Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_pT_I19
         (757 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    23   2.3  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   3.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   3.1  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   4.1  
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    22   7.1  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    22   7.1  

>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = +1

Query: 385 LCSEETTIYGQFYTINHTRSFTQEENHRIYY 477
           + ++    YG  Y  NHT S  + +    YY
Sbjct: 1   MANQTANYYGDVYQWNHTVSSGERDTRTEYY 31


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 476 TSDISPNLPSGILESISXAFIGSDQPT 556
           +S  SP+ PS    S+S   +GS+  T
Sbjct: 88  SSSPSPSSPSSFFSSVSPTSLGSENYT 114


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +2

Query: 470 FTTSDISPNLPSGILESISXAFIGSDQPT 556
           F T+  SP    G+LE  S AF G+  PT
Sbjct: 911 FATAASSP----GLLERASPAFSGTSSPT 935


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 308 VNCNNISKYIKPYNSQVFXYD 370
           VN N  SKY++ YN   +  D
Sbjct: 202 VNTNYSSKYMREYNDPEYKLD 222


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/19 (42%), Positives = 12/19 (63%), Gaps = 3/19 (15%)
 Frame = +3

Query: 648 HPK---QLLKHCRWCGLSE 695
           HP+   +L K C+W G+ E
Sbjct: 340 HPRYRQELQKRCKWMGIHE 358


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/19 (42%), Positives = 12/19 (63%), Gaps = 3/19 (15%)
 Frame = +3

Query: 648 HPK---QLLKHCRWCGLSE 695
           HP+   +L K C+W G+ E
Sbjct: 340 HPRYRQELQKRCKWMGIHE 358


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,331
Number of Sequences: 438
Number of extensions: 3419
Number of successful extensions: 17
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23753925
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)