Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_pT_I18
         (756 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1523 - 34148407-34150224                                         29   3.0  
10_08_0438 + 17919355-17919391,17919491-17919544,17919928-179201...    29   4.0  

>04_04_1523 - 34148407-34150224
          Length = 605

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +3

Query: 507 LNGGYPPHQAIQWVSLKIIKIQQFV 581
           +NGG P H   Q VS KI   QQF+
Sbjct: 247 VNGGSPAHDQKQQVSSKIASFQQFI 271


>10_08_0438 +
           17919355-17919391,17919491-17919544,17919928-17920186,
           17920396-17920484,17920645-17920775,17920900-17920946,
           17921029-17921137,17921217-17921303,17921521-17921692,
           17921837-17922309,17922402-17922463,17922537-17922639,
           17923535-17923636
          Length = 574

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +2

Query: 278 CLYNYRFIISETNTKYKLKLGHGLNSLYNNRNDKYIHTD 394
           CL  Y FI+  +    K K G  L++L  +   KY+H D
Sbjct: 229 CLAGYTFILGSSE---KYKFGDKLHALLESTGAKYLHVD 264


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,874,980
Number of Sequences: 37544
Number of extensions: 344900
Number of successful extensions: 617
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 617
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2016060588
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)