Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_pT_I24
         (758 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024818-1|AAK29945.2|  375|Caenorhabditis elegans Hypothetical ...    77   1e-14
AC024781-3|AAK39330.2| 2203|Caenorhabditis elegans Prion-like-(q...    32   0.51 
Z81062-13|CAB82210.1|  333|Caenorhabditis elegans Hypothetical p...    29   3.6  
AF016669-3|AAB66097.1|  275|Caenorhabditis elegans Hypothetical ...    29   3.6  
U41014-4|AAK32946.3|  557|Caenorhabditis elegans Hypothetical pr...    29   4.7  
AL021487-8|CAB76733.1|  320|Caenorhabditis elegans Hypothetical ...    29   4.7  
AC006617-1|AAF39770.2|  397|Caenorhabditis elegans Hypothetical ...    29   4.7  
U53139-4|AAK18931.2|  369|Caenorhabditis elegans Serpentine rece...    28   6.3  
U28737-8|ABA61869.1|  537|Caenorhabditis elegans Hypothetical pr...    28   6.3  
U28737-7|ABA61870.1|  501|Caenorhabditis elegans Hypothetical pr...    28   6.3  

>AC024818-1|AAK29945.2|  375|Caenorhabditis elegans Hypothetical
           protein Y54H5A.2 protein.
          Length = 375

 Score = 77.0 bits (181), Expect = 1e-14
 Identities = 61/178 (34%), Positives = 95/178 (53%), Gaps = 18/178 (10%)
 Frame = -1

Query: 545 EENPHVPLIKLIPF-CNY----DVSNIRKGGAIGTIRNISFDTDYHEFLVSPDLDLLTYI 381
           E +P    +KL+P  C      + + IR+  A   +RN++FD   H  L+    + L  I
Sbjct: 186 ESSPPSTTMKLLPIVCELLTTAETTEIRECAA-DVLRNLAFDDSLHGSLLDTSDEYLCSI 244

Query: 380 LYPLMG-NEDYPDDEMETLPVTLQYLPKEKRREPDIDIRILILETLNKLCAQRRGRQYLR 204
           L PLM  N++  ++E+  LPV LQY  KE R   DI +R  ++E L +LCA + GR+ LR
Sbjct: 245 LAPLMDVNDNLDEEEIAKLPVRLQYYEKE-RDSSDI-VRQKLIEALFQLCATKHGREVLR 302

Query: 203 ENGVYYIMREYHKW-----EKDPKALIACEN------VVDILIQKEDEVGAE-DLSTV 66
             GVY  MRE  K      +K  K L++ +       ++ ILI+ E E+  + +LS++
Sbjct: 303 AKGVYPAMRELDKGTETAEDKHKKTLLSSQQEHTLHALIGILIRYESEMDVDPELSSI 360


>AC024781-3|AAK39330.2| 2203|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 85
           protein.
          Length = 2203

 Score = 31.9 bits (69), Expect = 0.51
 Identities = 21/83 (25%), Positives = 43/83 (51%)
 Frame = -1

Query: 287 EPDIDIRILILETLNKLCAQRRGRQYLRENGVYYIMREYHKWEKDPKALIACENVVDILI 108
           +PD+ I + ILE L +  A+ R    L+  G   +++     +++ +  I+ +N   +L+
Sbjct: 737 DPDLRIELYILEELRRGSARLRENHALQAVGADKLLKLVAMLDRNIRDAISADN-QRLLV 795

Query: 107 QKEDEVGAEDLSTVEVPEELRER 39
             +D+V   D+   E+ EE  +R
Sbjct: 796 PCDDDVDVGDVLEKEICEERVKR 818


>Z81062-13|CAB82210.1|  333|Caenorhabditis elegans Hypothetical
           protein F15A4.13 protein.
          Length = 333

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 11/38 (28%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
 Frame = +2

Query: 182 LYSTLRSRVNTVCLYVEHTI-CSVSPVSEYVCLYQALS 292
           +YST  ++  T+ +  + TI   +SP+++++CL++ L+
Sbjct: 42  MYSTTSNKQKTIRIEFDDTIQFDLSPITKHICLFELLA 79


