Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_pT_L06
(756 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0598 - 26514226-26514545,26516080-26516302 40 0.002
09_04_0038 - 13996505-13996836,13997047-13997077,13997307-139974... 40 0.003
07_01_0621 - 4606739-4606894,4606976-4607098,4608199-4608288 39 0.005
02_05_0085 - 25697860-25698142,25698631-25698946,25700481-257005... 38 0.007
01_06_1771 + 39787895-39788223,39788419-39788518,39788640-39788774 38 0.011
01_01_0474 - 3488739-3488876,3488996-3489118,3489878-3489991,349... 36 0.046
05_01_0489 - 4077365-4077502,4078105-4078227,4079019-4079135,407... 34 0.11
05_05_0229 - 23457438-23457629,23457706-23457828,23457913-234580... 34 0.14
04_03_0975 - 21370715-21370877,21371227-21371319,21371383-213714... 33 0.25
12_01_1031 - 10605581-10606088,10606360-10606420,10606448-106064... 33 0.32
10_08_0532 + 18580579-18580746,18581923-18581997,18582659-185838... 33 0.32
12_01_1027 + 10529545-10529777,10530269-10530668 32 0.43
05_06_0017 + 24964168-24964275,24965384-24965506,24965617-24965751 31 0.75
07_01_0656 - 4912985-4913143,4913700-4913822,4914081-4914215 31 1.3
02_01_0454 + 3263666-3265375 29 4.0
04_04_1575 + 34548774-34549109,34549979-34550185 29 5.3
03_06_0330 - 33178114-33178206,33178317-33178382,33179704-331798... 28 9.2
>04_04_0598 - 26514226-26514545,26516080-26516302
Length = 180
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = -3
Query: 754 GPXKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNGKKLDEFSG 575
GP KMI P + +++ E IAS+Y + S+PT + KNG+K D G
Sbjct: 104 GPCKMIDPVVGKLSKEYEGKLKCYKLNTDENPDIASQYGVRSIPTMMIFKNGEKKDAVIG 163
Query: 574 A 572
A
Sbjct: 164 A 164
>09_04_0038 -
13996505-13996836,13997047-13997077,13997307-13997420,
13997546-13997686,13997787-13997851,13997943-13998039,
13998096-13998257,13998360-13998473,14001263-14001311,
14001967-14002047,14003504-14003561,14003671-14004031,
14004129-14004213,14004320-14004591,14004712-14004914,
14005419-14005494
Length = 746
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/62 (32%), Positives = 33/62 (53%)
Frame = -3
Query: 754 GPXKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNGKKLDEFSG 575
GP + IGP +A E +A +N++S+P+F FV+NGK++D+ G
Sbjct: 672 GPCRFIGPVCKSLA-EKHRNVVFLKVDIDELNSVAYRWNVSSVPSFFFVRNGKEIDKVVG 730
Query: 574 AN 569
A+
Sbjct: 731 AD 732
>07_01_0621 - 4606739-4606894,4606976-4607098,4608199-4608288
Length = 122
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/64 (31%), Positives = 30/64 (46%)
Frame = -3
Query: 754 GPXKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNGKKLDEFSG 575
GP + I P E A + A +YN+ +MPTF+F+K+G + D+ G
Sbjct: 41 GPCRFIAPVFAEYAKKFPGAVFLKVDVDELKEV-AEKYNVEAMPTFLFIKDGAEADKVVG 99
Query: 574 ANVD 563
A D
Sbjct: 100 ARKD 103
>02_05_0085 -
25697860-25698142,25698631-25698946,25700481-25700518,
25700955-25701036,25701815-25702016
Length = 306
Score = 38.3 bits (85), Expect = 0.007
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = -3
Query: 754 GPXKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNGKKLDEFSG 575
GP KMI P + +++ E IA+++ I S+PT + KNG+K D G
Sbjct: 137 GPCKMIDPVIGKLSKEYEGKLNCYKLNTDENPDIATQFGIRSIPTMMIFKNGEKKDAVIG 196
Query: 574 A 572
A
Sbjct: 197 A 197
>01_06_1771 + 39787895-39788223,39788419-39788518,39788640-39788774
Length = 187
Score = 37.5 bits (83), Expect = 0.011
Identities = 19/64 (29%), Positives = 31/64 (48%)
Frame = -3
Query: 754 GPXKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNGKKLDEFSG 575
GP K++ PK E++ + +A E I +PTF +K+GK + E +G
Sbjct: 112 GPCKVMAPKFQEMSEKDQDVVFLKLDCNQDNKSLAKELGIKVVPTFKILKDGKVVKEVTG 171
Query: 574 ANVD 563
A +D
Sbjct: 172 AKLD 175
>01_01_0474 -
3488739-3488876,3488996-3489118,3489878-3489991,
3490416-3490452,3490584-3490675,3490878-3490956,
3491640-3491734,3491858-3491991,3492560-3492833,
3493743-3494015,3494976-3495512
Length = 631
Score = 35.5 bits (78), Expect = 0.046
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = -3
Query: 754 GPXKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNGKKLDEFSG 575
GP ++I P E++ + +S ++I + PTF F+KNG+++D+ G
Sbjct: 556 GPCRVIAPVYAEMS-QTYPQFMFLTIDVDELMDFSSSWDIRATPTFFFLKNGEQVDKLVG 614
Query: 574 AN 569
AN
Sbjct: 615 AN 616
