Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_pT_I10
         (803 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0682 + 20018879-20019226,20019324-20019656                       30   2.5  
07_03_1567 - 27772815-27773302,27773471-27773561,27773641-277739...    28   10.0 

>08_02_0682 + 20018879-20019226,20019324-20019656
          Length = 226

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -2

Query: 643 PPLRSDRISRLVAVLGSRWSFSALSILXSSKMCLR 539
           PP +  R++ L A+LG+ W  SAL I  ++  C R
Sbjct: 41  PPPQGRRLTALHALLGALWVASALYIANAAARCAR 75


>07_03_1567 - 27772815-27773302,27773471-27773561,27773641-27773988,
            27774929-27775110,27775191-27775368,27775453-27775605,
            27775993-27776232,27776369-27776449,27776485-27776730,
            27777151-27777240,27777536-27777778,27778365-27778529,
            27779017-27779080,27779162-27779286,27779383-27779476,
            27779647-27779714,27779798-27779989,27780618-27780752,
            27780847-27780934,27781014-27781107,27781484-27781547,
            27781657-27781708,27781911-27782014,27782099-27782158,
            27782687-27782770,27782892-27783125,27783442-27783864,
            27784675-27784736,27784867-27785521
          Length = 1700

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = +1

Query: 286  LEDTILKFPKIKLHFXIVRYLVYISNKLGPKQINRRHNYSLFRFICGSSKLWLY 447
            L++T +  PK K+   I +YL  I NK+G        +Y   R    + +LW Y
Sbjct: 1497 LQNTSVNLPKEKVLSRIRKYLQIIGNKIGEIVDQHSESYKQSRM---AMRLWNY 1547


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,721,664
Number of Sequences: 37544
Number of extensions: 309090
Number of successful extensions: 459
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 459
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)