Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_pT_L06
(756 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF106589-2|AAC78230.1| 107|Caenorhabditis elegans Hypothetical ... 54 8e-08
Z81552-7|CAB04487.2| 606|Caenorhabditis elegans Hypothetical pr... 42 4e-04
AL117201-5|CAB57916.1| 606|Caenorhabditis elegans Hypothetical ... 42 4e-04
AF250925-1|AAF74721.1| 542|Caenorhabditis elegans PNGase protein. 37 0.013
Z71178-7|CAA94881.1| 119|Caenorhabditis elegans Hypothetical pr... 36 0.023
U23168-7|AAC38808.1| 115|Caenorhabditis elegans Hypothetical pr... 35 0.054
U23168-6|AAP86623.1| 114|Caenorhabditis elegans Hypothetical pr... 35 0.054
DQ241300-1|ABB45864.1| 114|Caenorhabditis elegans TRX-1b protein. 35 0.054
DQ241299-1|ABB45863.1| 115|Caenorhabditis elegans TRX-1a protein. 35 0.054
AF143900-1|AAF66677.1| 284|Caenorhabditis elegans thioredoxin-l... 34 0.095
AF143405-1|AAF66636.1| 284|Caenorhabditis elegans thioredoxin-l... 34 0.095
AC024810-17|AAF60759.1| 284|Caenorhabditis elegans Hypothetical... 34 0.095
AC024827-2|AAF60805.2| 254|Caenorhabditis elegans Hypothetical ... 31 1.2
AF125951-5|AAL27238.1| 345|Caenorhabditis elegans Hypothetical ... 30 1.5
AF125951-4|AAT68898.1| 342|Caenorhabditis elegans Hypothetical ... 30 1.5
Z54218-1|CAA90954.1| 315|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z81486-6|CAB03988.2| 309|Caenorhabditis elegans Hypothetical pr... 28 6.2
>AF106589-2|AAC78230.1| 107|Caenorhabditis elegans Hypothetical
protein Y44E3A.3 protein.
Length = 107
Score = 54.4 bits (125), Expect = 8e-08
Identities = 26/62 (41%), Positives = 36/62 (58%)
Frame = -3
Query: 754 GPXKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNGKKLDEFSG 575
GP +MI P+++E+AAE + EY INSMPTF+ + +G K D+FSG
Sbjct: 33 GPCQMIKPRVEELAAEHKDRLSILKIDVDECDGVGEEYEINSMPTFLLIVDGIKKDQFSG 92
Query: 574 AN 569
AN
Sbjct: 93 AN 94
>Z81552-7|CAB04487.2| 606|Caenorhabditis elegans Hypothetical
protein F56G4.5 protein.
Length = 606
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/62 (33%), Positives = 32/62 (51%)
Frame = -3
Query: 754 GPXKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNGKKLDEFSG 575
GP +MI P ++ +AE YNI++MPTF+F+KN +++D G
Sbjct: 35 GPCRMISPIFEQFSAEYGNATFLKVNCDVARDI-VQRYNISAMPTFIFLKNRQQVDMVRG 93
Query: 574 AN 569
AN
Sbjct: 94 AN 95
>AL117201-5|CAB57916.1| 606|Caenorhabditis elegans Hypothetical
protein F56G4.5 protein.
Length = 606
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/62 (33%), Positives = 32/62 (51%)
Frame = -3
Query: 754 GPXKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNGKKLDEFSG 575
GP +MI P ++ +AE YNI++MPTF+F+KN +++D G
Sbjct: 35 GPCRMISPIFEQFSAEYGNATFLKVNCDVARDI-VQRYNISAMPTFIFLKNRQQVDMVRG 93
Query: 574 AN 569
AN
Sbjct: 94 AN 95
>AF250925-1|AAF74721.1| 542|Caenorhabditis elegans PNGase protein.