>05_01_0489 -
4077365-4077502,4078105-4078227,4079019-4079135,
4079243-4079263
Length = 132
Score = 34.3 bits (75), Expect = 0.11
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = -3
Query: 652 ASEYNINSMPTFVFVKNGKKLDEFSGAN 569
+S ++I + PTF F+KN K++D+ GAN
Sbjct: 90 SSSWDIRATPTFFFIKNEKQVDKLVGAN 117
>05_05_0229 -
23457438-23457629,23457706-23457828,23457913-23458026,
23462062-23462597,23463258-23464545
Length = 750
Score = 33.9 bits (74), Expect = 0.14
Identities = 10/27 (37%), Positives = 21/27 (77%)
Frame = -3
Query: 649 SEYNINSMPTFVFVKNGKKLDEFSGAN 569
++Y++ + PTF+F+KN +++D+ G N
Sbjct: 704 TQYDVRATPTFIFMKNNEEIDKLVGGN 730
>04_03_0975 -
21370715-21370877,21371227-21371319,21371383-21371466,
21371745-21371869,21372360-21372600,21373640-21373734
Length = 266
Score = 33.1 bits (72), Expect = 0.25
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = -3
Query: 754 GPXKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNGKKLDEFSG 575
GP +M+ +DEIA E +A+ Y+I +PT + K+G+K +G
Sbjct: 46 GPCRMVHRIVDEIAQEYAGRIKCYKLDTDDYPQVATSYSIERIPTVLLFKDGEKTHSITG 105
>12_01_1031 - 10605581-10606088,10606360-10606420,10606448-10606491,
10606664-10608382,10609848-10610791
Length = 1091
Score = 32.7 bits (71), Expect = 0.32
Identities = 14/26 (53%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
Frame = -3
Query: 643 YNINSM-PTFVFVKNGKKLDEFSGAN 569
Y+I + PTF FVK+G+K+D+ GAN
Sbjct: 1047 YDIEGIVPTFFFVKDGEKIDKIPGAN 1072
>10_08_0532 +
18580579-18580746,18581923-18581997,18582659-18583887,
18584853-18585013,18585272-18585279,18587737-18588768
Length = 890
Score = 32.7 bits (71), Expect = 0.32
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -3
Query: 643 YNINSMPTFVFVKNGKKLDEFSGAN 569
Y + ++P FVF+K GK +D GAN
Sbjct: 69 YGVTAVPYFVFLKEGKTVDTLEGAN 93
>12_01_1027 + 10529545-10529777,10530269-10530668
Length = 210
Score = 32.3 bits (70), Expect = 0.43
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = -3
Query: 652 ASEYNINSM-PTFVFVKNGKKLDEFSGA 572
A Y++N + PTF FVK G+K+D GA
Sbjct: 50 ADSYDVNGVVPTFTFVKAGQKIDMIQGA 77
>05_06_0017 + 24964168-24964275,24965384-24965506,24965617-24965751
Length = 121
Score = 31.5 bits (68), Expect = 0.75
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = -3
Query: 754 GPXKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNGKKLDEFSG 575
GP ++I P ++A + IA ++++ +MPTF+F+K G D G
Sbjct: 47 GPCRIIAPVFADLAKK-HTNAVFLKVDVDELKPIAEQFSVEAMPTFLFMKEGDVKDRVVG 105
Query: 574 ANVD 563
A D
Sbjct: 106 AMKD 109
>07_01_0656 - 4912985-4913143,4913700-4913822,4914081-4914215
Length = 138
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/64 (26%), Positives = 27/64 (42%)
Frame = -3
Query: 754 GPXKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNGKKLDEFSG 575
GP KM+ P E+A A + + +MPTFV + G+++ G
Sbjct: 56 GPCKMMEPVFKEMAGRFTDVAFLKVDVDELAEV-ARTWRVEAMPTFVLARGGEEVGRIVG 114
Query: 574 ANVD 563
A+ D
Sbjct: 115 ADKD 118
>02_01_0454 + 3263666-3265375
Length = 569
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 369 FCIPEAANTKKLISSNSLQTLKTF 440
FC+P A T LISSN L L+T+
Sbjct: 389 FCLPSKALTDDLISSNFLSWLQTY 412
>04_04_1575 + 34548774-34549109,34549979-34550185
Length = 180
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/55 (23%), Positives = 24/55 (43%)
Frame = -3
Query: 754 GPXKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNGKKL 590
GP ++I P +D A E + EY + +P+ + K+GK++
Sbjct: 98 GPCRLIAPVVDWAAEEYEGRLKIVKIDHDANPQLIEEYKVYGLPSLILFKDGKEV 152
>03_06_0330 -
33178114-33178206,33178317-33178382,33179704-33179826,
33179930-33180067
Length = 139
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/54 (25%), Positives = 23/54 (42%)
Frame = -3
Query: 754 GPXKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNGKK 593
GP + I P ++A A ++ + +MPTFV +K GK+
Sbjct: 57 GPCRFIEPAFKDMAGRFADAVFFKIDVDELSEV-ARQWKVEAMPTFVLIKGGKE 109
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,116,322
Number of Sequences: 37544
Number of extensions: 209194
Number of successful extensions: 324
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 324
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2016060588
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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