Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_pT_J14
         (751 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   4.0  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   5.3  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    22   7.1  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    21   9.3  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   9.3  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 204 TAPPARGAAVARQTKPR 154
           ++PPA+GAA A Q   R
Sbjct: 527 SSPPAKGAAAAGQPSKR 543


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 10/27 (37%), Positives = 11/27 (40%)
 Frame = +3

Query: 183 PPSLGARSPCTSPPATR*RFISFIPHH 263
           PPS+   SP   P   R  F     HH
Sbjct: 130 PPSVSLSSPPREPGTPRINFTKLKRHH 156


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 39  LNHPKISPTRAPTLYSMF 92
           L HP  SP  AP+ Y +F
Sbjct: 267 LPHPPYSPDLAPSDYFLF 284


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 198 PPARGAAVARQTKPRKE 148
           PP R A + R+ KP  E
Sbjct: 25  PPTRPARLRREAKPEAE 41


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +3

Query: 549 VRSPRRIIMPPYGIAALT*IPGLVYVEPVPP 641
           VRSP    +PP   A +  IP +  +  +PP
Sbjct: 401 VRSPAGGQLPPSAGAPMPPIPNMSNMSGMPP 431


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,787
Number of Sequences: 438
Number of extensions: 3803
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)