Length = 542
Score = 37.1 bits (82), Expect = 0.013
Identities = 14/25 (56%), Positives = 21/25 (84%)
Frame = -3
Query: 643 YNINSMPTFVFVKNGKKLDEFSGAN 569
YNI++MPTF+F+KN +++D GAN
Sbjct: 7 YNISAMPTFIFLKNRQQVDMVRGAN 31
>Z71178-7|CAA94881.1| 119|Caenorhabditis elegans Hypothetical
protein B0024.9 protein.
Length = 119
Score = 36.3 bits (80), Expect = 0.023
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = -3
Query: 754 GPXKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNGKKLDEFSG 575
GP + +GP+L+E +A +Y I+++PT KNG+K+ FSG
Sbjct: 43 GPCQALGPRLEEKVNGRQGSVLLAKINVDHAGELAMDYGISAVPTVFAFKNGEKISGFSG 102
>U23168-7|AAC38808.1| 115|Caenorhabditis elegans Hypothetical
protein B0228.5a protein.
Length = 115
Score = 35.1 bits (77), Expect = 0.054
Identities = 19/64 (29%), Positives = 27/64 (42%)
Frame = -3
Query: 754 GPXKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNGKKLDEFSG 575
GP K I P E+A + S+Y++ MPTF+F KNG ++ G
Sbjct: 40 GPCKAIAPLYKELATT-HKGIIFCKVDVDEAEDLCSKYDVKMMPTFIFTKNGDAIEALEG 98
Query: 574 ANVD 563
D
Sbjct: 99 CVED 102
>U23168-6|AAP86623.1| 114|Caenorhabditis elegans Hypothetical
protein B0228.5b protein.
Length = 114
Score = 35.1 bits (77), Expect = 0.054
Identities = 19/64 (29%), Positives = 27/64 (42%)
Frame = -3
Query: 754 GPXKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNGKKLDEFSG 575
GP K I P E+A + S+Y++ MPTF+F KNG ++ G
Sbjct: 39 GPCKAIAPLYKELATT-HKGIIFCKVDVDEAEDLCSKYDVKMMPTFIFTKNGDAIEALEG 97
Query: 574 ANVD 563
D
Sbjct: 98 CVED 101
>DQ241300-1|ABB45864.1| 114|Caenorhabditis elegans TRX-1b protein.
Length = 114
Score = 35.1 bits (77), Expect = 0.054
Identities = 19/64 (29%), Positives = 27/64 (42%)
Frame = -3
Query: 754 GPXKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNGKKLDEFSG 575
GP K I P E+A + S+Y++ MPTF+F KNG ++ G
Sbjct: 39 GPCKAIAPLYKELATT-HKGIIFCKVDVDEAEDLCSKYDVKMMPTFIFTKNGDAIEALEG 97
Query: 574 ANVD 563
D
Sbjct: 98 CVED 101
>DQ241299-1|ABB45863.1| 115|Caenorhabditis elegans TRX-1a protein.
Length = 115
Score = 35.1 bits (77), Expect = 0.054
Identities = 19/64 (29%), Positives = 27/64 (42%)
Frame = -3
Query: 754 GPXKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNGKKLDEFSG 575
GP K I P E+A + S+Y++ MPTF+F KNG ++ G
Sbjct: 40 GPCKAIAPLYKELATT-HKGIIFCKVDVDEAEDLCSKYDVKMMPTFIFTKNGDAIEALEG 98
Query: 574 ANVD 563
D
Sbjct: 99 CVED 102
>AF143900-1|AAF66677.1| 284|Caenorhabditis elegans thioredoxin-like
protein protein.
Length = 284
Score = 34.3 bits (75), Expect = 0.095
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = -3
Query: 754 GPXKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNGKKLDEFSG 575
GP KMI P + ++ + +SE +NSMPTF+ ++G ++++ G
Sbjct: 34 GPCKMIAPTFEALSNQYLGAVFLKVDVEICEKT-SSENGVNSMPTFMVFQSGVRVEQMKG 92
Query: 574 AN 569
A+
Sbjct: 93 AD 94
>AF143405-1|AAF66636.1| 284|Caenorhabditis elegans thioredoxin-like
protein TXL protein.
