Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_pT_L01
(724 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF087660-1|AAD23566.1| 156|Homo sapiens NADH:ubiquinone oxidore... 139 8e-33
AC002400-1|AAC05814.1| 161|Homo sapiens Acyl carrier protein, M... 139 8e-33
BC058920-1|AAH58920.1| 156|Homo sapiens NADH dehydrogenase (ubi... 136 1e-31
EF036490-1|ABO65076.1| 124|Homo sapiens NADH:ubiquinone oxidore... 96 1e-19
BC126313-1|AAI26314.1| 1044|Homo sapiens MEGF11 protein protein. 32 2.4
BC117419-1|AAI17420.1| 1044|Homo sapiens MEGF11 protein protein. 32 2.4
AB300051-1|BAF64841.1| 1044|Homo sapiens MEGF11 protein. 32 2.4
AB058677-1|BAB47410.1| 969|Homo sapiens MEGF11 protein (KIAA178... 32 2.4
BC008755-1|AAH08755.1| 867|Homo sapiens ABCA2 protein protein. 30 7.3
AL807752-22|CAI12768.1| 2435|Homo sapiens ATP-binding cassette, ... 30 7.3
AL807752-21|CAI12767.1| 267|Homo sapiens ATP-binding cassette, ... 30 7.3
AF327705-1|AAK14335.1| 2436|Homo sapiens ABC transporter ABCA2 p... 30 7.3
AF327657-1|AAK14334.1| 2436|Homo sapiens ABC transporter ABCA2 p... 30 7.3
AF178941-1|AAG09372.1| 2436|Homo sapiens ATP-binding cassette su... 30 7.3
AB177854-1|BAD66832.1| 1440|Homo sapiens KIAA1062 splice variant... 30 7.3
AB028985-1|BAA83014.2| 1771|Homo sapiens KIAA1062 protein protein. 30 7.3
>AF087660-1|AAD23566.1| 156|Homo sapiens NADH:ubiquinone
oxidoreductase SDAP subunit protein.
Length = 156
Score = 139 bits (337), Expect = 8e-33
Identities = 75/146 (51%), Positives = 99/146 (67%), Gaps = 1/146 (0%)
Frame = -3
Query: 644 SAFGGLLR-RSTTYRTSVTCRLSTVALQQKFSTIKAAVXIYKSQALQNGNEKHGIRKYSG 468
+AF L R R ++ L + Q + T++ A+ + A G R+YS
Sbjct: 15 AAFAPLPRVRMLAVARPLSTALCSAGTQTRLGTLQPALVL----AQVPGRVTQLCRQYSD 70
Query: 467 GPPLTLDLIKSRVLLVLQLYDXINPEQXTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEI 288
PPLTL+ I+ RVL VL+LYD I+PE+ +V+SHFM DLGLDSLD VE+IMAMEDEFGFEI
Sbjct: 71 MPPLTLEGIQDRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFGFEI 130
Query: 287 PDGDAERLVRPKDIVQYIADKEDIYE 210
PD DAE+L+ P++IV YIADK+D+YE
Sbjct: 131 PDIDAEKLMCPQEIVDYIADKKDVYE 156
>AC002400-1|AAC05814.1| 161|Homo sapiens Acyl carrier protein,
Mitochondrial (ACP) (5'partial) protein.
Length = 161
Score = 139 bits (337), Expect = 8e-33
Identities = 75/146 (51%), Positives = 99/146 (67%), Gaps = 1/146 (0%)
Frame = -3
Query: 644 SAFGGLLR-RSTTYRTSVTCRLSTVALQQKFSTIKAAVXIYKSQALQNGNEKHGIRKYSG 468
+AF L R R ++ L + Q + T++ A+ + A G R+YS
Sbjct: 20 AAFAPLPRVRMLAVARPLSTALCSAGTQTRLGTLQPALVL----AQVPGRVTQLCRQYSD 75
Query: 467 GPPLTLDLIKSRVLLVLQLYDXINPEQXTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEI 288
PPLTL+ I+ RVL VL+LYD I+PE+ +V+SHFM DLGLDSLD VE+IMAMEDEFGFEI
Sbjct: 76 MPPLTLEGIQDRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFGFEI 135
Query: 287 PDGDAERLVRPKDIVQYIADKEDIYE 210
PD DAE+L+ P++IV YIADK+D+YE
Sbjct: 136 PDIDAEKLMCPQEIVDYIADKKDVYE 161
>BC058920-1|AAH58920.1| 156|Homo sapiens NADH dehydrogenase
(ubiquinone) 1, alpha/beta subcomplex, 1, 8kDa protein.
