Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_pT_K10
(892 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC2G5.03 |||ATP binding protein|Schizosaccharomyces pombe|chr ... 254 1e-68
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 32 0.13
SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15 |Schizosac... 31 0.17
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 31 0.22
SPBC2D10.14c |myo51||myosin type V|Schizosaccharomyces pombe|chr... 31 0.29
SPAC12B10.08c |||mitochondrial tRNA|Schizosaccharomyces pombe|ch... 31 0.29
SPAC23C11.03 |||U3 snoRNP-associated protein Mpp1 |Schizosacchar... 30 0.51
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 30 0.51
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 30 0.51
SPAC26A3.09c |rga2||GTPase activating protein Rga2|Schizosacchar... 29 0.67
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 29 0.89
SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha su... 29 0.89
SPBC19C2.13c |||conserved eukaryotic protein|Schizosaccharomyces... 29 1.2
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 29 1.2
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 28 1.6
SPAC25G10.04c |rec10|rec20|meiotic recombination protein Rec10 |... 28 2.1
SPBC23G7.11 |||DNA-3-methyladenine glycosidase Mag2 |Schizosacch... 28 2.1
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 28 2.1
SPAC22A12.14c |||BSD domain protein, unknown biological role|Sch... 27 2.7
SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces pomb... 27 2.7
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 27 2.7
SPAC6B12.13 |||protein phosphatase inhibitor |Schizosaccharomyce... 27 3.6
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 27 3.6
SPCC70.03c |||proline dehydrogenase|Schizosaccharomyces pombe|ch... 27 4.7
SPAC328.02 |||Ariadne homolog|Schizosaccharomyces pombe|chr 1|||... 27 4.7
SPAPB1E7.01c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 26 6.3
SPCC895.04c |ufe1||SNARE Ufe1|Schizosaccharomyces pombe|chr 3|||... 26 6.3
SPCC553.01c ||SPCC736.01c|meiotic chromosome segregation protein... 26 8.3
SPCP1E11.03 |mug170||arrestin|Schizosaccharomyces pombe|chr 3|||... 26 8.3
SPBC14F5.08 |med7||mediator complex subunit Med7|Schizosaccharom... 26 8.3
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 26 8.3
SPBP8B7.23 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 26 8.3
>SPBC2G5.03 |||ATP binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 335
Score = 254 bits (622), Expect = 1e-68
Identities = 118/188 (62%), Positives = 143/188 (76%), Gaps = 3/188 (1%)
Frame = -1
Query: 892 KNNCTFCGVFRRPAXDRGAAMLNVKCIATGHNADDIAETVLMNVLRGDIARLKRCTAITT 713
KNNCT+CGVFRR A DR A L++ + TGHNADDIAET+LMN+LRGD+ARL R T ITT
Sbjct: 139 KNNCTYCGVFRRQALDRAALSLDIHHLVTGHNADDIAETILMNLLRGDVARLPRSTEITT 198
Query: 712 GSEGT-IPRVKPLKYTYEKEIVMYAHYKKLVYFSTECVFAPNAYRGHARALLKDMEKIRP 536
S+ + R KP KY+YEKEIV+YAHYKKL YFSTEC ++P A+RG ARA++K +E IRP