Length = 284
Score = 34.3 bits (75), Expect = 0.095
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = -3
Query: 754 GPXKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNGKKLDEFSG 575
GP KMI P + ++ + +SE +NSMPTF+ ++G ++++ G
Sbjct: 34 GPCKMIAPTFEALSNQYLGAVFLKVDVEICEKT-SSENGVNSMPTFMVFQSGVRVEQMKG 92
Query: 574 AN 569
A+
Sbjct: 93 AD 94
>AC024810-17|AAF60759.1| 284|Caenorhabditis elegans Hypothetical
protein Y54E10A.3 protein.
Length = 284
Score = 34.3 bits (75), Expect = 0.095
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = -3
Query: 754 GPXKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNGKKLDEFSG 575
GP KMI P + ++ + +SE +NSMPTF+ ++G ++++ G
Sbjct: 34 GPCKMIAPTFEALSNQYLGAVFLKVDVEICEKT-SSENGVNSMPTFMVFQSGVRVEQMKG 92
Query: 574 AN 569
A+
Sbjct: 93 AD 94
>AC024827-2|AAF60805.2| 254|Caenorhabditis elegans Hypothetical
protein Y55F3AR.2 protein.
Length = 254
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 652 ASEYNINSMPTFVFVKNGKKLDEFSGAN 569
A+ Y +N+MPTF+ NG+K GA+
Sbjct: 67 AATYGVNAMPTFIAFVNGQKKATIQGAD 94
>AF125951-5|AAL27238.1| 345|Caenorhabditis elegans Hypothetical
protein D2063.3a protein.
Length = 345
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/57 (26%), Positives = 25/57 (43%)
Frame = -3
Query: 745 KMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNGKKLDEFSG 575
+ + LD++ AE+ I+ + I + PT VF NGK++D G
Sbjct: 35 EQVNQLLDDLLAEIALPLRAAFIDAEALPGISLNFKITAAPTLVFFSNGKEVDRIDG 91
>AF125951-4|AAT68898.1| 342|Caenorhabditis elegans Hypothetical
protein D2063.3b protein.
Length = 342
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/57 (26%), Positives = 25/57 (43%)
Frame = -3
Query: 745 KMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNGKKLDEFSG 575
+ + LD++ AE+ I+ + I + PT VF NGK++D G
Sbjct: 35 EQVNQLLDDLLAEIALPLRAAFIDAEALPGISLNFKITAAPTLVFFSNGKEVDRIDG 91
>Z54218-1|CAA90954.1| 315|Caenorhabditis elegans Hypothetical
protein F37B12.1 protein.
Length = 315
Score = 28.7 bits (61), Expect = 4.7
Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 8/73 (10%)
Frame = +3
Query: 372 CIPEAANTKKLISSNSLQTLKTFFIYILKTYTCFFF--------KFHLSFHRRLRTTLVS 527
C KL + S ++K +Y L YTC FF LSF R ++
Sbjct: 207 CTSTVTTAPKLTKAKSCDSIKRTRLYFLVVYTCRFFSPTATSHSSHSLSFLGTCRVFWLN 266
Query: 528 IYLCLRIVVLSLS 566
+ L + +LSLS
Sbjct: 267 FTVFLSVSLLSLS 279
>Z81486-6|CAB03988.2| 309|Caenorhabditis elegans Hypothetical
protein C53A5.8 protein.
Length = 309
Score = 28.3 bits (60), Expect = 6.2
Identities = 21/61 (34%), Positives = 31/61 (50%)
Frame = +3
Query: 426 TLKTFFIYILKTYTCFFFKFHLSFHRRLRTTLVSIYLCLRIVVLSLSTLAPENSSSFLPF 605
T+ F+ IL F KF SF+R L+ L++ LC + SL ++ +N FLP
Sbjct: 29 TITVVFMLILLFLFQFSKKFSYSFYRILQLDLITNILC---NLNSLFSVRFQNHLMFLPV 85
Query: 606 L 608
L
Sbjct: 86 L 86
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,160,390
Number of Sequences: 27780
Number of extensions: 226703
Number of successful extensions: 481
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 480
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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