Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_pT_L05
(695 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 24 1.2
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 23 2.8
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 23 2.8
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 23 2.8
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 23 2.8
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 23 2.8
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 23 2.8
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 23 3.7
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 21 8.5
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 24.2 bits (50), Expect = 1.2
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 66 SVLKYLLSYFIEYNSNFNPNSQSQIKFTVIYPVLP 170
++LK F EY+ N P S QI V +LP
Sbjct: 43 TLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLP 77
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.8
Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
Frame = +3
Query: 78 YLLSYFIEYNSNFNPNSQSQIKFTVI----YPVLPAKECSSSSQNVLAHHIYFSTLQSLP 245
Y S + YN+N+N N + + +I PV C + + + S + +P
Sbjct: 89 YKYSNYNNYNNNYNTNYKKLQYYNIINIEQIPVPVPIYCGNFPPRPMGP--WISIQEQVP 146
Query: 246 LFYYFRPASVPYRAIP 293
F Y P + R IP
Sbjct: 147 RFRYIGPPTPFPRFIP 162
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.8
Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
Frame = +3
Query: 78 YLLSYFIEYNSNFNPNSQSQIKFTVI----YPVLPAKECSSSSQNVLAHHIYFSTLQSLP 245
Y S + YN+N+N N + + +I PV C + + + S + +P
Sbjct: 89 YKYSNYNNYNNNYNTNYKKLQYYNIINIEQIPVPVPIYCGNFPPRPMGP--WISIQEQVP 146
Query: 246 LFYYFRPASVPYRAIP 293
F Y P + R IP
Sbjct: 147 RFRYIGPPTPFPRFIP 162
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.8
Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
Frame = +3
Query: 78 YLLSYFIEYNSNFNPNSQSQIKFTVI----YPVLPAKECSSSSQNVLAHHIYFSTLQSLP 245
Y S + YN+N+N N + + +I PV C + + + S + +P
Sbjct: 89 YKYSNYNNYNNNYNTNYKKLQYYNIINIEQIPVPVPIYCGNFPPRPMGP--WISIQEQVP 146
Query: 246 LFYYFRPASVPYRAIP 293
F Y P + R IP
Sbjct: 147 RFRYIGPPTPFPRFIP 162
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.8
Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
Frame = +3
Query: 78 YLLSYFIEYNSNFNPNSQSQIKFTVI----YPVLPAKECSSSSQNVLAHHIYFSTLQSLP 245
Y S + YN+N+N N + + +I PV C + + + S + +P
Sbjct: 89 YKYSNYNNYNNNYNTNYKKLQYYNIINIEQIPVPVPIYCGNFPPRPMGP--WISIQEQVP 146
Query: 246 LFYYFRPASVPYRAIP 293
F Y P + R IP
Sbjct: 147 RFRYIGPPTPFPRFIP 162
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.8
Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
Frame = +3
Query: 78 YLLSYFIEYNSNFNPNSQSQIKFTVI----YPVLPAKECSSSSQNVLAHHIYFSTLQSLP 245
Y S + YN+N+N N + + +I PV C + + + S + +P
Sbjct: 89 YKYSNYNNYNNNYNTNYKKLQYYNIINIEQIPVPVPIYCGNFPPRPMGP--WISIQEQVP 146
Query: 246 LFYYFRPASVPYRAIP 293
F Y P + R IP
Sbjct: 147 RFRYIGPPTPFPRFIP 162
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.8
Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
Frame = +3
Query: 78 YLLSYFIEYNSNFNPNSQSQIKFTVI----YPVLPAKECSSSSQNVLAHHIYFSTLQSLP 245
Y S + YN+N+N N + + +I PV C + + + S + +P
Sbjct: 89 YKYSNYNNYNNNYNTNYKKLQYYNIINIEQIPVPVPIYCGNFPPRPMGP--WISIQEQVP 146
Query: 246 LFYYFRPASVPYRAIP 293
F Y P + R IP
Sbjct: 147 RFRYIGPPTPFPRFIP 162
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 22.6 bits (46), Expect = 3.7
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -3
Query: 312 LENEKSQEWHDMEL 271
L NE+ Q WHD+ +
Sbjct: 148 LVNEQGQTWHDLRV 161
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 21.4 bits (43), Expect = 8.5
Identities = 7/16 (43%), Positives = 13/16 (81%)
Frame = +1
Query: 250 SIIFVLHQFHIVPFLT 297
+ I +++QFHI+ F+T
Sbjct: 478 AFIGIVNQFHILQFIT 493
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,186
Number of Sequences: 438
Number of extensions: 3145
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21317625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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