Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_pT_K05
(929 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 250 3e-67
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 246 5e-66
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 201 1e-52
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 186 4e-48
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 185 9e-48
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 175 6e-45
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 77 5e-15
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 67 3e-12
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 65 1e-11
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 64 3e-11
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 64 4e-11
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 63 5e-11
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 61 2e-10
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 58 2e-09
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 57 3e-09
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 52 1e-07
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 49 1e-06
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 29 0.71
SPAC6B12.12 |tom70||mitochondrial TOM complex subunit Tom70|Schi... 27 3.8
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22... 27 5.0
SPBC27B12.03c |||lathosterol oxidase |Schizosaccharomyces pombe|... 26 8.7
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 250 bits (611), Expect = 3e-67
Identities = 121/177 (68%), Positives = 140/177 (79%), Gaps = 9/177 (5%)
Frame = -2
Query: 928 FSKDQFPEVYXPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCF 749
FSK FPEVY PTVFENYVAD+EVDG+ VELALWDTAGQEDYDRLRPLSYPD+ VIL+CF
Sbjct: 26 FSKGTFPEVYVPTVFENYVADVEVDGRHVELALWDTAGQEDYDRLRPLSYPDSHVILICF 85
Query: 748 SVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPATINELRKMKQEPVKPQEG 569
+VDSPDSL+N+ EKW EV HFC ++PI+LV K DLRNDP I EL K Q PV +EG
Sbjct: 86 AVDSPDSLDNVQEKWISEVLHFCSSLPILLVACKADLRNDPKIIEELSKTNQHPVTTEEG 145
Query: 568 RAMAEKINAFAYLECSAKSKEGVREVFETATRAAL-----QVK----KKKKTRCSLL 425
+A+A+KI A+ YLECSAK+ EGVREVFE+ATRAA+ +VK KKK RC LL
Sbjct: 146 QAVAQKIGAYKYLECSAKTNEGVREVFESATRAAMLKHKPKVKPSSGTKKKKRCILL 202
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 246 bits (601), Expect = 5e-66
Identities = 115/175 (65%), Positives = 136/175 (77%), Gaps = 7/175 (4%)
Frame = -2
Query: 928 FSKDQFPEVYXPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCF 749
FSK FPEVY PTVFENYVAD+EVDG+ +ELALWDTAGQEDYDRLRPLSYPD+ V+L+CF
Sbjct: 26 FSKGTFPEVYVPTVFENYVADVEVDGRHIELALWDTAGQEDYDRLRPLSYPDSHVVLICF 85
Query: 748 SVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPATINELRKMKQEPVKPQEG 569
SVD+P+SL+N+ EKW EV HFC N+PI+LVG K DLRNDP TI EL K Q+P+ +EG
Sbjct: 86 SVDAPESLDNVQEKWISEVLHFCSNLPILLVGCKVDLRNDPKTIEELSKTSQKPITFEEG 145
Query: 568 RAMAEKINAFAYLECSAKSKEGVREVFETATRAAL-------QVKKKKKTRCSLL 425
+ +A+KI A+ YLECSAK EGV EVFETA RA++ K KKK C LL
Sbjct: 146 QVVAQKIGAYKYLECSAKLNEGVNEVFETAARASMLKFKPASVPKTKKKKHCILL 200
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 201 bits (490), Expect = 1e-52
