Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_pT_J02
(720 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032625-4|CAB63350.2| 792|Caenorhabditis elegans Hypothetical ... 32 0.47
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 0.63
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 0.63
U38937-1|AAA93079.1| 441|Caenorhabditis elegans LIN-1 protein. 31 0.63
U38935-1|AAB60254.1| 441|Caenorhabditis elegans LIN-1 protein. 31 0.63
AF067606-1|AAC17530.3| 441|Caenorhabditis elegans Abnormal cell... 31 0.63
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 0.83
Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical pr... 31 0.83
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 31 0.83
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ... 31 1.1
AC006696-8|AAF39989.1| 120|Caenorhabditis elegans Hypothetical ... 30 1.9
AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical ... 29 3.3
U97196-12|AAB52456.2| 564|Caenorhabditis elegans Hypothetical p... 29 4.4
Z83223-4|CAB05716.2| 534|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical pr... 28 5.8
L13200-7|AAA28189.1| 206|Caenorhabditis elegans Prion-like-(q/n... 28 5.8
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 28 7.7
U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated p... 28 7.7
U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical pr... 28 7.7
D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine recep... 28 7.7
>AL032625-4|CAB63350.2| 792|Caenorhabditis elegans Hypothetical
protein Y37H9A.3 protein.
Length = 792
Score = 31.9 bits (69), Expect = 0.47
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = -2
Query: 299 SHHPECPHPRSSQCSSDGEVGPQVVPEARPQLPTHTAQVEEASPQATPPPTVDPDR 132
+HHP P P Q + E P +P+ + P TA A+P AT PT DP +
Sbjct: 215 AHHP--PAPPIRQAAHAAESSPPPIPQRKSSAPAPTA----AAPPATKEPT-DPKK 263
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.5 bits (68), Expect = 0.63
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
Frame = +1
Query: 139 GSTVGGGVACGDASSTCAVCVGNCGRASGTTC-GPTSPSEEHWEERGCGHSG 291
G GGG CG C G CG G C G +S GCG G
Sbjct: 108 GGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGG 159
Score = 31.5 bits (68), Expect = 0.63
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -2
Query: 281 PHPRSSQCSSDG-EVGPQVVPEARPQLPTHTAQVEEASPQATP 156
P P ++ SS G G + PEA P P+ EA+P+A P
Sbjct: 456 PAPEAAPASSGGYSGGSEAAPEAAPAAPSGGYSGSEAAPEAAP 498
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -2
Query: 254 SDGEVGPQVVPEARPQLPTHTAQVEEASPQATP 156
S G G + PEA P P+ EA+P+A P
Sbjct: 484 SGGYSGSEAAPEAAPAAPSGGYSGSEAAPEAAP 516
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -2
Query: 254 SDGEVGPQVVPEARPQLPTHTAQVEEASPQATP 156
S G G + PEA P P+ EA+P+A P
Sbjct: 502 SGGYSGSEAAPEAAPAAPSGGYSGSEAAPEAAP 534
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -2
Query: 254 SDGEVGPQVVPEARPQLPTHTAQVEEASPQATP 156
S G G + PEA P P+ EA+P+A P
Sbjct: 520 SGGYSGSEAAPEAAPAAPSGGYSGSEAAPEAAP 552
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -2
Query: 254 SDGEVGPQVVPEARPQLPTHTAQVEEASPQATP 156
S G G + PEA P P+ EA+P+A P
Sbjct: 538 SGGYSGSEAAPEAAPAAPSGGYSGSEAAPEAAP 570
Score = 27.9 bits (59), Expect = 7.7
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 2/55 (3%)
Frame = +1
Query: 139 GSTVGGGVACGDASSTCAVCVGNCGRASGTTCGPTSPSEEHWEERGC--GHSGWC 297
G GGG CG C G CG G CG GC G SG C
Sbjct: 94 GGGCGGGGGCGGGGGGCGGGGGGCG-GGGGGCGGGGGGCGGGGGGGCGGGSSGGC 147
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.5 bits (68), Expect = 0.63
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
Frame = +1
Query: 139 GSTVGGGVACGDASSTCAVCVGNCGRASGTTC-GPTSPSEEHWEERGCGHSG 291
G GGG CG C G CG G C G +S GCG G
Sbjct: 108 GGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGG 159
Score = 31.5 bits (68), Expect = 0.63
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -2
Query: 281 PHPRSSQCSSDG-EVGPQVVPEARPQLPTHTAQVEEASPQATP 156
P P ++ SS G G + PEA P P+ EA+P+A P
Sbjct: 456 PAPEAAPASSGGYSGGSEAAPEAAPAAPSGGYSGSEAAPEAAP 498
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -2
Query: 254 SDGEVGPQVVPEARPQLPTHTAQVEEASPQATP 156
S G G + PEA P P+ EA+P+A P
Sbjct: 484 SGGYSGSEAAPEAAPAAPSGGYSGSEAAPEAAP 516
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -2
Query: 254 SDGEVGPQVVPEARPQLPTHTAQVEEASPQATP 156
S G G + PEA P P+ EA+P+A P
Sbjct: 502 SGGYSGSEAAPEAAPAAPSGGYSGSEAAPEAAP 534
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -2
Query: 254 SDGEVGPQVVPEARPQLPTHTAQVEEASPQATP 156
S G G + PEA P P+ EA+P+A P
Sbjct: 520 SGGYSGSEAAPEAAPAAPSGGYSGSEAAPEAAP 552
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -2
Query: 254 SDGEVGPQVVPEARPQLPTHTAQVEEASPQATP 156
S G G + PEA P P+ EA+P+A P
Sbjct: 538 SGGYSGSEAAPEAAPAAPSGGYSGSEAAPEAAP 570
Score = 27.9 bits (59), Expect = 7.7
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 2/55 (3%)
Frame = +1
Query: 139 GSTVGGGVACGDASSTCAVCVGNCGRASGTTCGPTSPSEEHWEERGC--GHSGWC 297
G GGG CG C G CG G CG GC G SG C
Sbjct: 94 GGGCGGGGGCGGGGGGCGGGGGGCG-GGGGGCGGGGGGCGGGGGGGCGGGSSGGC 147
>U38937-1|AAA93079.1| 441|Caenorhabditis elegans LIN-1 protein.
