Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_pT_K02
(800 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK021811-1|BAB13901.1| 201|Homo sapiens protein ( Homo sapiens ... 97 7e-20
CR457284-1|CAG33565.1| 201|Homo sapiens FLJ11749 protein. 97 9e-20
BC010108-1|AAH10108.1| 201|Homo sapiens chromatin modifying pro... 97 9e-20
AY329087-1|AAQ91196.1| 201|Homo sapiens VPS20 protein. 97 9e-20
AK223187-1|BAD96907.1| 201|Homo sapiens hypothetical protein FL... 97 9e-20
BC014321-1|AAH14321.1| 233|Homo sapiens chromatin modifying pro... 35 0.30
AY329086-1|AAQ91195.1| 233|Homo sapiens SNF7-3 protein. 35 0.30
AB120734-1|BAC87888.1| 233|Homo sapiens Snf7 homologue associat... 35 0.30
BC021168-1|AAH21168.1| 219|Homo sapiens chromatin modifying pro... 34 0.52
BC020796-1|AAH20796.1| 219|Homo sapiens chromatin modifying pro... 34 0.52
BC016698-1|AAH16698.1| 219|Homo sapiens chromatin modifying pro... 34 0.52
BC007457-1|AAH07457.1| 219|Homo sapiens chromatin modifying pro... 34 0.52
BC006974-1|AAH06974.1| 219|Homo sapiens chromatin modifying pro... 34 0.52
AL356472-4|CAH72744.1| 219|Homo sapiens chromatin modifying pro... 34 0.52
AF229832-1|AAF42917.1| 139|Homo sapiens apoptosis-related prote... 34 0.52
AF275810-1|AAG23821.1| 131|Homo sapiens PNAS-114 protein. 33 0.91
AF132968-1|AAD27743.1| 218|Homo sapiens CGI-34 protein protein. 31 4.8
>AK021811-1|BAB13901.1| 201|Homo sapiens protein ( Homo sapiens
cDNA FLJ11749 fis, clone HEMBA1005558, weakly similar to
NUCLEAR PROTEIN SNF7. ).
Length = 201
Score = 97.1 bits (231), Expect = 7e-20
Identities = 41/108 (37%), Positives = 69/108 (63%)
Frame = -3
Query: 798 LXHNTDTQLEKLEQLTHDLEFAQIEIQVLDGLKTGNVALKKVHDILNIDEIEKIMEESRE 619
L T+ Q+ LE + +EF QIE++V++GL+ GN L K+H +++I+E+E+I++E++E
Sbjct: 73 LLDRTENQISSLEAMVQSIEFTQIEMKVMEGLQLGNECLNKMHQVMSIEEVERILDETQE 132
Query: 618 GIDKQREIDELISGQLTXXXXXXXXXXXXXXXXIQDELPDVPTDNLPE 475
++ QR+IDEL++G T Q ELP+VP++ LPE
Sbjct: 133 AVEYQRQIDELLAGSFTQEDEDAILEELSAITQEQIELPEVPSEPLPE 180
>CR457284-1|CAG33565.1| 201|Homo sapiens FLJ11749 protein.
Length = 201
Score = 96.7 bits (230), Expect = 9e-20
Identities = 41/108 (37%), Positives = 69/108 (63%)
Frame = -3
Query: 798 LXHNTDTQLEKLEQLTHDLEFAQIEIQVLDGLKTGNVALKKVHDILNIDEIEKIMEESRE 619
L T+ Q+ LE + +EF QIE++V++GL+ GN L K+H +++I+E+E+I++E++E
Sbjct: 73 LLDRTENQISSLEAMVQSIEFTQIEMKVMEGLQFGNECLNKMHQVMSIEEVERILDETQE 132
Query: 618 GIDKQREIDELISGQLTXXXXXXXXXXXXXXXXIQDELPDVPTDNLPE 475
++ QR+IDEL++G T Q ELP+VP++ LPE
Sbjct: 133 AVEYQRQIDELLAGSFTQEDEDAILEELSAITQEQIELPEVPSEPLPE 180
>BC010108-1|AAH10108.1| 201|Homo sapiens chromatin modifying
protein 6 protein.