Identities = 93/172 (54%), Positives = 121/172 (70%), Gaps = 4/172 (2%)
Frame = -2
Query: 928 FSKDQFPEVYXPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCF 749
F+ FP Y PTVFENYV+D VDGK V+LALWDTAGQE+Y+RLRP+SY +IL+ F
Sbjct: 28 FTLGYFPTEYVPTVFENYVSDCRVDGKSVQLALWDTAGQEEYERLRPMSYAKAHIILVGF 87
Query: 748 SVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPATINELRKMKQEPVKPQEG 569
++DSPDSLEN+ KW E+ CPNVP ILVG K DLR+DP I E+R+ Q VK Q+
Sbjct: 88 AIDSPDSLENVSTKWIEEINTLCPNVPFILVGMKADLRSDPVAIEEMRRRNQNFVKSQQA 147
Query: 568 RAMAEKINAFAYLECSAKSKEGVREVFETATRAALQVK----KKKKTRCSLL 425
+A++I A Y+ECS+ + +GV +VFE ATRAAL V+ K T+C ++
Sbjct: 148 ELVAQRIGARKYMECSSLTGDGVDDVFEAATRAALTVRDSENDKSSTKCCII 199
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 186 bits (453), Expect = 4e-48
Identities = 94/173 (54%), Positives = 115/173 (66%), Gaps = 5/173 (2%)
Frame = -2
Query: 928 FSKDQFPEVYXPTVFENYVADIEV--DGKQVELALWDTAGQEDYDRLRPLSYPDTDVILM 755
FS FPE Y PTVFENY+ DI + K +ELALWDTAGQE+YDRLRPLSYP+++VIL+
Sbjct: 34 FSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQEEYDRLRPLSYPNSNVILL 93
Query: 754 CFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPATINELRKMKQEPVKPQ 575
CFS+D P SL N+ EKW PEV+HFCP PI+LVG K DLR D LR PV Q
Sbjct: 94 CFSIDCPASLNNVTEKWYPEVQHFCPRTPIVLVGLKADLRKDRNATEVLRTQGLTPVTYQ 153
Query: 574 EGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKK---KKTRCSLL 425
+ +++A +NA Y+ECSAK GV EVF+ A L +KK K C +L
Sbjct: 154 QAQSVALSMNA-PYVECSAKENTGVNEVFQLA--VGLTIKKSFSFSKKSCVIL 203
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 185 bits (450), Expect = 9e-48
Identities = 83/170 (48%), Positives = 117/170 (68%), Gaps = 2/170 (1%)
Frame = -2
Query: 928 FSKDQFPEVYXPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCF 749
++ ++FP Y PTVF+NY + + + L L+DTAGQEDYDRLRPLSYP TDV L+CF
Sbjct: 23 YTTNKFPSDYVPTVFDNYAVTVMIGDEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCF 82
Query: 748 SVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPATINELRKMKQEPVKPQEG 569
SV SP S EN+ EKW PEV H CP VP ++VG + DLR+DP+ +L + Q P+ ++G
Sbjct: 83 SVTSPASFENVKEKWFPEVHHHCPGVPCLIVGTQIDLRDDPSVQQKLARQHQHPLTHEQG 142
Query: 568 RAMAEKINAFAYLECSAKSKEGVREVFETATRAALQ--VKKKKKTRCSLL 425
+A ++ A Y+ECSA +++G++ VF+ A AAL V KKK++C +L
Sbjct: 143 ERLARELGAVKYVECSALTQKGLKNVFDEAIVAALDPPVPHKKKSKCLVL 192
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 175 bits (427), Expect = 6e-45
Identities = 86/160 (53%), Positives = 108/160 (67%)
Frame = -2
Query: 928 FSKDQFPEVYXPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCF 749
F+K FP+VY PT+FENY+ DI VDG +EL+LWDTAGQE+YD+LR LSY DT VI++CF
Sbjct: 33 FTKGYFPQVYEPTIFENYIHDIFVDGNSIELSLWDTAGQEEYDQLRSLSYSDTHVIMICF 92
Query: 748 SVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPATINELRKMKQEPVKPQEG 569
+VDS DSLEN+ KW PEV CP V ++LV K DLR +E + + + +EG
Sbjct: 93 AVDSRDSLENVITKWLPEVSSNCPGVKLVLVALKCDLRG----ADEEQVDHSKIIDYEEG 148
Query: 568 RAMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKK 449
A A+KINA YLECSAK GV E F A R AL + +
Sbjct: 149 LAAAKKINAVRYLECSAKLNRGVNEAFTEAARVALAAQPR 188
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 76.6 bits (180), Expect = 5e-15
