Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_pT_L14
(866 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28928-10|AAN63432.2| 388|Caenorhabditis elegans Hypothetical p... 138 4e-33
U61947-4|AAO44914.1| 349|Caenorhabditis elegans Hypothetical pr... 53 3e-07
U61947-3|AAB03130.2| 391|Caenorhabditis elegans Hypothetical pr... 53 3e-07
Z66523-7|CAA91416.2| 409|Caenorhabditis elegans Hypothetical pr... 29 5.7
U97189-9|AAC48161.1| 263|Caenorhabditis elegans Hypothetical pr... 29 5.7
U10438-10|AAA19088.2| 345|Caenorhabditis elegans Hypothetical p... 28 7.5
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ... 28 9.9
>U28928-10|AAN63432.2| 388|Caenorhabditis elegans Hypothetical
protein C44B7.12 protein.
Length = 388
Score = 138 bits (335), Expect = 4e-33
Identities = 85/274 (31%), Positives = 141/274 (51%), Gaps = 4/274 (1%)
Frame = -2
Query: 862 FXVFNIAHSLTSTSEALVMXTELTLQEFQEDGCCYIELRSTPRDTQYXTKKQYIDSIIRA 683
F F + H++ EA+ + T++EF+ED C Y+ELR++P++T + T + Y+ I +
Sbjct: 107 FDCFPVIHAILRKPEAIRIAIRQTIKEFEEDNCVYLELRTSPKETDFMTYEDYLQVCIES 166
Query: 682 MEKPXXXXXXXXXXXXXXN-RASQLQEVEEIADIAIERHKIHPDTVVGIELSGNPAVGNF 506
E R + I + E + + +VG+ELSG+P +
Sbjct: 167 FEAAKHEFPRIKTFLIVSLDRRMPFETAAHILGLIGEAQQ-RTNVIVGVELSGDPHLDGR 225
Query: 505 GDFIPALNRARQSGLKVTLHCGEVC-NPEEVLEMLNFKPERIGHGVCIHPKYGGTEETWI 329
+ R GL +T+H EV N +V + LN +P+RIGHG +H T
Sbjct: 226 RLLKLFVAARRFHGLGITIHLAEVLQNMADVEDYLNLRPDRIGHGTFLHTD----PYTEY 281
Query: 328 ALCQSKIPVEVCLTSNVNTKITPDYESHHFKELIEAGLPVVLCTDDKGVF-ATSLSQEYR 152
+ KIP+E+CL+SNV +K T +Y + HF + G+PV +CTDDKGV +L++EY
Sbjct: 282 LTNKYKIPLEICLSSNVYSKTTTNYRNSHFNYWRKRGVPVFICTDDKGVIPGATLTEEYY 341
Query: 151 LCAESFGLTRIQVAKLSLDAAQYIFS-EANIREL 53
A +F L+ ++ ++ DA F+ + N+ +L
Sbjct: 342 KAAITFDLSTEELIGINQDALLNSFAYKYNVTDL 375
>U61947-4|AAO44914.1| 349|Caenorhabditis elegans Hypothetical
protein C06G3.5b protein.
Length = 349
Score = 52.8 bits (121), Expect = 3e-07
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 4/146 (2%)
Frame = -2
Query: 502 DFIPALNRARQSGLKVTLHCGEVCNPEEVLEML-NFKPERIGHGVCIHPKYGGTEETWIA 326
+ + A A + G+ T+H GE P+EV++ + + ERIGHG + EE ++
Sbjct: 187 EVVAAFQEAHKRGIHRTVHAGESGGPKEVIKAIEDMYAERIGHGY----RVMRDEEMYLE 242
Query: 325 -LCQSK-IPVEVCLTSNVNTKITP-DYESHHFKELIEAGLPVVLCTDDKGVFATSLSQEY 155
SK + +E C S+V T P D+++H + + + DD F S+ E
Sbjct: 243 HFVNSKNVHLEACPYSSVMTGAVPLDWKNHPIARWAKDDVNFSVSRDDPTCFDNSMLSEL 302
Query: 154 RLCAESFGLTRIQVAKLSLDAAQYIF 77
L + GL Q+ K L+AA+ F
Sbjct: 303 TLVHKQIGLDVHQLWKAQLNAARSCF 328
>U61947-3|AAB03130.2| 391|Caenorhabditis elegans Hypothetical
protein C06G3.5a protein.
Length = 391
Score = 52.8 bits (121), Expect = 3e-07
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 4/146 (2%)
Frame = -2
Query: 502 DFIPALNRARQSGLKVTLHCGEVCNPEEVLEML-NFKPERIGHGVCIHPKYGGTEETWIA 326
+ + A A + G+ T+H GE P+EV++ + + ERIGHG + EE ++
Sbjct: 229 EVVAAFQEAHKRGIHRTVHAGESGGPKEVIKAIEDMYAERIGHGY----RVMRDEEMYLE 284
Query: 325 -LCQSK-IPVEVCLTSNVNTKITP-DYESHHFKELIEAGLPVVLCTDDKGVFATSLSQEY 155
SK + +E C S+V T P D+++H + + + DD F S+ E
Sbjct: 285 HFVNSKNVHLEACPYSSVMTGAVPLDWKNHPIARWAKDDVNFSVSRDDPTCFDNSMLSEL 344
Query: 154 RLCAESFGLTRIQVAKLSLDAAQYIF 77
L + GL Q+ K L+AA+ F
Sbjct: 345 TLVHKQIGLDVHQLWKAQLNAARSCF 370
>Z66523-7|CAA91416.2| 409|Caenorhabditis elegans Hypothetical
protein M05D6.7 protein.
Length = 409
Score = 28.7 bits (61), Expect = 5.7
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 6/64 (9%)
Frame = -2
Query: 424 EEVLEMLNFKPERIGHGVCIHPKYGGTEETWIALCQSKIPV------EVCLTSNVNTKIT 263
+ L + +F + +GV I GT E LCQS +PV + + SN T
Sbjct: 144 KSTLSLQSFSKNLVKYGVIIVDGVEGTSEATEKLCQSLVPVHDTFFGQFWVFSNSATNDE 203
Query: 262 PDYE 251
P YE
Sbjct: 204 PAYE 207
>U97189-9|AAC48161.1| 263|Caenorhabditis elegans Hypothetical
protein C48B6.9 protein.
Length = 263
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 645 LDMIERFIDGFSIALIILSIYCFFV 719
+D+I I F +A++ILSI FFV
Sbjct: 125 IDVIRDVIASFDVAIVILSILAFFV 149
>U10438-10|AAA19088.2| 345|Caenorhabditis elegans Hypothetical
protein B0280.10 protein.
Length = 345
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 694 YYQYIASLXCTVCHVEYFSAQYNNTHL 774
+ QY+ L CT CHVEY +Y ++
Sbjct: 213 FVQYV--LNCTTCHVEYNHVEYAQNNI 237
>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
protein F39C12.1 protein.
Length = 5105
Score = 27.9 bits (59), Expect = 9.9
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = -2
Query: 373 VCIHP--KYGGTEETWIALCQSKIPVEVCLTSNVNTKITPDYESHHFKELIEAGLPVVLC 200
+CI KYGGT E + + QSK + +NTK+ +E E I+ G P+ L
Sbjct: 4357 ICIRNSLKYGGTAEKKVIVEQSKFNFQ-----KLNTKLQTFFEC--LDEYIDVGTPIKLV 4409
Query: 199 TDDK 188
K
Sbjct: 4410 FSSK 4413
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,132,156
Number of Sequences: 27780
Number of extensions: 415494
Number of successful extensions: 961
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 958
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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