Length = 201
Score = 96.7 bits (230), Expect = 9e-20
Identities = 41/108 (37%), Positives = 69/108 (63%)
Frame = -3
Query: 798 LXHNTDTQLEKLEQLTHDLEFAQIEIQVLDGLKTGNVALKKVHDILNIDEIEKIMEESRE 619
L T+ Q+ LE + +EF QIE++V++GL+ GN L K+H +++I+E+E+I++E++E
Sbjct: 73 LLDRTENQISSLEAMVQSIEFTQIEMKVMEGLQFGNECLNKMHQVMSIEEVERILDETQE 132
Query: 618 GIDKQREIDELISGQLTXXXXXXXXXXXXXXXXIQDELPDVPTDNLPE 475
++ QR+IDEL++G T Q ELP+VP++ LPE
Sbjct: 133 AVEYQRQIDELLAGSFTQEDEDAILEELSAITQEQIELPEVPSEPLPE 180
>AY329087-1|AAQ91196.1| 201|Homo sapiens VPS20 protein.
Length = 201
Score = 96.7 bits (230), Expect = 9e-20
Identities = 41/108 (37%), Positives = 69/108 (63%)
Frame = -3
Query: 798 LXHNTDTQLEKLEQLTHDLEFAQIEIQVLDGLKTGNVALKKVHDILNIDEIEKIMEESRE 619
L T+ Q+ LE + +EF QIE++V++GL+ GN L K+H +++I+E+E+I++E++E
Sbjct: 73 LLDRTENQISSLEAMVQSIEFTQIEMKVMEGLQFGNECLNKMHQVMSIEEVERILDETQE 132
Query: 618 GIDKQREIDELISGQLTXXXXXXXXXXXXXXXXIQDELPDVPTDNLPE 475
++ QR+IDEL++G T Q ELP+VP++ LPE
Sbjct: 133 AVEYQRQIDELLAGSFTQEDEDAILEELSAITQEQIELPEVPSEPLPE 180
>AK223187-1|BAD96907.1| 201|Homo sapiens hypothetical protein
FLJ11749 variant protein.
Length = 201
Score = 96.7 bits (230), Expect = 9e-20
Identities = 41/108 (37%), Positives = 69/108 (63%)
Frame = -3
Query: 798 LXHNTDTQLEKLEQLTHDLEFAQIEIQVLDGLKTGNVALKKVHDILNIDEIEKIMEESRE 619
L T+ Q+ LE + +EF QIE++V++GL+ GN L K+H +++I+E+E+I++E++E
Sbjct: 73 LLDRTENQISSLEAMVQSIEFTQIEMKVMEGLQFGNECLNKMHQVMSIEEVERILDETQE 132
Query: 618 GIDKQREIDELISGQLTXXXXXXXXXXXXXXXXIQDELPDVPTDNLPE 475
++ QR+IDEL++G T Q ELP+VP++ LPE
Sbjct: 133 AVEYQRQIDELLAGSFTQEDEDAILEELSAITQEQIELPEVPSEPLPE 180
>BC014321-1|AAH14321.1| 233|Homo sapiens chromatin modifying
protein 4C protein.
Length = 233
Score = 35.1 bits (77), Expect = 0.30
Identities = 20/68 (29%), Positives = 35/68 (51%)
Frame = -3
Query: 783 DTQLEKLEQLTHDLEFAQIEIQVLDGLKTGNVALKKVHDILNIDEIEKIMEESREGIDKQ 604
D L +E LE + +VL + A+K VH+ +++++I+ +M+E E D
Sbjct: 83 DGTLSTIEFQREALENSHTNTEVLRNMGFAAKAMKSVHENMDLNKIDDLMQEITEQQDIA 142
Query: 603 REIDELIS 580
+EI E S
Sbjct: 143 QEISEAFS 150
>AY329086-1|AAQ91195.1| 233|Homo sapiens SNF7-3 protein.