Identities = 51/162 (31%), Positives = 85/162 (52%), Gaps = 1/162 (0%)
Frame = -2
Query: 928 FSKDQFPEVYXPTVFENY-VADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMC 752
FS+D F + T+ ++ + IE+DGK+++L +WDTAGQE + + Y IL+
Sbjct: 29 FSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLL 88
Query: 751 FSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPATINELRKMKQEPVKPQE 572
+ V S +N+ ++ +H NV IL+GNK D + Q V ++
Sbjct: 89 YDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCDCED------------QRQVSFEQ 136
Query: 571 GRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKKK 446
G+A+A+++ +LE SAK+ V E F T R ++KK+K
Sbjct: 137 GQALADELGV-KFLEASAKTNVNVDEAFFTLAR---EIKKQK 174
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 67.3 bits (157), Expect = 3e-12
Identities = 46/162 (28%), Positives = 81/162 (50%), Gaps = 2/162 (1%)
Frame = -2
Query: 928 FSKDQFPEVYXPTVFENY-VADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMC 752
F+ D + E Y T+ ++ + E++GK V+L +WDTAGQE + + Y I++
Sbjct: 28 FADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIV 87
Query: 751 FSVDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNKKDLRNDPATINELRKMKQEPVKPQ 575
+ V DS N+ ++W E+ + V +LVGNK D+ + ++ V+
Sbjct: 88 YDVTDQDSFNNV-KQWLQEIDRYAVEGVNRLLVGNKSDM------------VDKKVVEYS 134
Query: 574 EGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKK 449
+ A+ +N +LE SAK V + F T +R Q+K++
Sbjct: 135 VAKEFADSLN-IPFLETSAKDSTNVEQAFLTMSR---QIKER 172
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 65.3 bits (152), Expect = 1e-11
Identities = 49/163 (30%), Positives = 78/163 (47%), Gaps = 3/163 (1%)
Frame = -2
Query: 928 FSKDQFPEVYXPTVFENYVAD-IEVD-GKQVELALWDTAGQEDYDRLRPLSYPDTDVILM 755
F KDQF + T+ ++ + +D V+L +WDTAGQE Y L P+ Y + + ++
Sbjct: 34 FVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQERYKSLAPMYYRNANCAIV 93
Query: 754 CFSVDSPDSLENIPEKWTPEVKHFCP-NVPIILVGNKKDLRNDPATINELRKMKQEPVKP 578
+ + SLE + W E++ P + I L GNK DL + + V+
Sbjct: 94 VYDITQAASLEK-AKSWIKELQRQAPEGIVIALAGNKLDLAQE-----------RRAVEK 141
Query: 577 QEGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKK 449
+ A A + N + E SAK+ E V E+F TA L ++ K
Sbjct: 142 ADAEAYAAEAN-LLFFETSAKTAENVNELF-TAIAKKLPLEDK 182
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 64.1 bits (149), Expect = 3e-11
Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 5/161 (3%)
Frame = -2
Query: 928 FSKDQFPEVYXPTVFENYVA-DIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMC 752
F +F Y T+ +++ D+ VD K V L LWDTAGQE + L Y D ++
Sbjct: 28 FVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQERFQSLGMAFYRGADCCVIV 87
Query: 751 FSVDSPDSLENIPEKWTPEVKHFCPN----VPIILVGNKKDLRNDPATINELRKMKQEPV 584
++V++ S +++ E W E + P I+VGN+ D ++ R + +
Sbjct: 88 YNVNNSKSFDSV-ENWRQEFLYQTSQDECAFPFIIVGNQIDKDASKRAVSLHRAL--DYC 144
Query: 583 KPQEGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQ 461
K + G M + E SAK V ++FET +R AL+
Sbjct: 145 KSKHGSNM-------IHFEASAKENTNVTDLFETVSRLALE 178
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 63.7 bits (148), Expect = 4e-11
Identities = 48/158 (30%), Positives = 75/158 (47%), Gaps = 6/158 (3%)
Frame = -2
