Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_pT_K20
         (335 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   3.0  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   3.0  
S78458-1|AAB34402.1|   46|Apis mellifera apamin protein.               21   4.0  
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    21   4.0  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    20   9.2  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 3.0
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +1

Query: 103 RHGMLPH*FKYTLLHSLL*QYVSLMSKNIYY 195
           +HGMLP    ++L +  L + +S + K  Y+
Sbjct: 87  KHGMLPRGELFSLYYPQLLREMSALFKLFYH 117


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 3.0
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +1

Query: 103 RHGMLPH*FKYTLLHSLL*QYVSLMSKNIYY 195
           +HGMLP    ++L +  L + +S + K  Y+
Sbjct: 87  KHGMLPRGELFSLYYPQLLREMSALFKLFYH 117


>S78458-1|AAB34402.1|   46|Apis mellifera apamin protein.
          Length = 46

 Score = 21.0 bits (42), Expect = 4.0
 Identities = 7/18 (38%), Positives = 8/18 (44%)
 Frame = +2

Query: 86  CNNKVPDTECCRTNSSTH 139
           CN K P+T  C      H
Sbjct: 28  CNCKAPETALCARRCQQH 45


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 21.0 bits (42), Expect = 4.0
 Identities = 6/22 (27%), Positives = 15/22 (68%)
 Frame = +2

Query: 269 LIIKNDDINCVLLXQELSQTNT 334
           +II++DD+ C ++ + +   +T
Sbjct: 21  IIIQDDDVECTMVEKRVLALST 42


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -2

Query: 301 YAINIIIFNYQSLFC 257
           + IN+ I N+  +FC
Sbjct: 90  FVINLAISNFLMMFC 104


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,168
Number of Sequences: 438
Number of extensions: 1603
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7591023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)