Sbjct: 199 QSDSSPTKRSKPFKYSYEKEIVLYAHYKKLDYFSTECTYSPEAFRGTARAMIKQLENIRP 258
Query: 535 SCIMDIIYSGETMSIKEEV--SLPTQRLCIRCNFVSSQEVCKACVLLEGLNKGLPKLGIG 362
S I+DIIYSGE+M + V LP Q C RC F+SS +CKAC+LLEGLNKG+ LG+G
Sbjct: 259 SSILDIIYSGESMQLASSVQEQLPQQTTCERCGFISSNRICKACMLLEGLNKGITGLGLG 318
Query: 361 KSSKVKKL 338
K KKL
Sbjct: 319 SDRKTKKL 326
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 31.9 bits (69), Expect = 0.13
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Frame = -1
Query: 271 ITDKKTSKTCKNISNGFKQKECNATNCCTNKTERNVEKNNEK----LQTVLDKYSLENNS 104
I +KK S + + + + E +++ + + E VEK EK ++ D S ++S
Sbjct: 156 IEEKKESSSDSSSESSSSESESESSSSESEEEEEVVEKTEEKKEGSSESSSDSESSSDSS 215
Query: 103 QVKLDEEDSDDSEIKHQDEDD 41
D + S DSE + ED+
Sbjct: 216 SESGDSDSSSDSESESSSEDE 236
>SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 265
Score = 31.5 bits (68), Expect = 0.17
Identities = 12/47 (25%), Positives = 28/47 (59%)
Frame = -1
Query: 178 TERNVEKNNEKLQTVLDKYSLENNSQVKLDEEDSDDSEIKHQDEDDT 38
++ +V+ +N+ + + + E+NSQ +D +S+ S+ + ED+T
Sbjct: 121 SDDSVDSSNKNSEVSIKRRKTESNSQESVDSSNSESSDEESDSEDET 167
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 31.1 bits (67), Expect = 0.22
Identities = 34/128 (26%), Positives = 52/128 (40%), Gaps = 14/128 (10%)
Frame = -1
Query: 367 IGKSSKVKKLLDEYNTRQNNLETAVKDLEDCNITDKKTSKTCKNISNGFKQKECNATNCC 188
I SKV L+ + ++TA L++ D K KN+ + QKE
Sbjct: 4 ISMKSKVCPLIYHFLQENGYVKTAQTFLKETGDKDLAKGKVKKNLLDLLSQKEFLPYLTT 63
Query: 187 TN-----KTERNVEKNNEKLQTVLDK---------YSLENNSQVKLDEEDSDDSEIKHQD 50
+ KT+ ++EK+N+ Q + K S + S DE DS SE +
Sbjct: 64 EDVGKHKKTKESLEKSNDDSQKISKKGAPPEKAHSSSEASGSGSSSDESDSSSSESESSS 123
Query: 49 EDDTCSRS 26
ED+ S S
Sbjct: 124 EDNDSSSS 131
Score = 27.5 bits (58), Expect = 2.7
Identities = 16/81 (19%), Positives = 36/81 (44%)
Frame = -1
Query: 268 TDKKTSKTCKNISNGFKQKECNATNCCTNKTERNVEKNNEKLQTVLDKYSLENNSQVKLD 89
++ ++S + S+ E +++ + + + + +E D S ++S+ +
Sbjct: 207 SESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESS 266
Query: 88 EEDSDDSEIKHQDEDDTCSRS 26
+DSD S EDD+ S S
Sbjct: 267 SKDSDSSSNSSDSEDDSSSDS 287
>SPBC2D10.14c |myo51||myosin type V|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1471
Score = 30.7 bits (66), Expect = 0.29
Identities = 37/166 (22%), Positives = 71/166 (42%), Gaps = 5/166 (3%)
Frame = -1
Query: 667 YEKEIVMYAHYKKLVYFSTECVFAPNAYR-GHARALLKDMEKIRPSCIMD-IIYSGETMS 494
YEK +V K+ + S+ +F Y+ G R L D + + +++ +I++G ++
Sbjct: 1079 YEKRVVFLKQIKQALTVSS--LFNAVGYKDGVMRLLETDQNSLLFAGVVNFLIFAGISLD 1136
Query: 493 IKEEVSLPTQRLCIRCNFVSSQEVCKACVLLEGLNKGLPKL--GIGKSSKVKKLLDEY-N 323
+K ++S +LC + V + L+ K L + K++ L +
Sbjct: 1137 LKTQISEFLSQLCSYFTKIVDGTVIENDKTLDFYEKPLQAVLYWFATLHKIRSFLVHLLS 1196
Query: 322 TRQNNLETAVKDLEDCNITDKKTSKTCKNISNGFKQKECNATNCCT 185
+ ++ V+DL + I K SK N+ N F +CCT
Sbjct: 1197 INSHGKQSVVEDLWNPLIL--KFSKHFSNLENSFHSLVQKLLSCCT 1240
>SPAC12B10.08c |||mitochondrial tRNA|Schizosaccharomyces pombe|chr
1|||Manual
Length = 456
Score = 30.7 bits (66), Expect = 0.29