Query: 916 QFPEVYXPTVFENYVA-DIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVD 740
+F + Y T+ +++ ++ VD K V L LWDTAGQE + L Y D ++ + V+
Sbjct: 32 KFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQERFQSLGVAFYRGADCCVLVYDVN 91
Query: 739 SPDSLENIPEKWTPE-VKHFCPN----VPIILVGNKKDLRNDPATINELRKMKQEPVKPQ 575
+ S E + + W E + P+ P IL+GNK D + E ++M V
Sbjct: 92 NSKSFETL-DSWRDEFLIQASPSNPETFPFILLGNKVD-------VEEQKRM----VSKS 139
Query: 574 EGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQ 461
+ A + Y E SAK V+E FET + AL+
Sbjct: 140 KALAFCQARGEIPYFETSAKEAINVQEAFETVAKLALE 177
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 63.3 bits (147), Expect = 5e-11
Identities = 47/149 (31%), Positives = 79/149 (53%), Gaps = 2/149 (1%)
Frame = -2
Query: 928 FSKDQFPEVYXPTVFENYVAD-IEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMC 752
F DQF Y T+ ++++ + ++ + V L LWDTAGQE + L P D+ V ++
Sbjct: 31 FMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAIIV 90
Query: 751 FSVDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLRNDPATINELRKMKQEPVKPQ 575
+ + + +S N EKW +V+ +V I+LVGNK DL + R++ QE
Sbjct: 91 YDITNHNSFVN-TEKWIEDVRAERGDDVIIVLVGNKTDLA-------DKRQVTQE----- 137
Query: 574 EGRAMAEKINAFAYLECSAKSKEGVREVF 488
EG A+++ ++E SAK+ V+ +F
Sbjct: 138 EGEKKAKELK-IMHMETSAKAGHNVKLLF 165
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 60.9 bits (141), Expect = 2e-10
Identities = 42/151 (27%), Positives = 73/151 (48%), Gaps = 2/151 (1%)
Frame = -2
Query: 928 FSKDQFPEVYXPTVFENYVA-DIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMC 752
F++++F T+ + +I +D K+++ +WDTAGQE Y + Y L+
Sbjct: 30 FTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQERYRAITSAYYRGAVGALIV 89
Query: 751 FSVDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLRNDPATINELRKMKQEPVKPQ 575
+ + S +N+ +W E++ H N+ I+LVGNK DL + V +
Sbjct: 90 YDITKQSSFDNV-GRWLKELREHADSNIVIMLVGNKTDL------------LHLRAVSTE 136
Query: 574 EGRAMAEKINAFAYLECSAKSKEGVREVFET 482
E +A A + N +++E SA V E F+T
Sbjct: 137 EAQAFAAE-NNLSFIETSAMDASNVEEAFQT 166
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 58.0 bits (134), Expect = 2e-09
Identities = 42/161 (26%), Positives = 74/161 (45%), Gaps = 1/161 (0%)
Frame = -2
Query: 922 KDQFPEVYXPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSV 743
+ F + Y PT+ ++Y E+DG+ L + DTAGQE+Y +R + L+ +++
Sbjct: 30 QSHFVDEYDPTIEDSYRKKCEIDGEGALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYNI 89
Query: 742 DSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLRNDPATINELRKMKQEPVKPQEGR 566
S S + I + ++ P++LV NK DL + V EG
Sbjct: 90 TSRSSFDEISTFYQQILRVKDKDTFPVVLVANKCDLE------------AERVVSRAEGE 137
Query: 565 AMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKKKK 443
+A+ ++ Y+E SAK + V E F + R + K ++
Sbjct: 138 QLAKSMHCL-YVETSAKLRLNVEEAFYSLVRTIRRYNKSEE 177
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 57.2 bits (132), Expect = 3e-09
Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 1/149 (0%)
Frame = -2
Query: 928 FSKDQFPEVYXPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCF 749
+ ++ F E Y PT+ + +I+ G++ + DTAGQ++Y L ++ +
Sbjct: 26 YVENHFVESYYPTIENTFSKNIKYKGQEFATEIIDTAGQDEYSILNSKHSIGIHGYVLVY 85
