Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_pT_K21
(455 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT007132-1|AAP35796.1| 210|Homo sapiens neighbor of COX4 protein. 46 6e-05
BC020250-1|AAH20250.1| 210|Homo sapiens COX4 neighbor protein. 46 6e-05
BC007445-1|AAH07445.1| 210|Homo sapiens COX4 neighbor protein. 46 6e-05
BC005886-1|AAH05886.1| 210|Homo sapiens COX4 neighbor protein. 46 6e-05
BC001472-1|AAH01472.1| 210|Homo sapiens COX4 neighbor protein. 46 6e-05
AF005888-1|AAB94489.1| 210|Homo sapiens COX4AL protein. 46 6e-05
BC002491-1|AAH02491.1| 208|Homo sapiens chromosome 14 open read... 43 6e-04
AY368908-1|AAQ83690.1| 208|Homo sapiens CGI-112 protein protein. 43 6e-04
AF151870-1|AAD34107.1| 208|Homo sapiens CGI-112 protein protein. 43 6e-04
U69139-1|AAB40660.1| 392|Homo sapiens zyginI protein. 29 10.0
U60060-1|AAC51282.1| 392|Homo sapiens FEZ1 protein. 29 10.0
CR541954-1|CAG46752.1| 392|Homo sapiens FEZ1 protein. 29 10.0
CR456817-1|CAG33098.1| 392|Homo sapiens FEZ1 protein. 29 10.0
BC009545-1|AAH09545.1| 392|Homo sapiens fasciculation and elong... 29 10.0
>BT007132-1|AAP35796.1| 210|Homo sapiens neighbor of COX4 protein.
Length = 210
Score = 46.0 bits (104), Expect = 6e-05
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = -1
Query: 434 SPAIXVHKYSDGKWRPRESLIVFQS--PYVLETVSHLLQKGVERDLVDFDNYLDDQSQDW 261
+P I V+++ + +WR R+ + P + LL LVDFDN+LDD DW
Sbjct: 138 APTIHVYEHHENRWRCRDPHHDYCEDWPEAQRISASLLDSRSYETLVDFDNHLDDIRNDW 197
Query: 260 TNQGIEKLV 234
TN I K V
Sbjct: 198 TNPEINKAV 206
>BC020250-1|AAH20250.1| 210|Homo sapiens COX4 neighbor protein.
Length = 210
Score = 46.0 bits (104), Expect = 6e-05
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = -1
Query: 434 SPAIXVHKYSDGKWRPRESLIVFQS--PYVLETVSHLLQKGVERDLVDFDNYLDDQSQDW 261
+P I V+++ + +WR R+ + P + LL LVDFDN+LDD DW
Sbjct: 138 APTIHVYEHHENRWRCRDPHHDYCEDWPEAQRISASLLDSRSYETLVDFDNHLDDIRNDW 197
Query: 260 TNQGIEKLV 234
TN I K V
Sbjct: 198 TNPEINKAV 206
>BC007445-1|AAH07445.1| 210|Homo sapiens COX4 neighbor protein.
Length = 210
Score = 46.0 bits (104), Expect = 6e-05
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = -1
Query: 434 SPAIXVHKYSDGKWRPRESLIVFQS--PYVLETVSHLLQKGVERDLVDFDNYLDDQSQDW 261
+P I V+++ + +WR R+ + P + LL LVDFDN+LDD DW
Sbjct: 138 APTIHVYEHHENRWRCRDPHHDYCEDWPEAQRISASLLDSRSYETLVDFDNHLDDIRNDW 197
Query: 260 TNQGIEKLV 234
TN I K V
Sbjct: 198 TNPEINKAV 206
>BC005886-1|AAH05886.1| 210|Homo sapiens COX4 neighbor protein.
Length = 210
Score = 46.0 bits (104), Expect = 6e-05
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = -1
Query: 434 SPAIXVHKYSDGKWRPRESLIVFQS--PYVLETVSHLLQKGVERDLVDFDNYLDDQSQDW 261
+P I V+++ + +WR R+ + P + LL LVDFDN+LDD DW
Sbjct: 138 APTIHVYEHHENRWRCRDPHHDYCEDWPEAQRISASLLDSRSYETLVDFDNHLDDIRNDW 197
Query: 260 TNQGIEKLV 234
TN I K V
Sbjct: 198 TNPEINKAV 206
>BC001472-1|AAH01472.1| 210|Homo sapiens COX4 neighbor protein.
Length = 210
Score = 46.0 bits (104), Expect = 6e-05
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = -1
Query: 434 SPAIXVHKYSDGKWRPRESLIVFQS--PYVLETVSHLLQKGVERDLVDFDNYLDDQSQDW 261
+P I V+++ + +WR R+ + P + LL LVDFDN+LDD DW
Sbjct: 138 APTIHVYEHHENRWRCRDPHHDYCEDWPEAQRISASLLDSRSYETLVDFDNHLDDIRNDW 197
Query: 260 TNQGIEKLV 234
TN I K V
Sbjct: 198 TNPEINKAV 206
>AF005888-1|AAB94489.1| 210|Homo sapiens COX4AL protein.
