caenorhabditis elegans Hypothetical
           protein F22E12.1 protein.
          Length = 763

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 323 CTWWSCQFGSSNWYVWSSHC 264
           C+WWS   G+SN Y   +HC
Sbjct: 114 CSWWSGCGGNSNIYYSYNHC 133


>AL021386-3|CAA16167.1|  330|Caenorhabditis elegans Hypothetical
           protein F57E7.3 protein.
          Length = 330

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 323 CTWWSCQFGSSNWYVWSSHCCTSV 252
           CTW    F S+ WY+ +SH  + +
Sbjct: 2   CTWRGSYFESAEWYLLASHLLSCI 25


>Z74028-4|CAC70073.1|  143|Caenorhabditis elegans Hypothetical
           protein C14C10.7 protein.
          Length = 143

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +3

Query: 216 EATPFSPFFKAWHRCTTMRAP 278
           E TP  P FK +H C   R P
Sbjct: 78  ETTPIDPVFKIYHDCNDERLP 98


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,952,187
Number of Sequences: 27780
Number of extensions: 275439
Number of successful extensions: 828
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 826
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)