Length = 156
Score = 136 bits (328), Expect = 1e-31
Identities = 74/146 (50%), Positives = 98/146 (67%), Gaps = 1/146 (0%)
Frame = -3
Query: 644 SAFGGLLR-RSTTYRTSVTCRLSTVALQQKFSTIKAAVXIYKSQALQNGNEKHGIRKYSG 468
+AF L R R ++ L + Q + T++ A+ + A G R+YS
Sbjct: 15 AAFAPLPRVRMLAVARPLSTALCSAGTQTRLGTLQPALVL----AQVPGRVTQLCRQYSD 70
Query: 467 GPPLTLDLIKSRVLLVLQLYDXINPEQXTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEI 288
PPLTL+ I+ RVL VL+LYD I+PE+ +V+SHFM DLGLDSLD VE+IMAMEDEFGFEI
Sbjct: 71 MPPLTLEGIQDRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFGFEI 130
Query: 287 PDGDAERLVRPKDIVQYIADKEDIYE 210
P DAE+L+ P++IV YIADK+D+YE
Sbjct: 131 PYIDAEKLMCPQEIVDYIADKKDVYE 156
>EF036490-1|ABO65076.1| 124|Homo sapiens NADH:ubiquinone
oxidoreductase SDAP subunit protein.
Length = 124
Score = 95.9 bits (228), Expect = 1e-19
Identities = 55/117 (47%), Positives = 73/117 (62%), Gaps = 1/117 (0%)
Frame = -3
Query: 644 SAFGGLLR-RSTTYRTSVTCRLSTVALQQKFSTIKAAVXIYKSQALQNGNEKHGIRKYSG 468
+AF L R R ++ L + Q + T++ A+ + A G R+YS
Sbjct: 12 AAFAPLPRVRMLAVARPLSTALCSAGTQTRLGTLQPALVL----AQVPGRVTQLCRQYSD 67
Query: 467 GPPLTLDLIKSRVLLVLQLYDXINPEQXTVDSHFMNDLGLDSLDHVEVIMAMEDEFG 297
PPLTL+ I+ RVL VL+LYD I+PE+ +V+SHFM DLGLDSLD VE+IMAMEDEFG
Sbjct: 68 MPPLTLEGIQDRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFG 124
>BC126313-1|AAI26314.1| 1044|Homo sapiens MEGF11 protein protein.
Length = 1044
Score = 31.9 bits (69), Expect = 2.4
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = -1
Query: 583 FRPLRCSKSSAQLKPLSXYTKVRPFRMGTRNMVSASTAVAL 461
F+ +RC +++ ++ L+ YTK+ P R+ V A T + L
Sbjct: 817 FKGIRCDQAALMMEELNPYTKISPALGAERHSVGAVTGIML 857
>BC117419-1|AAI17420.1| 1044|Homo sapiens MEGF11 protein protein.
Length = 1044
Score = 31.9 bits (69), Expect = 2.4
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = -1
Query: 583 FRPLRCSKSSAQLKPLSXYTKVRPFRMGTRNMVSASTAVAL 461
F+ +RC +++ ++ L+ YTK+ P R+ V A T + L
Sbjct: 817 FKGIRCDQAALMMEELNPYTKISPALGAERHSVGAVTGIML 857
>AB300051-1|BAF64841.1| 1044|Homo sapiens MEGF11 protein.
Length = 1044
Score = 31.9 bits (69), Expect = 2.4
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = -1
Query: 583 FRPLRCSKSSAQLKPLSXYTKVRPFRMGTRNMVSASTAVAL 461
F+ +RC +++ ++ L+ YTK+ P R+ V A T + L
Sbjct: 817 FKGIRCDQAALMMEELNPYTKISPALGAERHSVGAVTGIML 857
>AB058677-1|BAB47410.1| 969|Homo sapiens MEGF11 protein (KIAA1781)
protein.
Length = 969
Score = 31.9 bits (69), Expect = 2.4
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = -1
Query: 583 FRPLRCSKSSAQLKPLSXYTKVRPFRMGTRNMVSASTAVAL 461
F+ +RC +++ ++ L+ YTK+ P R+ V A T + L
Sbjct: 742 FKGIRCDQAALMMEELNPYTKISPALGAERHSVGAVTGIML 782
>BC008755-1|AAH08755.1| 867|Homo sapiens ABCA2 protein protein.