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -1
Query: 826 NVKCIATGHNADDIAETVLMNVLR 755
N++ I T H+A+D AET+ M +LR
Sbjct: 124 NIRHICTAHHANDQAETIFMRLLR 147
>SPAC23C11.03 |||U3 snoRNP-associated protein Mpp1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 598
Score = 29.9 bits (64), Expect = 0.51
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -1
Query: 127 KYSLENNSQVKLDEEDSDDSEI-KHQDEDDTCS 32
KY+L++ QV ++ ED ++ I QDEDD S
Sbjct: 64 KYALDDLPQVDVENEDEEEDSITSFQDEDDETS 96
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 29.9 bits (64), Expect = 0.51
Identities = 28/128 (21%), Positives = 56/128 (43%), Gaps = 6/128 (4%)
Frame = -1
Query: 430 QEVCKACVLLEGLNKGLPKLGIGKSSKVKKLLDEYNTRQNNLETAVKDLEDCNITDKKTS 251
+E+ K C LE + L + + + N+ +E K++E N + + +
Sbjct: 1355 EELKKNCEALEKEKQELETKLQETAKETDTFKQQVNSLNEEVENLKKEVEQANTKNTRLA 1414
Query: 250 ----KTCKNISNGFKQKECNATNCCTNKTERNVEKN--NEKLQTVLDKYSLENNSQVKLD 89
+ C+N+ + + TNK + KN NE +Q ++ SL++++ +L
Sbjct: 1415 AAWNEKCENLKKSSLTRFAHLKQELTNKNKELTSKNAENEAMQKEIE--SLKDSNH-QLQ 1471
Query: 88 EEDSDDSE 65
E S D+E
Sbjct: 1472 ESASSDAE 1479
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 29.9 bits (64), Expect = 0.51
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Frame = -1
Query: 346 KKLLDEYNTRQNNLETAVKDLEDCNITDKKTSKTCKNISNGFKQKE---CNATNCCTNKT 176
KKL + + +NN +T K L+D T K + +N F+QKE + N K
Sbjct: 612 KKLNESHQELENNHQTITKQLKD---TSSKLQQLQLERAN-FEQKESTLSDENNDLRTKL 667
Query: 175 ERNVEKNNEKLQTVLDKYSLENNSQ-VKLDEEDSDDS 68
+ E N ++ D SLE N Q +K D S+++
Sbjct: 668 LKLEESNKSLIKKQEDVDSLEKNIQTLKEDLRKSEEA 704
>SPAC26A3.09c |rga2||GTPase activating protein
Rga2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1275
Score = 29.5 bits (63), Expect = 0.67
Identities = 15/30 (50%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Frame = -1
Query: 133 LDKYS-LENNSQVKLDEEDSDDSEIKHQDE 47
L+KYS +E NS++ DEE+ D+S I Q+E
Sbjct: 53 LEKYSKIELNSEIWEDEEEEDNSGIVSQNE 82
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 29.1 bits (62), Expect = 0.89
Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 2/119 (1%)
Frame = -1
Query: 403 LEGLNKGLPKLGIGKSSKVKKLLDEYNTRQNNLETAVKDLEDCNITDKKTSKTCKNISNG 224
L+ +N L + K+SKV+ LL E N + L KDL D T + +N +
Sbjct: 913 LKQINNELESELLEKTSKVETLLSEQNELKEKLSLEEKDLLD---TKGELESLRENNATV 969
Query: 223 FKQKECNATNCCTNKTERNVEKNNE--KLQTVLDKYSLENNSQVKLDEEDSDDSEIKHQ 53
+K C + E V K+ E KL + Y E +++L + ++ I+ +
Sbjct: 970 LSEK-AEFNEQCKSLQETIVTKDAELDKLTKYISDYKTE-IQEMRLTNQKMNEKSIQQE 1026
>SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha
subunit Tfa1 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 448
Score = 29.1 bits (62), Expect = 0.89
Identities = 20/90 (22%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Frame = -1
Query: 295 VKDLEDCNITDKKTSKTCKNISNGF-----KQKECNATNCCTNKTERNVEKNNEKLQTVL 131
V D ED + D T+ + +N S + K + N+ + NK +++E+NN V
Sbjct: 350 VDDEEDDDFLDVTTATSLQNKSTDYGSVKRKTENLNSDSDIQNKRTKSIEENNSLPPIVS 409