Query: 748 SVDSPDSLENIPEKWTPEVKHFCPN-VPIILVGNKKDLRNDPATINELRKMKQEPVKPQE 572
S+ S S E + + H VPI++VGNK DL Q V +E
Sbjct: 86 SITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGNKSDLH------------MQRAVTAEE 133
Query: 571 GRAMAEKINAFAYLECSAKSKEGVREVFE 485
G+A+A + A+ E SA+ E V FE
Sbjct: 134 GKALANEWKC-AWTEASARHNENVARAFE 161
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 52.0 bits (119), Expect = 1e-07
Identities = 26/66 (39%), Positives = 37/66 (56%)
Frame = -2
Query: 832 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVG 653
+WDTAGQE LR Y ++ F V S + +N+P W V+ C N+PI+L G
Sbjct: 62 VWDTAGQEKLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRDLVR-VCENIPIVLCG 120
Query: 652 NKKDLR 635
NK D++
Sbjct: 121 NKVDVK 126
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 48.8 bits (111), Expect = 1e-06
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Frame = -2
Query: 850 KQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPN- 674
K+++L +WDTAGQE + + Y ++ + V + DS E + W +++ P+
Sbjct: 60 KRIKLQIWDTAGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEEL-SSWLSDIRAMAPST 118
Query: 673 VPIILVGNKKDLRN 632
+ ++L G+K DL+N
Sbjct: 119 ICVVLAGSKSDLQN 132
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 29.5 bits (63), Expect = 0.71
Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = -2
Query: 844 VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPI 665
V L L DT Q D + L+ ++C S E + W P + NVPI
Sbjct: 51 VSLVLVDT--QSDSNEREYLAAEIKKANVICLVYSDNYSYERVSIFWLPYFRSLGVNVPI 108
Query: 664 ILVGNK-KDLRN 632
+L NK +DL N
Sbjct: 109 VLCENKSEDLDN 120
>SPAC6B12.12 |tom70||mitochondrial TOM complex subunit
Tom70|Schizosaccharomyces pombe|chr 1|||Manual
Length = 625
Score = 27.1 bits (57), Expect = 3.8
Identities = 22/74 (29%), Positives = 32/74 (43%)
Frame = -2
Query: 658 VGNKKDLRNDPATINELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVREVFETA 479
VG ++ A+ +K+K K + + A E KS E ++V ETA
Sbjct: 45 VGGVYHVQQKKASHKRSKKLKAHQDKAESKVNEGKNEAAKVVKEEDLKSSETGKDV-ETA 103
Query: 478 TRAALQVKKKKKTR 437
AA KKKKK +
Sbjct: 104 AAAAAAAKKKKKNK 117
>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
Snf22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1680
Score = 26.6 bits (56), Expect = 5.0
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = -2
Query: 895 PTVFENYVADIEVDGKQVELALWDTAGQ-EDYDRLRPLSYPDTDVILMCFSV 743
P +FE+ I+ G V+L LW AG+ E DR+ P + LM F +
Sbjct: 1162 PFIFEDVERAIDPSGTNVDL-LWRAAGKFELLDRILPKLFLTGHKTLMFFQM 1212
>SPBC27B12.03c |||lathosterol oxidase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 329
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1
Query: 98 LYNRVAFLQHRYIIPRPVSSH 36
LY + L H++I+P P SSH
Sbjct: 178 LYAPLHKLHHKWIVPTPYSSH 198
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,738,772
Number of Sequences: 5004
Number of extensions: 76029
Number of successful extensions: 256
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 244
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 471335896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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