Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_pT_L15
         (603 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC1703.07 |||ATP citrate synthase subunit 1 |Schizosaccharomyc...    25   6.4  
SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomy...    25   6.4  
SPCC31H12.06 |mug111||sequence orphan|Schizosaccharomyces pombe|...    25   6.4  
SPAC15A10.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1|...    25   8.5  
SPAC1834.09 |mug51||conserved fungal protein|Schizosaccharomyces...    25   8.5  

>SPBC1703.07 |||ATP citrate synthase subunit 1 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 615

 Score = 25.4 bits (53), Expect = 6.4
 Identities = 8/24 (33%), Positives = 19/24 (79%)
 Frame = -1

Query: 387 ISGAINRSSYDLFSENVVLFVFSI 316
           ++G++++ SY+LFS++   FV+ +
Sbjct: 1   MAGSVDKPSYELFSKDTRAFVYGM 24


>SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 613

 Score = 25.4 bits (53), Expect = 6.4
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +2

Query: 89  LLTNNLIFSWKRNQTYFLRC 148
           LLTN LI S   N TYF +C
Sbjct: 539 LLTNGLISSTVDNDTYFGQC 558


>SPCC31H12.06 |mug111||sequence orphan|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 468

 Score = 25.4 bits (53), Expect = 6.4
 Identities = 9/21 (42%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
 Frame = +1

Query: 196 EFCSFFFLITPSC-CVFKAVS 255
           ++CSF+F I P C C+  ++S
Sbjct: 440 KYCSFYFFIGPICICLLGSIS 460


>SPAC15A10.07 |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 190

 Score = 25.0 bits (52), Expect = 8.5
 Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
 Frame = +1

Query: 193 PEFCSFFFL-ITPSCCVFKAVSCPQLRKIVLLFANEISGRVD 315
           P   +FF   I     VF+ V  P+L+ I   F + IS   D
Sbjct: 16  PTTTNFFLTNILSMSVVFRTVEDPELKSICTTFTSSISAEFD 57


>SPAC1834.09 |mug51||conserved fungal protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 306

 Score = 25.0 bits (52), Expect = 8.5
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +2

Query: 389 PXYTKFYENHWSSFRDSDYIYTRIARL 469
           P + K +  +   F+D ++IYT I +L
Sbjct: 147 PEFDKLFTYYLCKFKDQEHIYTLIFKL 173


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,233,112
Number of Sequences: 5004
Number of extensions: 43099
Number of successful extensions: 80
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 80
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 264253462
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)