Length = 233
Score = 35.1 bits (77), Expect = 0.30
Identities = 20/68 (29%), Positives = 35/68 (51%)
Frame = -3
Query: 783 DTQLEKLEQLTHDLEFAQIEIQVLDGLKTGNVALKKVHDILNIDEIEKIMEESREGIDKQ 604
D L +E LE + +VL + A+K VH+ +++++I+ +M+E E D
Sbjct: 83 DGTLSTIEFQREALENSHTNTEVLRNMGFAAKAMKSVHENMDLNKIDDLMQEITEQQDIA 142
Query: 603 REIDELIS 580
+EI E S
Sbjct: 143 QEISEAFS 150
>AB120734-1|BAC87888.1| 233|Homo sapiens Snf7 homologue associated
with Alix 3 protein.
Length = 233
Score = 35.1 bits (77), Expect = 0.30
Identities = 20/68 (29%), Positives = 35/68 (51%)
Frame = -3
Query: 783 DTQLEKLEQLTHDLEFAQIEIQVLDGLKTGNVALKKVHDILNIDEIEKIMEESREGIDKQ 604
D L +E LE + +VL + A+K VH+ +++++I+ +M+E E D
Sbjct: 83 DGTLSTIEFQREALENSHTNTEVLRNMGFAAKAMKSVHENMDLNKIDDLMQEITEQQDIA 142
Query: 603 REIDELIS 580
+EI E S
Sbjct: 143 QEISEAFS 150
>BC021168-1|AAH21168.1| 219|Homo sapiens chromatin modifying
protein 5 protein.
Length = 219
Score = 34.3 bits (75), Expect = 0.52
Identities = 17/70 (24%), Positives = 35/70 (50%)
Frame = -3
Query: 789 NTDTQLEKLEQLTHDLEFAQIEIQVLDGLKTGNVALKKVHDILNIDEIEKIMEESREGID 610
N Q +EQ + ++ + +D +K G +KK + + ID+IE + ++ + ++
Sbjct: 81 NLAQQSFNMEQANYTIQSLKDTKTTVDAMKLGVKEMKKAYKQVKIDQIEDLQDQLEDMME 140
Query: 609 KQREIDELIS 580
EI E +S
Sbjct: 141 DANEIQEALS 150
>BC020796-1|AAH20796.1| 219|Homo sapiens chromatin modifying
protein 5 protein.
Length = 219
Score = 34.3 bits (75), Expect = 0.52
Identities = 17/70 (24%), Positives = 35/70 (50%)
Frame = -3
Query: 789 NTDTQLEKLEQLTHDLEFAQIEIQVLDGLKTGNVALKKVHDILNIDEIEKIMEESREGID 610
N Q +EQ + ++ + +D +K G +KK + + ID+IE + ++ + ++
Sbjct: 81 NLAQQSFNMEQANYTIQSLKDTKTTVDAMKLGVKEMKKAYKQVKIDQIEDLQDQLEDMME 140
Query: 609 KQREIDELIS 580
EI E +S
Sbjct: 141 DANEIQEALS 150
>BC016698-1|AAH16698.1| 219|Homo sapiens chromatin modifying
protein 5 protein.
Length = 219
Score = 34.3 bits (75), Expect = 0.52
Identities = 17/70 (24%), Positives = 35/70 (50%)
Frame = -3
Query: 789 NTDTQLEKLEQLTHDLEFAQIEIQVLDGLKTGNVALKKVHDILNIDEIEKIMEESREGID 610
N Q +EQ + ++ + +D +K G +KK + + ID+IE + ++ + ++
Sbjct: 81 NLAQQSFNMEQANYTIQSLKDTKTTVDAMKLGVKEMKKAYKQVKIDQIEDLQDQLEDMME 140
Query: 609 KQREIDELIS 580
EI E +S
Sbjct: 141 DANEIQEALS 150
>BC007457-1|AAH07457.1| 219|Homo sapiens chromatin modifying
protein 5 protein.
