Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_pT_I18
(756 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 2.3
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 23 3.1
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 23 4.1
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 22 5.4
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 22 5.4
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 22 7.1
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 22 7.1
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 22 7.1
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 22 7.1
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 21 9.4
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 21 9.4
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 9.4
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 23.4 bits (48), Expect = 2.3
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 299 IISETNTKYKLKLGHGLNSLYNNRNDKYIHTDLNFHQ*CYY 421
IIS + YK + N+ YNN N+ Y + N ++ YY
Sbjct: 314 IISSLSNNYKYSNYNNYNNNYNNYNN-YNNNYNNNYKKLYY 353
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.0 bits (47), Expect = 3.1
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +2
Query: 341 HGLNSLYNNRNDKYIHTDLNFHQ*CYY 421
H N+ N N+KY + + N+++ YY
Sbjct: 91 HNNNNYKYNYNNKYNYNNNNYNKKLYY 117
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.6 bits (46), Expect = 4.1
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +2
Query: 299 IISETNTKYKLKLGHGLNSLYNNRNDKYIHTDLNF 403
IIS + Y + N+ YNN N K ++ ++N+
Sbjct: 81 IISSLSNNYNYSNYNNYNNNYNNYNKK-LYYNINY 114
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.2 bits (45), Expect = 5.4
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +2
Query: 350 NSLYNNRNDKYIHTDLNF 403
N+ YNN N K ++ ++N+
Sbjct: 315 NNYYNNNNYKKLYYNINY 332
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.2 bits (45), Expect = 5.4
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = +2
Query: 350 NSLYNNRNDKYIHTDLNF 403
N+ YNN N+K ++ ++N+
Sbjct: 315 NNNYNNYNNKKLYYNINY 332
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 7.1
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +2
Query: 350 NSLYNNRNDKYIHTDLNFHQ*CYY 421
N+ +N N KY + + N+++ YY
Sbjct: 87 NNTIHNNNYKYNYNNNNYNKKLYY 110
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 7.1
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +2
Query: 350 NSLYNNRNDKYIHTDLNFHQ*CYY 421
N+ +N N KY + + N+++ YY
Sbjct: 87 NNTIHNNNYKYNYNNNNYNKKLYY 110
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 7.1
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +2
Query: 350 NSLYNNRNDKYIHTDLNFHQ*CYY 421
N+ +N N KY + + N+++ YY
Sbjct: 87 NNTIHNNNYKYNYNNNNYNKKLYY 110
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 7.1
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +2
Query: 350 NSLYNNRNDKYIHTDLNFHQ*CYY 421
N+ +N N KY + + N+++ YY
Sbjct: 87 NNTIHNNNYKYNYNNNNYNKKLYY 110
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/34 (26%), Positives = 21/34 (61%)
Frame = +2
Query: 530 SGNTVGFIKNNKNSTICLRCMIPHIYRIHANTID 631
S NT+ ++ +NKN+ I + +R+ ++T++
Sbjct: 197 STNTMVYMVDNKNTLIIYQNADDSFHRLSSHTLN 230
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 21.4 bits (43), Expect = 9.4
Identities = 7/15 (46%), Positives = 8/15 (53%)
Frame = +2
Query: 362 NNRNDKYIHTDLNFH 406
NNRND +H H
Sbjct: 530 NNRNDNQVHHSSKLH 544
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.4 bits (43), Expect = 9.4
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +2
Query: 299 IISETNTKYKLKLGHGLNSLYNNRNDKYIHTDLNFHQ*CYY 421
IIS + K + N+ YNN + Y + + N ++ YY
Sbjct: 314 IISSLSNKTIHNNNNYNNNNYNNNYNNYNNNNYNNYKKLYY 354
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,198
Number of Sequences: 438
Number of extensions: 4805
Number of successful extensions: 24
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23753925
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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