Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_pT_K02
         (800 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    23   3.3  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    23   3.3  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    23   3.3  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   3.3  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    23   4.4  
DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.               22   5.8  

>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = -1

Query: 431 RVQQKLLWKPKYYLSNTILIVHHHHIAVYNKINKVNWDN 315
           R +++   +PK   S +   +H+++   YN  NK N++N
Sbjct: 70  RTERERSREPKIISSLSNKTIHNNNNYKYNYNNKYNYNN 108


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 8/36 (22%), Positives = 20/36 (55%)
 Frame = -1

Query: 212 IYNNVMSMSSDTLFHIRCAVNLFNYLTEKRFIKEKY 105
           I+   +S  +  L++   + +  NY+  ++F+K +Y
Sbjct: 251 IFGMALSPLTQNLYYSALSSHNLNYVNTEQFVKSQY 286


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 286 SFCNRCIHNTVICCIY 239
           +FC  CIH TV   ++
Sbjct: 33  AFCRNCIHPTVFSVLF 48


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 286 SFCNRCIHNTVICCIY 239
           +FC  CIH TV   ++
Sbjct: 481 AFCRNCIHPTVFSVLF 496


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 9/43 (20%), Positives = 20/43 (46%)
 Frame = -3

Query: 753 THDLEFAQIEIQVLDGLKTGNVALKKVHDILNIDEIEKIMEES 625
           +H L +  +E  +    +  N+  + + DI N     K+M ++
Sbjct: 273 SHSLYYVNMEPFMKSQYEENNIEYEGIQDIFNTQSSAKVMSKN 315


>DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.
          Length = 152

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 8/35 (22%), Positives = 22/35 (62%)
 Frame = -3

Query: 705 LKTGNVALKKVHDILNIDEIEKIMEESREGIDKQR 601
           ++  ++ L    + LN+D+I+ ++E+  E + ++R
Sbjct: 19  VRCDDITLCLKQENLNLDDIDSLLEDESERMLRKR 53


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,500
Number of Sequences: 438
Number of extensions: 3474
Number of successful extensions: 22
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25367793
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)