>AF016669-3|AAB66097.1|  275|Caenorhabditis elegans Hypothetical
           protein K10G6.2 protein.
          Length = 275

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = +3

Query: 357 FVAH*GIQNVCKQIQVRAH*ELVVVCVE*YITYCTDRTTLPYVGHI 494
           FV H   ++ C+   +  + E V +  E Y TYC+DR   P + HI
Sbjct: 61  FVNH--YRHYCRSSNIATYNEEVRIICERYRTYCSDR-VYPSINHI 103


>U41014-4|AAK32946.3|  557|Caenorhabditis elegans Hypothetical
           protein C06G1.5 protein.
          Length = 557

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -1

Query: 482 IRKGGAIGTIRNISFDTDYHEFL 414
           +RKGG +  IRN+ FD D ++ L
Sbjct: 298 LRKGGVLQAIRNLQFDDDINKSL 320


>AL021487-8|CAB76733.1|  320|Caenorhabditis elegans Hypothetical
           protein Y45F10B.14 protein.
          Length = 320

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
 Frame = +3

Query: 24  IGFIESFPQFLRYFYC*QVLRTDLVFLLNQYIHYILTRYQSFRV-FFPFMIFSHYIVHSV 200
           + F +    FL +F   +++ T   F +  YI     +Y  +RV FF   + +H+IVHS 
Sbjct: 47  LAFTDCCSAFLNFFVQQRMIPT--AFTIG-YISNGFCKYFGYRVCFFSHNLMAHFIVHSN 103

Query: 201 LA*ILS 218
            + +LS
Sbjct: 104 YSLVLS 109


>AC006617-1|AAF39770.2|  397|Caenorhabditis elegans Hypothetical
           protein C39B5.6 protein.
          Length = 397

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -1

Query: 182 MREYHKWEKDPKALIACENVVDILIQKEDEVGAEDLSTVEVPEE 51
           ++ + KW K+ +  + CE   D  + +ED VG +  S V + EE
Sbjct: 196 LKIHGKWLKEVEEELKCEGKADFEVLRED-VGFDARSAVHIAEE 238


>U53139-4|AAK18931.2|  369|Caenorhabditis elegans Serpentine
           receptor, class w protein67 protein.
          Length = 369

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
 Frame = +2

Query: 431 LCRMIY-YVLYRSHHPSVCWTHHSYRTVLILLTVH--GDSLRRATS 559
           LC  I+ Y L        CW +HSY  V I + V    D LRRA++
Sbjct: 82  LCLFIHAYTLTLIFPDDRCWNYHSYINVFIEVWVSSLNDVLRRASA 127


>U28737-8|ABA61869.1|  537|Caenorhabditis elegans Hypothetical
           protein F14B8.5a protein.
          Length = 537

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 17/62 (27%), Positives = 32/62 (51%)
 Frame = -1

Query: 737 MTLSNITRLEDELEVCLXTFIPHLNDIMNAFVNTEFNKTGSNLHYLAPMFSNLACSHRIR 558
           +TL+  T L+ +L++ L   +  +N+ M    +   NKT +  ++L   FSN   +  + 
Sbjct: 286 LTLTG-TSLQTQLQMNLN--VQCINNFMGPLCDLTCNKTNAQANHLVACFSNRTGTFSLC 342

Query: 557 KW 552
           KW
Sbjct: 343 KW 344


>U28737-7|ABA61870.1|  501|Caenorhabditis elegans Hypothetical
           protein F14B8.5b protein.
          Length = 501

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 17/62 (27%), Positives = 32/62 (51%)
 Frame = -1

Query: 737 MTLSNITRLEDELEVCLXTFIPHLNDIMNAFVNTEFNKTGSNLHYLAPMFSNLACSHRIR 558
           +TL+  T L+ +L++ L   +  +N+ M    +   NKT +  ++L   FSN   +  + 
Sbjct: 250 LTLTG-TSLQTQLQMNLN--VQCINNFMGPLCDLTCNKTNAQANHLVACFSNRTGTFSLC 306

Query: 557 KW 552
           KW
Sbjct: 307 KW 308


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,985,095
Number of Sequences: 27780
Number of extensions: 415783
Number of successful extensions: 1122
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1072
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1120
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)