Length = 219
Score = 34.3 bits (75), Expect = 0.52
Identities = 17/70 (24%), Positives = 35/70 (50%)
Frame = -3
Query: 789 NTDTQLEKLEQLTHDLEFAQIEIQVLDGLKTGNVALKKVHDILNIDEIEKIMEESREGID 610
N Q +EQ + ++ + +D +K G +KK + + ID+IE + ++ + ++
Sbjct: 81 NLAQQSFNMEQANYTIQSLKDTKTTVDAMKLGVKEMKKAYKQVKIDQIEDLQDQLEDMME 140
Query: 609 KQREIDELIS 580
EI E +S
Sbjct: 141 DANEIQEALS 150
>BC006974-1|AAH06974.1| 219|Homo sapiens chromatin modifying
protein 5 protein.
Length = 219
Score = 34.3 bits (75), Expect = 0.52
Identities = 17/70 (24%), Positives = 35/70 (50%)
Frame = -3
Query: 789 NTDTQLEKLEQLTHDLEFAQIEIQVLDGLKTGNVALKKVHDILNIDEIEKIMEESREGID 610
N Q +EQ + ++ + +D +K G +KK + + ID+IE + ++ + ++
Sbjct: 81 NLAQQSFNMEQANYTIQSLKDTKTTVDAMKLGVKEMKKAYKQVKIDQIEDLQDQLEDMME 140
Query: 609 KQREIDELIS 580
EI E +S
Sbjct: 141 DANEIQEALS 150
>AL356472-4|CAH72744.1| 219|Homo sapiens chromatin modifying
protein 5 protein.
Length = 219
Score = 34.3 bits (75), Expect = 0.52
Identities = 17/70 (24%), Positives = 35/70 (50%)
Frame = -3
Query: 789 NTDTQLEKLEQLTHDLEFAQIEIQVLDGLKTGNVALKKVHDILNIDEIEKIMEESREGID 610
N Q +EQ + ++ + +D +K G +KK + + ID+IE + ++ + ++
Sbjct: 81 NLAQQSFNMEQANYTIQSLKDTKTTVDAMKLGVKEMKKAYKQVKIDQIEDLQDQLEDMME 140
Query: 609 KQREIDELIS 580
EI E +S
Sbjct: 141 DANEIQEALS 150
>AF229832-1|AAF42917.1| 139|Homo sapiens apoptosis-related protein
PNAS-2 protein.
Length = 139
Score = 34.3 bits (75), Expect = 0.52
Identities = 17/70 (24%), Positives = 35/70 (50%)
Frame = -3
Query: 789 NTDTQLEKLEQLTHDLEFAQIEIQVLDGLKTGNVALKKVHDILNIDEIEKIMEESREGID 610
N Q +EQ + ++ + +D +K G +KK + + ID+IE + ++ + ++
Sbjct: 1 NLAQQSFNMEQANYTIQSLKDTKTTVDAMKLGVKEMKKAYKQVKIDQIEDLQDQLEDMME 60
Query: 609 KQREIDELIS 580
EI E +S
Sbjct: 61 DANEIQEALS 70
>AF275810-1|AAG23821.1| 131|Homo sapiens PNAS-114 protein.
Length = 131
Score = 33.5 bits (73), Expect = 0.91
Identities = 15/62 (24%), Positives = 33/62 (53%)
Frame = -3
Query: 765 LEQLTHDLEFAQIEIQVLDGLKTGNVALKKVHDILNIDEIEKIMEESREGIDKQREIDEL 586
+EQ + ++ + +D +K G +KK + + ID+IE + ++ + ++ EI E
Sbjct: 1 MEQANYTIQSLKDTKTTVDAMKLGVKEMKKAYKQVKIDQIEDLQDQLEDMMEDANEIQEA 60
Query: 585 IS 580
+S
Sbjct: 61 LS 62
>AF132968-1|AAD27743.1| 218|Homo sapiens CGI-34 protein protein.
Length = 218
Score = 31.1 bits (67), Expect = 4.8
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = -3
Query: 714 LDGLKTGNVALKKVHDILNIDEIEKIMEESREGIDKQREIDELIS 580
+D +K G +KK + + ID+IE + ++ + ++ EI E +S
Sbjct: 105 VDAMKLGVKEMKKAYKPVKIDQIEDLQDQLEDMMEDANEIQEALS 149
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,916,328
Number of Sequences: 237096
Number of extensions: 1546148
Number of successful extensions: 2869
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2869
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9869080686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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