Query: 130 DKYSLENNSQVKLDEEDSDDSEIKHQDEDD 41
+ +++++ +++ + DEDD
Sbjct: 410 TNGITDGDTEMQESKKNVIINGFNEDDEDD 439
>SPBC19C2.13c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 366
Score = 28.7 bits (61), Expect = 1.2
Identities = 29/139 (20%), Positives = 51/139 (36%), Gaps = 1/139 (0%)
Frame = -1
Query: 838 AAMLNVKCIATGHNADDIAETVLMNVLRGDIARLKRCTAITTGSEGTIP-RVKPLKYTYE 662
A N I G + IA VL V G + T++ + ++PL+
Sbjct: 184 ARKANCDTIVFGDSGTTIAARVLELVAEGRGFAIPWYTSVCSKLPNCDTFLLRPLREVLS 243
Query: 661 KEIVMYAHYKKLVYFSTECVFAPNAYRGHARALLKDMEKIRPSCIMDIIYSGETMSIKEE 482
++ Y + K L + + PN G + + PS + ++ MS K
Sbjct: 244 SDLKSYMNIKGLAFCDSLIEARPNTIHGVTESYFSSLNDTFPSLVSTVV----KMSSKLH 299
Query: 481 VSLPTQRLCIRCNFVSSQE 425
V T+ +C CN ++
Sbjct: 300 VP-STEAICTICNLPMQED 317
>SPAC23C4.19 |spt5||transcription elongation factor
Spt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 990
Score = 28.7 bits (61), Expect = 1.2
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = -1
Query: 184 NKTERNVEKNNEKLQTVLDKYSLENNSQVKLDEEDSDDSEIKHQDEDDTCSRSCGR 17
N+ E + NN+K + D EN + +EE+ +D E +DE+D GR
Sbjct: 81 NENEVDNVNNNDKKEDE-DNVE-ENEEEADANEEEEEDEEDDEEDEEDEDESGGGR 134
Score = 26.2 bits (55), Expect = 6.3
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = -1
Query: 229 NGFKQKECNATNCCTNKTERNVEKNNEKLQTVLDKYSLENNSQVKLDEEDSDDS 68
+G + + N N + E NVE+N E+ ++ E+ + DEED D+S
Sbjct: 79 DGNENEVDNVNNNDKKEDEDNVEENEEEADA--NEEEEEDEEDDEEDEEDEDES 130
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = -1
Query: 316 QNNLETAVKDLEDCNITDKKTSKTCKNISNGF-KQKECN-ATNCCTNKTERNVEKNNE 149
+N +T +K+LED + K+ KN+ N KQ+ N N +++ +VE N++
Sbjct: 639 KNENQTLLKNLEDSTARYEHLQKSFKNVFNQLRKQQPSNHGRNSSVSRSSSSVEVNSK 696
>SPAC25G10.04c |rec10|rec20|meiotic recombination protein Rec10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 791
Score = 27.9 bits (59), Expect = 2.1
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = -1
Query: 325 NTRQNNLETAVKDLEDCNITDKKTSKTCKNISNG--FKQKECNATNCCTNKTERNVEKNN 152
N+RQ +L T VK NIT TC + N F KE ++++ + +E N
Sbjct: 623 NSRQIDLSTFVKQANTPNIT-SLLDGTCSSPPNNECFNDKEPDSSSSTLISDRQELEYRN 681
Query: 151 EKLQTV 134
+TV
Sbjct: 682 PNAETV 687
>SPBC23G7.11 |||DNA-3-methyladenine glycosidase Mag2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 213
Score = 27.9 bits (59), Expect = 2.1
Identities = 22/100 (22%), Positives = 51/100 (51%), Gaps = 3/100 (3%)
Frame = -1
Query: 334 DEYNTRQNNLETAVKDLEDCNITDKKTSKTCKNISNGFKQKECNATNCCTNKTERNVEKN 155
DE+ T + +ET V+ L +C + K S+ ++ K+ + + +E + ++
Sbjct: 74 DEFPTPKQIMETDVETLHECGFS-KLKSQEIHIVAEAALNKQIPSKSEIEKMSEEELMES 132
Query: 154 NEKLQTVLDKYSLENNSQV---KLDEEDSDDSEIKHQDED 44
K++ V ++++E S +LD +DDS +K++ ++
Sbjct: 133 LSKIKGV-KRWTIEMYSIFTLGRLDIMPADDSTLKNEAKE 171
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 27.9 bits (59), Expect = 2.1
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = -1
Query: 361 KSSKVKKLLDEYNTRQNNLETAV--KDLEDCNI 269
KSS+V LL YNT +LE A+ KD E N+