Length = 441
Score = 31.5 bits (68), Expect = 0.63
Identities = 20/69 (28%), Positives = 24/69 (34%), Gaps = 6/69 (8%)
Frame = -2
Query: 302 TSHHPECPHPRSSQCSSDGEVGPQVVPE-ARPQLPTHTAQVEEASPQAT-----PPPTVD 141
T+H P P S CS V P + P + + SP T PPP
Sbjct: 216 TTHSVSTPSPTDSVCSPSSSVASSATPSTSSPVDESRQCRKRSLSPSTTSSTTAPPPPPQ 275
Query: 140 PDRMKNCKP 114
P K KP
Sbjct: 276 PPTKKGMKP 284
>U38935-1|AAB60254.1| 441|Caenorhabditis elegans LIN-1 protein.
Length = 441
Score = 31.5 bits (68), Expect = 0.63
Identities = 20/69 (28%), Positives = 24/69 (34%), Gaps = 6/69 (8%)
Frame = -2
Query: 302 TSHHPECPHPRSSQCSSDGEVGPQVVPE-ARPQLPTHTAQVEEASPQAT-----PPPTVD 141
T+H P P S CS V P + P + + SP T PPP
Sbjct: 216 TTHSVSTPSPTDSVCSPSSSVASSATPSTSSPVDESRQCRKRSLSPSTTSSTTAPPPPPQ 275
Query: 140 PDRMKNCKP 114
P K KP
Sbjct: 276 PPTKKGMKP 284
>AF067606-1|AAC17530.3| 441|Caenorhabditis elegans Abnormal cell
lineage protein 1 protein.
Length = 441
Score = 31.5 bits (68), Expect = 0.63
Identities = 20/69 (28%), Positives = 24/69 (34%), Gaps = 6/69 (8%)
Frame = -2
Query: 302 TSHHPECPHPRSSQCSSDGEVGPQVVPE-ARPQLPTHTAQVEEASPQAT-----PPPTVD 141
T+H P P S CS V P + P + + SP T PPP
Sbjct: 216 TTHSVSTPSPTDSVCSPSSSVASSATPSTSSPVDESRQCRKRSLSPSTTSSTTAPPPPPQ 275
Query: 140 PDRMKNCKP 114
P K KP
Sbjct: 276 PPTKKGMKP 284
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 31.1 bits (67), Expect = 0.83
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +1
Query: 139 GSTVGGGVACGDASSTCAVCVGNCGRASGTTCGPTSPSEEHWEERGCGHSG 291
G GGG CG C G CG G G P GCG G
Sbjct: 76 GGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGG 126
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +1
Query: 139 GSTVGGGVACGDASSTCAVCVGNCGRASGTTCG 237
G GGG CG C G CG G CG
Sbjct: 147 GGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCG 179
>Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical
protein C27H6.1 protein.
Length = 1657
Score = 31.1 bits (67), Expect = 0.83
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = -2
Query: 281 PHPRSSQCSSDGEVGPQVVPEARPQLPTHTAQVEEASPQATPPPTVDP 138
P P +S SS G P P ARP+ P +A+ PPP P
Sbjct: 673 PTPEAS--SSTGTSAPARPPPARPEAPKKDETAVDAAAPPRPPPAARP 718
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 31.1 bits (67), Expect = 0.83
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +1
Query: 139 GSTVGGGVACGDASSTCAVCVGNCGRASGTTCGPTSPSEEH 261
G GGG +CG ++ C G G S + C P + + H
Sbjct: 2136 GGCSGGGNSCGGGCNSGGSCGGGGGGCSSSCCQPQTSATSH 2176
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -1
Query: 579 YVPQQENEVYYPQQPENPIFSPTQATELADPTEKIE 472
YVPQ+ P PE +P+Q + +PT IE
Sbjct: 1812 YVPQETQAPIAPSNPEPVQPNPSQTVSIPEPTGNIE 1847
>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
protein R148.3a protein.
