Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_pT_J03
(835 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC050537-1|AAH50537.2| 463|Homo sapiens FLJ20160 protein protein. 59 2e-08
AK127176-1|BAC86869.1| 791|Homo sapiens protein ( Homo sapiens ... 59 2e-08
AK000167-1|BAA90987.1| 463|Homo sapiens protein ( Homo sapiens ... 59 2e-08
AC093388-1|AAY24173.1| 463|Homo sapiens unknown protein. 59 2e-08
BC040487-1|AAH40487.1| 586|Homo sapiens hypothetical protein FL... 39 0.019
AK093092-1|BAC04050.1| 586|Homo sapiens protein. 39 0.019
>BC050537-1|AAH50537.2| 463|Homo sapiens FLJ20160 protein protein.
Length = 463
Score = 58.8 bits (136), Expect = 2e-08
Identities = 37/146 (25%), Positives = 58/146 (39%)
Frame = -2
Query: 831 DLGAXRSLMGITITXXXXXXXXXXXXXGPIIRKLGHXNVLFIGFIXYAIRLLGYSLIYNP 652
DL +L G+ +I +GH VL+IG R + S + N
Sbjct: 146 DLNGTTTLFGVCSVLSHVSELTAYFFSHKLIELIGHIRVLYIGLACNTARYIYISYLENA 205
Query: 651 WLCLVFEALESVTSSLSFTAAVTYAARLSSTTTDTSVQXXXXXXXXXXXXXXGSLIGGYL 472
W L E L+ VT + + A ++Y + TS Q G++IGG L
Sbjct: 206 WTVLPMEVLQGVTHAAIWAACISYLSAAVPPELRTSAQGILQGLHLGLGRGCGAMIGGVL 265
Query: 471 MKFFGTRPTYQIFAGATLVTGCMYYL 394
+ +FG T++ A LV ++ L
Sbjct: 266 VNYFGAAATFRGIGMACLVILLLFAL 291
>AK127176-1|BAC86869.1| 791|Homo sapiens protein ( Homo sapiens
cDNA FLJ45241 fis, clone BRCOC2006164. ).
Length = 791
Score = 58.8 bits (136), Expect = 2e-08
Identities = 37/146 (25%), Positives = 58/146 (39%)
Frame = -2
Query: 831 DLGAXRSLMGITITXXXXXXXXXXXXXGPIIRKLGHXNVLFIGFIXYAIRLLGYSLIYNP 652
DL +L G+ +I +GH VL+IG R + S + N
Sbjct: 474 DLNGTTTLFGVCSVLSHVSELTAYFFSHKLIELIGHIRVLYIGLACNTARYIYISYLENA 533
Query: 651 WLCLVFEALESVTSSLSFTAAVTYAARLSSTTTDTSVQXXXXXXXXXXXXXXGSLIGGYL 472
W L E L+ VT + + A ++Y + TS Q G++IGG L
Sbjct: 534 WTVLPMEVLQGVTHAAIWAACISYLSAAVPPELRTSAQGILQGLHLGLGRGCGAMIGGVL 593
Query: 471 MKFFGTRPTYQIFAGATLVTGCMYYL 394
+ +FG T++ A LV ++ L
Sbjct: 594 VNYFGAAATFRGIGMACLVILLLFAL 619
>AK000167-1|BAA90987.1| 463|Homo sapiens protein ( Homo sapiens
cDNA FLJ20160 fis, clone COL09072. ).
Length = 463
Score = 58.8 bits (136), Expect = 2e-08
Identities = 37/146 (25%), Positives = 58/146 (39%)
Frame = -2
Query: 831 DLGAXRSLMGITITXXXXXXXXXXXXXGPIIRKLGHXNVLFIGFIXYAIRLLGYSLIYNP 652
DL +L G+ +I +GH VL+IG R + S + N
Sbjct: 146 DLNGTTTLFGVCSVLSHVSELTAYFFSHKLIELIGHIRVLYIGLACNTARYIYISYLENA 205
Query: 651 WLCLVFEALESVTSSLSFTAAVTYAARLSSTTTDTSVQXXXXXXXXXXXXXXGSLIGGYL 472
W L E L+ VT + + A ++Y + TS Q G++IGG L
Sbjct: 206 WTVLPMEVLQGVTHAAIWAACISYLSAAVPPELRTSAQGILQGLHLGLGRGCGAMIGGVL 265
Query: 471 MKFFGTRPTYQIFAGATLVTGCMYYL 394
+ +FG T++ A LV ++ L
Sbjct: 266 VNYFGAAATFRGIGMACLVILLLFAL 291
>AC093388-1|AAY24173.1| 463|Homo sapiens unknown protein.