Length = 210
Score = 46.0 bits (104), Expect = 6e-05
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = -1
Query: 434 SPAIXVHKYSDGKWRPRESLIVFQS--PYVLETVSHLLQKGVERDLVDFDNYLDDQSQDW 261
+P I V+++ + +WR R+ + P + LL LVDFDN+LDD DW
Sbjct: 138 APTIHVYEHHENRWRCRDPHHDYCEDWPEAQRISASLLDSRSYETLVDFDNHLDDIRNDW 197
Query: 260 TNQGIEKLV 234
TN I K V
Sbjct: 198 TNPEINKAV 206
>BC002491-1|AAH02491.1| 208|Homo sapiens chromosome 14 open reading
frame 122 protein.
Length = 208
Score = 42.7 bits (96), Expect = 6e-04
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = -1
Query: 455 KMVQHLDSPAIXVHKYSDGKWRPRESLIVFQSPYV--LETVSHLLQKGVERDLVDFDNYL 282
K+V P + V + +W P++ +V + + V LL+ + LVDFD +L
Sbjct: 120 KLVPQPRVPPVIVLENQGLRWVPKDKNLVMWRDWEESRQMVGALLEDRAHQHLVDFDCHL 179
Query: 281 DDQSQDWTNQ 252
DD QDWTNQ
Sbjct: 180 DDIRQDWTNQ 189
>AY368908-1|AAQ83690.1| 208|Homo sapiens CGI-112 protein protein.
Length = 208
Score = 42.7 bits (96), Expect = 6e-04
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = -1
Query: 455 KMVQHLDSPAIXVHKYSDGKWRPRESLIVFQSPYV--LETVSHLLQKGVERDLVDFDNYL 282
K+V P + V + +W P++ +V + + V LL+ + LVDFD +L
Sbjct: 120 KLVPQPRVPPVIVLENQGLRWVPKDKNLVMWRDWEESRQMVGALLEDRAHQHLVDFDCHL 179
Query: 281 DDQSQDWTNQ 252
DD QDWTNQ
Sbjct: 180 DDIRQDWTNQ 189
>AF151870-1|AAD34107.1| 208|Homo sapiens CGI-112 protein protein.
Length = 208
Score = 42.7 bits (96), Expect = 6e-04
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = -1
Query: 455 KMVQHLDSPAIXVHKYSDGKWRPRESLIVFQSPYV--LETVSHLLQKGVERDLVDFDNYL 282
K+V P + V + +W P++ +V + + V LL+ + LVDFD +L
Sbjct: 120 KLVPQPRVPPVIVLENQGLRWVPKDKNLVMWRDWEESRQMVGALLEDRAHQHLVDFDCHL 179
Query: 281 DDQSQDWTNQ 252
DD QDWTNQ
Sbjct: 180 DDIRQDWTNQ 189
>U69139-1|AAB40660.1| 392|Homo sapiens zyginI protein.
Length = 392
Score = 28.7 bits (61), Expect = 10.0
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -1
Query: 293 DNYLDDQSQDWTNQGIEKLVASINASTLDDDEKE 192
DNY+ S+DW + IE L + + + + + E+E
Sbjct: 111 DNYIPSLSEDWRDPNIEALNGNCSDTEIHEKEEE 144
>U60060-1|AAC51282.1| 392|Homo sapiens FEZ1 protein.
Length = 392
Score = 28.7 bits (61), Expect = 10.0
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -1
Query: 293 DNYLDDQSQDWTNQGIEKLVASINASTLDDDEKE 192
DNY+ S+DW + IE L + + + + + E+E
Sbjct: 111 DNYIPSLSEDWRDPNIEALNGNCSDTEIHEKEEE 144
>CR541954-1|CAG46752.1| 392|Homo sapiens FEZ1 protein.
Length = 392
Score = 28.7 bits (61), Expect = 10.0
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -1
Query: 293 DNYLDDQSQDWTNQGIEKLVASINASTLDDDEKE 192
DNY+ S+DW + IE L + + + + + E+E
Sbjct: 111 DNYIPSLSEDWRDPNIEALNGNCSDTEIHEKEEE 144
>CR456817-1|CAG33098.1| 392|Homo sapiens FEZ1 protein.
Length = 392
Score = 28.7 bits (61), Expect = 10.0
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -1
Query: 293 DNYLDDQSQDWTNQGIEKLVASINASTLDDDEKE 192
DNY+ S+DW + IE L + + + + + E+E
Sbjct: 111 DNYIPSLSEDWRDPNIEALNGNCSDTEIHEKEEE 144
>BC009545-1|AAH09545.1| 392|Homo sapiens fasciculation and
elongation protein zeta 1 (zygin I) protein.
Length = 392
Score = 28.7 bits (61), Expect = 10.0
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -1
Query: 293 DNYLDDQSQDWTNQGIEKLVASINASTLDDDEKE 192
DNY+ S+DW + IE L + + + + + E+E
Sbjct: 111 DNYIPSLSEDWRDPNIEALNGNCSDTEIHEKEEE 144
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,826,428
Number of Sequences: 237096
Number of extensions: 1076505
Number of successful extensions: 6089
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 6029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6089
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3815180866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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