Length = 1115
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Frame = -2
Query: 305 MTSHHPECPHPRSSQCSSDGEVGPQVVPEARP--QLPTHTAQV--EEASPQA--TPPPTV 144
+T+ P P P + + + P PE P Q+P TAQ+ E A P+A P PT
Sbjct: 372 LTTPPPPAPPPPAPAVPEEAQA-PTPAPEEAPEAQIPAETAQIPPENAVPEAPEEPAPTT 430
Query: 143 DP 138
P
Sbjct: 431 TP 432
>AC006696-8|AAF39989.1| 120|Caenorhabditis elegans Hypothetical
protein W08E12.2 protein.
Length = 120
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = +1
Query: 136 SGSTVGGGVACGDASSTCAVCVG-NCGRASGTTCGP 240
S GGG G C C G NCG +G CGP
Sbjct: 17 SAQCFGGGCGGGCFGGNCGGCSGNNCG-CNGNNCGP 51
>AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical
protein R148.3b protein.
Length = 1130
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Frame = -2
Query: 290 PECPHPRSSQCSSDGEVGPQVVPEARP--QLPTHTAQV--EEASPQA--TPPPTVDP 138
P P P + + + P PE P Q+P TAQ+ E A P+A P PT P
Sbjct: 389 PPAPPPPAPAVPEEAQA-PTPAPEEAPEAQIPAETAQIPPENAVPEAPEEPAPTTTP 444
>U97196-12|AAB52456.2| 564|Caenorhabditis elegans Hypothetical
protein B0207.1 protein.
Length = 564
Score = 28.7 bits (61), Expect = 4.4
Identities = 21/76 (27%), Positives = 28/76 (36%), Gaps = 1/76 (1%)
Frame = -1
Query: 717 NPXYNPRAVGGGMAAFMYRQPEAAQAPSTGQVYIPDRRRQT-LADTXYVPQQENEVYYPQ 541
NP NP + G+ P Q P V P R + PQ + PQ
Sbjct: 63 NPVQNPNKLSTGLPPMTMMLPPTVQEPLPTPVKTPPLPRPPGNLNPVQQPQIPVQRTPPQ 122
Query: 540 QPENPIFSPTQATELA 493
P P+ P Q T++A
Sbjct: 123 CPPPPVPHPPQITQMA 138
>Z83223-4|CAB05716.2| 534|Caenorhabditis elegans Hypothetical
protein E01G4.4 protein.
Length = 534
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = -1
Query: 663 RQPEAAQAPSTGQVYIPDRRRQTLADTXYVPQQENEVYYPQQPEN 529
+Q + P Y P R++Q Y P+Q+ + Y QQ +N
Sbjct: 39 QQQQQQGRPQQYAGYPPQRQQQQYNMNAYAPRQQQQQQYQQQQQN 83
>Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical
protein B0393.4 protein.
Length = 803
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -2
Query: 224 PEARPQLPTHTAQVEEASPQATPPP 150
P P L T T +E+ P TPPP
Sbjct: 191 PSEPPLLTTPTTPIEDPEPYVTPPP 215
>L13200-7|AAA28189.1| 206|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 96
protein.
Length = 206
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 573 PQQENEVYYPQQPENPIFSPTQATELA 493
PQQ+ Y PQQP +PI A +A
Sbjct: 6 PQQQQPGYQPQQPSHPIVGAGAAPTMA 32
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = -1
Query: 657 PEAAQAPSTGQVYIPDRRRQTLADTXYVPQQENEVYYPQQPENPIFSPT 511
P++ QAPS +Q A T +PQ + P QP + I PT
Sbjct: 121 PQSVQAPSATPAGPLQAMQQAPAPTPGIPQMNQGAHLPPQP-HQIHQPT 168
>U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated
protein 68 protein.
Length = 5079
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -2
Query: 236 PQVVPEARPQLPTHTAQVEEASPQATPPPT 147
P VP RP+ P + E+ Q T PPT
Sbjct: 4536 PDFVPPERPETPETVLEEEKPLNQETSPPT 4565
>U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical
protein F35A5.4 protein.
Length = 524
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -2
Query: 227 VPEARPQ-LPTHTAQVEEASPQATPPPTVDPDRMKNCKP 114
+P+ P+ LPT Q++ + P P P D M +C P
Sbjct: 234 IPQCMPRCLPTCIQQIQISVPLPPPAPRCDSMCMPSCSP 272
>D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine receptor
protein.
Length = 5071
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -2
Query: 236 PQVVPEARPQLPTHTAQVEEASPQATPPPT 147
P VP RP+ P + E+ Q T PPT
Sbjct: 4528 PDFVPPERPETPETVLEEEKPLNQETSPPT 4557
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,834,889
Number of Sequences: 27780
Number of extensions: 312263
Number of successful extensions: 1405
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1397
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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