Sbjct: 579 KSSEVSNLLSRYNTEVAHLEDALHSKDRELANL 611
>SPAC22A12.14c |||BSD domain protein, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 347
Score = 27.5 bits (58), Expect = 2.7
Identities = 27/108 (25%), Positives = 51/108 (47%), Gaps = 8/108 (7%)
Frame = -1
Query: 364 GKSSKVKKLLDEYNTRQNNLETAV------KDLEDCNITDKKTSKTCKNISNGFKQKECN 203
GK+ ++ LL+EY + +E+ V D K+ + K I +G ++E
Sbjct: 175 GKTEEISLLLEEYPDLRKQMESLVPSEVSYDDFWKRFFWHKEVVQPIKAIQSGNDEEEIF 234
Query: 202 ATNCCTNKTER--NVEKNNEKLQTVLDKYSLENNSQVKLDEEDSDDSE 65
+ + E N + N+EK Q+ ++ + ENNS ++ +E +D E
Sbjct: 235 SWGDERSDEEESDNEQVNDEKKQS-SEEDTTENNSAAEVIDETVNDLE 281
>SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 631
Score = 27.5 bits (58), Expect = 2.7
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -1
Query: 139 TVLDKYSLENNSQVKLDEEDSDDSEIKHQDED 44
T+ D+Y NN + K E + +++K+QDED
Sbjct: 253 TLTDQYLFPNNVETKRFIEKALTNKVKNQDED 284
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 27.5 bits (58), Expect = 2.7
Identities = 22/68 (32%), Positives = 39/68 (57%)
Frame = -1
Query: 259 KTSKTCKNISNGFKQKECNATNCCTNKTERNVEKNNEKLQTVLDKYSLENNSQVKLDEED 80
K SKT +N+S+ F +K N ++ K+ E++ T +K+ E S++ L+EE+
Sbjct: 688 KHSKTIENVSSNFSKKNRNVV------VSESLTKSMEEVLTP-EKF-YERLSKL-LEEEN 738
Query: 79 SDDSEIKH 56
SD E+K+
Sbjct: 739 SDLGELKN 746
>SPAC6B12.13 |||protein phosphatase inhibitor |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 104
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = -1
Query: 157 NNEKLQTVLDKYSLENNSQVKLDEEDSDDSEIKHQDEDDTCSRSCGR 17
+NE + K + Q K DE SD D D +CS C R
Sbjct: 54 DNEHMNKKKSKVCCIFHKQRKFDESSSDSDS--DSDSDSSCSSCCSR 98
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 27.1 bits (57), Expect = 3.6
Identities = 24/92 (26%), Positives = 40/92 (43%)
Frame = -1
Query: 418 KACVLLEGLNKGLPKLGIGKSSKVKKLLDEYNTRQNNLETAVKDLEDCNITDKKTSKTCK 239
K L E +N G KL + K+ L + T K+L+ T K + + K
Sbjct: 863 KCSNLQEKINFG-NKLAKEHTEKISSLEKDLEAATKTASTLSKELK----TVKSENDSLK 917
Query: 238 NISNGFKQKECNATNCCTNKTERNVEKNNEKL 143
++SN + KE + N + + + + NEKL
Sbjct: 918 SVSNDDQNKEKSVNNEKFKEVSQALAEANEKL 949
Score = 26.2 bits (55), Expect = 6.3
Identities = 27/87 (31%), Positives = 40/87 (45%)
Frame = -1
Query: 343 KLLDEYNTRQNNLETAVKDLEDCNITDKKTSKTCKNISNGFKQKECNATNCCTNKTERNV 164
KL E+ + ++LE KDLE T SK K + + + + +N NK E++V
Sbjct: 876 KLAKEHTEKISSLE---KDLEAATKTASTLSKELKTVKSENDSLK-SVSNDDQNK-EKSV 930
Query: 163 EKNNEKLQTVLDKYSLENNSQVKLDEE 83
NNEK + V + N DEE
Sbjct: 931 --NNEKFKEVSQALAEANEKLNARDEE 955
>SPCC70.03c |||proline dehydrogenase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 492
Score = 26.6 bits (56), Expect = 4.7
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -3
Query: 593 ECLQRTCTRLAQGYGKDKAVMHNGYYLF 510
+C+ L + Y K+ A++HN Y L+
Sbjct: 275 DCMHAVTVDLMRKYNKEVAIVHNTYQLY 302
>SPAC328.02 |||Ariadne homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 504
Score = 26.6 bits (56), Expect = 4.7
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = -1