Length = 867
Score = 30.3 bits (65), Expect = 7.3
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Frame = +3
Query: 195 YIFLLFINIFL-----VSNVLDNVFWSNQSLCITIRYLKSKFIFHCHYDL 329
Y+FL+ IN+F+ V+ L +F ++ L + YLKS F+ +Y+L
Sbjct: 336 YVFLIVINLFIGITATVATFLLQLFEHDKDLKVVNSYLKSCFLIFPNYNL 385
>AL807752-22|CAI12768.1| 2435|Homo sapiens ATP-binding cassette,
sub-family A (ABC1), membertor protein.
Length = 2435
Score = 30.3 bits (65), Expect = 7.3
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Frame = +3
Query: 195 YIFLLFINIFL-----VSNVLDNVFWSNQSLCITIRYLKSKFIFHCHYDL 329
Y+FL+ IN+F+ V+ L +F ++ L + YLKS F+ +Y+L
Sbjct: 1904 YVFLIVINLFIGITATVATFLLQLFEHDKDLKVVNSYLKSCFLIFPNYNL 1953
>AL807752-21|CAI12767.1| 267|Homo sapiens ATP-binding cassette,
sub-family A (ABC1), memberase) protein.
Length = 267
Score = 30.3 bits (65), Expect = 7.3
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Frame = +3
Query: 195 YIFLLFINIFL-----VSNVLDNVFWSNQSLCITIRYLKSKFIFHCHYDL 329
Y+FL+ IN+F+ V+ L +F ++ L + YLKS F+ +Y+L
Sbjct: 81 YVFLIVINLFIGITATVATFLLQLFEHDKDLKVVNSYLKSCFLIFPNYNL 130
>AF327705-1|AAK14335.1| 2436|Homo sapiens ABC transporter ABCA2
protein.
Length = 2436
Score = 30.3 bits (65), Expect = 7.3
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Frame = +3
Query: 195 YIFLLFINIFL-----VSNVLDNVFWSNQSLCITIRYLKSKFIFHCHYDL 329
Y+FL+ IN+F+ V+ L +F ++ L + YLKS F+ +Y+L
Sbjct: 1905 YVFLIVINLFIGITATVATFLLQLFEHDKDLKVVNSYLKSCFLIFPNYNL 1954
>AF327657-1|AAK14334.1| 2436|Homo sapiens ABC transporter ABCA2
protein.
Length = 2436
Score = 30.3 bits (65), Expect = 7.3
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Frame = +3
Query: 195 YIFLLFINIFL-----VSNVLDNVFWSNQSLCITIRYLKSKFIFHCHYDL 329
Y+FL+ IN+F+ V+ L +F ++ L + YLKS F+ +Y+L
Sbjct: 1905 YVFLIVINLFIGITATVATFLLQLFEHDKDLKVVNSYLKSCFLIFPNYNL 1954
>AF178941-1|AAG09372.1| 2436|Homo sapiens ATP-binding cassette
sub-family A member 2 protein.
Length = 2436
Score = 30.3 bits (65), Expect = 7.3
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Frame = +3
Query: 195 YIFLLFINIFL-----VSNVLDNVFWSNQSLCITIRYLKSKFIFHCHYDL 329
Y+FL+ IN+F+ V+ L +F ++ L + YLKS F+ +Y+L
Sbjct: 1905 YVFLIVINLFIGITATVATFLLQLFEHDKDLKVVNSYLKSCFLIFPNYNL 1954
>AB177854-1|BAD66832.1| 1440|Homo sapiens KIAA1062 splice variant 1
protein.
Length = 1440
Score = 30.3 bits (65), Expect = 7.3
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Frame = +3
Query: 195 YIFLLFINIFL-----VSNVLDNVFWSNQSLCITIRYLKSKFIFHCHYDL 329
Y+FL+ IN+F+ V+ L +F ++ L + YLKS F+ +Y+L
Sbjct: 1254 YVFLIVINLFIGITATVATFLLQLFEHDKDLKVVNSYLKSCFLIFPNYNL 1303
>AB028985-1|BAA83014.2| 1771|Homo sapiens KIAA1062 protein protein.
Length = 1771
Score = 30.3 bits (65), Expect = 7.3
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Frame = +3
Query: 195 YIFLLFINIFL-----VSNVLDNVFWSNQSLCITIRYLKSKFIFHCHYDL 329
Y+FL+ IN+F+ V+ L +F ++ L + YLKS F+ +Y+L
Sbjct: 1240 YVFLIVINLFIGITATVATFLLQLFEHDKDLKVVNSYLKSCFLIFPNYNL 1289
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,755,703
Number of Sequences: 237096
Number of extensions: 1975630
Number of successful extensions: 6119
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 6002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6102
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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