Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_pT_J18
(829 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 25 1.1
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 25 1.1
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 25 1.1
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.5
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 24 2.0
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 24 2.0
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 24 2.0
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 23 2.6
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 23 4.6
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 23 4.6
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 23 4.6
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 23 4.6
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 22 8.0
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 22 8.0
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 22 8.0
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 22 8.0
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 24.6 bits (51), Expect = 1.1
Identities = 10/30 (33%), Positives = 21/30 (70%)
Frame = -1
Query: 568 RNEKKEKRFRQFSRNYCRVK*DACKSKEKR 479
+NEK+ +++R+ S+ R K + +SKE++
Sbjct: 51 KNEKEYRKYRERSKERSRDKRERERSKERK 80
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 24.6 bits (51), Expect = 1.1
Identities = 10/30 (33%), Positives = 21/30 (70%)
Frame = -1
Query: 568 RNEKKEKRFRQFSRNYCRVK*DACKSKEKR 479
+NEK+ +++R+ S+ R K + +SKE++
Sbjct: 51 KNEKEYRKYRERSKERSRDKRERERSKERK 80
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 24.6 bits (51), Expect = 1.1
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -2
Query: 561 KRKKRDLDSSQETIAELNETPAKVKRKDKTT 469
KRK +++ ET + + T K++RK T
Sbjct: 217 KRKSSTIENESETESNASSTKTKMRRKSGAT 247
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 1.5
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = -1
Query: 343 DCVRRCSCEIDAI 305
+C +RC+C+ID I
Sbjct: 473 ECNKRCNCDIDCI 485
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 23.8 bits (49), Expect = 2.0
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +1
Query: 421 ERVRQRVVGV*FISTNCCFVFSLYFCRRLI*LCNSFLRTV*ISFLS 558
ER+RQ+ G I F F C L+ + N + V ISF +
Sbjct: 69 ERIRQKAAGHWVIHPCSSFRFYWDLCMLLLLVANLIILPVAISFFN 114
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 23.8 bits (49), Expect = 2.0
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +1
Query: 421 ERVRQRVVGV*FISTNCCFVFSLYFCRRLI*LCNSFLRTV*ISFLS 558
ER+RQ+ G I F F C L+ + N + V ISF +
Sbjct: 69 ERIRQKAAGHWVIHPCSSFRFYWDLCMLLLLVANLIILPVAISFFN 114
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 23.8 bits (49), Expect = 2.0
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +1
Query: 421 ERVRQRVVGV*FISTNCCFVFSLYFCRRLI*LCNSFLRTV*ISFLS 558
ER+RQ+ G I F F C L+ + N + V ISF +
Sbjct: 69 ERIRQKAAGHWVIHPCSSFRFYWDLCMLLLLVANLIILPVAISFFN 114
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 23.4 bits (48), Expect = 2.6
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = -2
Query: 480 DKTTVSGNKLYPDNPLPDAFKDKILSLYPDLISFSEDERKHFVRHWIAYGGVLVKSMRSA 301
++ + S +++YP+N +P K I L F + HFV YG V S+
Sbjct: 32 EQPSFSVHQVYPENLIPRLAKKAIQVLGVTEKEFFDQMGVHFVGFVGQYGYDRVLSVLGR 91
Query: 300 NV-DFVVHNNNCITY 259
+V DF+ +N Y
Sbjct: 92 HVRDFLNGLDNLHEY 106
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 4.6
Identities = 9/30 (30%), Positives = 20/30 (66%)
Frame = -1
Query: 568 RNEKKEKRFRQFSRNYCRVK*DACKSKEKR 479
+NE++ +++R+ S+ R + + KSKE +
Sbjct: 51 KNEREYRKYRETSKERSRDRKEREKSKEHK 80
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 4.6
Identities = 9/30 (30%), Positives = 20/30 (66%)
Frame = -1
Query: 568 RNEKKEKRFRQFSRNYCRVK*DACKSKEKR 479
+NE++ +++R+ S+ R + + KSKE +
Sbjct: 51 KNEREYRKYRETSKERSRDRKEREKSKEHK 80
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 4.6
Identities = 9/30 (30%), Positives = 20/30 (66%)
Frame = -1
Query: 568 RNEKKEKRFRQFSRNYCRVK*DACKSKEKR 479
+NE++ +++R+ S+ R + + KSKE +
Sbjct: 51 KNEREYRKYRETSKERSRDRKEREKSKEHK 80
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 22.6 bits (46), Expect = 4.6
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = -1
Query: 568 RNEKKEKRFRQFSRNYCRVK*DACKSKEKR 479
+NE +++R+ S+ R K + +SKE++
Sbjct: 289 KNENSYRKYRETSKERSRDKTERERSKERK 318
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 8.0
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = -1
Query: 568 RNEKKEKRFRQFSRNYCRVK*DACKSKEKR 479
+NE++ + +R+ SR R + + +SKE +
Sbjct: 51 KNEREYREYRETSRERSRDRKERERSKEPK 80
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 8.0
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = -1
Query: 568 RNEKKEKRFRQFSRNYCRVK*DACKSKEKR 479
+NE++ + +R+ SR R + + +SKE +
Sbjct: 51 KNEREYREYRETSRERSRDRKERERSKEPK 80
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 8.0
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = -1
Query: 568 RNEKKEKRFRQFSRNYCRVK*DACKSKEKR 479
+NE++ + +R+ SR R + + +SKE +
Sbjct: 51 KNEREYREYRETSRERSRDRKERERSKEPK 80
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 8.0
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = -1
Query: 568 RNEKKEKRFRQFSRNYCRVK*DACKSKEKR 479
+NE++ + +R+ SR R + + +SKE +
Sbjct: 51 KNEREYREYRETSRERSRDRKERERSKEPK 80
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,676
Number of Sequences: 438
Number of extensions: 3994
Number of successful extensions: 33
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26460186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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