Length = 463
Score = 58.8 bits (136), Expect = 2e-08
Identities = 37/146 (25%), Positives = 58/146 (39%)
Frame = -2
Query: 831 DLGAXRSLMGITITXXXXXXXXXXXXXGPIIRKLGHXNVLFIGFIXYAIRLLGYSLIYNP 652
DL +L G+ +I +GH VL+IG R + S + N
Sbjct: 146 DLNGTTTLFGVCSVLSHVSELTAYFFSHKLIELIGHIRVLYIGLACNTARYIYISYLENA 205
Query: 651 WLCLVFEALESVTSSLSFTAAVTYAARLSSTTTDTSVQXXXXXXXXXXXXXXGSLIGGYL 472
W L E L+ VT + + A ++Y + TS Q G++IGG L
Sbjct: 206 WTVLPMEVLQGVTHAAIWAACISYLSAAVPPELRTSAQGILQGLHLGLGRGCGAMIGGVL 265
Query: 471 MKFFGTRPTYQIFAGATLVTGCMYYL 394
+ +FG T++ A LV ++ L
Sbjct: 266 VNYFGAAATFRGIGMACLVILLLFAL 291
>BC040487-1|AAH40487.1| 586|Homo sapiens hypothetical protein
FLJ35773 protein.
Length = 586
Score = 39.1 bits (87), Expect = 0.019
Identities = 27/139 (19%), Positives = 56/139 (40%)
Frame = -2
Query: 831 DLGAXRSLMGITITXXXXXXXXXXXXXGPIIRKLGHXNVLFIGFIXYAIRLLGYSLIYNP 652
D G+ +MG ++ ++RKL ++ +G A +LL YS +++
Sbjct: 395 DHGSGELVMGFSVALSLLGEILLHPFKATLLRKLSRTGLVGLGLSCLAGQLLYYSFLWSW 454
Query: 651 WLCLVFEALESVTSSLSFTAAVTYAARLSSTTTDTSVQXXXXXXXXXXXXXXGSLIGGYL 472
W L + L ++++ + A L++ + ++ GS +GG++
Sbjct: 455 WSVLPIQILSAISNRALWWAVGASVEDLATPRMERALSALFRGHFYGSGCSLGSFVGGFV 514
Query: 471 MKFFGTRPTYQIFAGATLV 415
+ F YQ A L+
Sbjct: 515 VMRFSLAVLYQACCVALLL 533
>AK093092-1|BAC04050.1| 586|Homo sapiens protein.
Length = 586
Score = 39.1 bits (87), Expect = 0.019
Identities = 27/139 (19%), Positives = 56/139 (40%)
Frame = -2
Query: 831 DLGAXRSLMGITITXXXXXXXXXXXXXGPIIRKLGHXNVLFIGFIXYAIRLLGYSLIYNP 652
D G+ +MG ++ ++RKL ++ +G A +LL YS +++
Sbjct: 395 DHGSGELVMGFSVALSLLGEILLHPFKATLLRKLSRTGLVGLGLSCLAGQLLYYSFLWSW 454
Query: 651 WLCLVFEALESVTSSLSFTAAVTYAARLSSTTTDTSVQXXXXXXXXXXXXXXGSLIGGYL 472
W L + L ++++ + A L++ + ++ GS +GG++
Sbjct: 455 WSVLPIQILSAISNRALWWAVGASVEDLATPRMERALSALFRGHFYGSGCSLGSFVGGFV 514
Query: 471 MKFFGTRPTYQIFAGATLV 415
+ F YQ A L+
Sbjct: 515 VMRFSLAVLYQACCVALLL 533
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,586,417
Number of Sequences: 237096
Number of extensions: 2172288
Number of successful extensions: 8390
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8386
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10482413384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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