Query: 124 YSLENNSQVKLDEEDSDDSEIKHQDEDDTCSRSC 23
Y L N+Q ++ E++ D E+ ++ + C R C
Sbjct: 426 YYLARNNQTEIFEDNQRDLELAVENLSELCERPC 459
>SPAPB1E7.01c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 163
Score = 26.2 bits (55), Expect = 6.3
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -1
Query: 160 KNNEKLQTVLDKYSLENNSQVKLDEEDSDDSEIK 59
KN++ L+ L+K E N Q ++D DDS+ +
Sbjct: 104 KNHDNLKRKLNKVGDELNEQQSDTDDDDDDSKAR 137
>SPCC895.04c |ufe1||SNARE Ufe1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 319
Score = 26.2 bits (55), Expect = 6.3
Identities = 24/98 (24%), Positives = 41/98 (41%), Gaps = 6/98 (6%)
Frame = -1
Query: 289 DLEDCNITDKKTSKTCKNISNGFKQKECNATNCCTNKTERNVE------KNNEKLQTVLD 128
D++ NI K+ S T ++ G++ E K R N ++L L
Sbjct: 16 DIDAANIPLKRISYTDPFLAEGYRIHETIVNLLVFLKKIRGAYLKDRTFSNVQRLSKPLM 75
Query: 127 KYSLENNSQVKLDEEDSDDSEIKHQDEDDTCSRSCGRL 14
+ SLE S+++LDE D+ E + +C +L
Sbjct: 76 ECSLEELSKLELDEVQRDEIEHEVSSAISSCIHQIAKL 113
>SPCC553.01c ||SPCC736.01c|meiotic chromosome segregation
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 715
Score = 25.8 bits (54), Expect = 8.3
Identities = 24/73 (32%), Positives = 34/73 (46%)
Frame = +3
Query: 288 SLTAVSKLFCLVLYSSSNFFTLELLPIPSFGNPLFKPSSKTHALHTSCDDTKLHLMHNLW 467
SL + S L L L + F ++ +PSF +PL KP+S + + S L N
Sbjct: 425 SLDSSSLLTPLALPNKKAFQPVKFR-VPSFSSPLVKPASSS-SFGRSHSHLGTSLRSNEL 482
Query: 468 VGSDTSSFIDIVS 506
GS SS I + S
Sbjct: 483 NGSSASSSIFLQS 495
>SPCP1E11.03 |mug170||arrestin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 426
Score = 25.8 bits (54), Expect = 8.3
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 304 ETAVKDLEDCNITDKKTSKTCKNISNGF 221
E + E C+++D TSKT +I N F
Sbjct: 3 EELFSNSETCSLSDPLTSKTLSSIENPF 30
>SPBC14F5.08 |med7||mediator complex subunit
Med7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = -1
Query: 313 NNLETAVKDLEDCNITDKKTSKTCKNISNGFKQKEC 206
+N+E K +D N KT + ++++ FK+ C
Sbjct: 33 SNMEKEAKHEDDANTLQPKTEEEIESLAKLFKKPSC 68
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 25.8 bits (54), Expect = 8.3
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = -1
Query: 187 TNKTERNVEKNNEKLQTVLDKYSLENNSQVKLDEEDSDDSEIKHQDEDDT 38
+++ ER+ EK + K + EN++ + D+ D DD + D D+T
Sbjct: 1463 SHRPERSSEKKSPSPVFTSVKQTAENDADNEDDKTDMDDQTEETLDADNT 1512
>SPBP8B7.23 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 673
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -1
Query: 163 EKNNEKLQTVLDKYSLENNSQVKLDEED 80
E+N + LQT +D L++NS +L E D
Sbjct: 404 EQNIKSLQTDIDNLCLQSNSLKQLSEVD 431
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,557,455
Number of Sequences: 5004
Number of extensions: 76334
Number of successful extensions: 389
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 348
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 378
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 448490560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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