Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_pT_I07
         (756 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC091491-1|AAH91491.1|  329|Homo sapiens chromosome 19 open read...   125   2e-28
BC006244-1|AAH06244.1|  329|Homo sapiens HSPC142 protein protein.     125   2e-28
BC000788-1|AAH00788.1|  329|Homo sapiens HSPC142 protein protein.     125   2e-28
AK000578-1|BAA91268.1|  329|Homo sapiens protein ( Homo sapiens ...   125   2e-28
CR533526-1|CAG38557.1|  329|Homo sapiens HSPC142 protein.             120   6e-27

>BC091491-1|AAH91491.1|  329|Homo sapiens chromosome 19 open reading
           frame 62 protein.
          Length = 329

 Score =  125 bits (301), Expect = 2e-28
 Identities = 72/224 (32%), Positives = 124/224 (55%), Gaps = 6/224 (2%)
 Frame = -1

Query: 753 IVCLDVCYDNPNSLYRFGDGTTFSPINMLKRILDFFFHTKHAISKKTEFALITLQDAGAC 574
           I+CLD+  +         +G+  + +N+ +++++ F  TKH I K  EFAL+ + D  A 
Sbjct: 96  IICLDLSEEMSLPKLESFNGSKTNALNVSQKMIEMFVRTKHKIDKSHEFALVVVNDDTA- 154

Query: 573 WTQNFTSNVKDLISAIDYAHAEEATSDTFDFEKVYELIRHHIEIPMMKPGESLLPPPYIV 394
           W    TS+ ++L S +     E A+  TF+ E ++ LI+   E+P+ +  +++ PPPY+V
Sbjct: 155 WLSGLTSDPRELCSCL--YDLETASCSTFNLEGLFSLIQQKTELPVTENVQTI-PPPYVV 211

Query: 393 RLLILYGRSNCVPVIPHEDPCFQYIRSQIYFYTDILLAH---EDDCATHKCDEIYDALQD 223
           R +++Y R  C P     +P  +  +   YF+ D++  H   E+        +++  +  
Sbjct: 212 RTILVYSRPPCQPQFSLTEPMKKMFQCP-YFFFDVVYIHNGTEEKEEEMSWKDMFAFMGS 270

Query: 222 LDN-GYSYVFEVSRN--ATKIHDCIAKLLAHPLQRPLQQNTDYS 100
           LD  G SY +EV+    A ++H+C+AKLLAHPLQRP Q +  YS
Sbjct: 271 LDTKGTSYKYEVALAGPALELHNCMAKLLAHPLQRPCQSHASYS 314


>BC006244-1|AAH06244.1|  329|Homo sapiens HSPC142 protein protein.
          Length = 329

 Score =  125 bits (301), Expect = 2e-28
 Identities = 72/224 (32%), Positives = 124/224 (55%), Gaps = 6/224 (2%)
 Frame = -1

Query: 753 IVCLDVCYDNPNSLYRFGDGTTFSPINMLKRILDFFFHTKHAISKKTEFALITLQDAGAC 574
           I+CLD+  +         +G+  + +N+ +++++ F  TKH I K  EFAL+ + D  A 
Sbjct: 96  IICLDLSEEMSLPKLESFNGSKTNALNVSQKMIEMFVRTKHKIDKSHEFALVVVNDDTA- 154

Query: 573 WTQNFTSNVKDLISAIDYAHAEEATSDTFDFEKVYELIRHHIEIPMMKPGESLLPPPYIV 394
           W    TS+ ++L S +     E A+  TF+ E ++ LI+   E+P+ +  +++ PPPY+V
Sbjct: 155 WLSGLTSDPRELCSCL--YDLETASCSTFNLEGLFSLIQQKTELPVTENVQTI-PPPYVV 211

Query: 393 RLLILYGRSNCVPVIPHEDPCFQYIRSQIYFYTDILLAH---EDDCATHKCDEIYDALQD 223
           R +++Y R  C P     +P  +  +   YF+ D++  H   E+        +++  +  
Sbjct: 212 RTILVYSRPPCQPQFSLTEPMKKMFQCP-YFFFDVVYIHNGTEEKEEEMSWKDMFAFMGS 270

Query: 222 LDN-GYSYVFEVSRN--ATKIHDCIAKLLAHPLQRPLQQNTDYS 100
           LD  G SY +EV+    A ++H+C+AKLLAHPLQRP Q +  YS
Sbjct: 271 LDTKGTSYKYEVALAGPALELHNCMAKLLAHPLQRPCQSHASYS 314


>BC000788-1|AAH00788.1|  329|Homo sapiens HSPC142 protein protein.
          Length = 329

 Score =  125 bits (301), Expect = 2e-28
 Identities = 72/224 (32%), Positives = 124/224 (55%), Gaps = 6/224 (2%)
 Frame = -1

Query: 753 IVCLDVCYDNPNSLYRFGDGTTFSPINMLKRILDFFFHTKHAISKKTEFALITLQDAGAC 574
           I+CLD+  +         +G+  + +N+ +++++ F  TKH I K  EFAL+ + D  A 
Sbjct: 96  IICLDLSEEMSLPKLESFNGSKTNALNVSQKMIEMFVRTKHKIDKSHEFALVVVNDDTA- 154

Query: 573 WTQNFTSNVKDLISAIDYAHAEEATSDTFDFEKVYELIRHHIEIPMMKPGESLLPPPYIV 394
           W    TS+ ++L S +     E A+  TF+ E ++ LI+   E+P+ +  +++ PPPY+V
Sbjct: 155 WLSGLTSDPRELCSCL--YDLETASCSTFNLEGLFSLIQQKTELPVTENVQTI-PPPYVV 211

Query: 393 RLLILYGRSNCVPVIPHEDPCFQYIRSQIYFYTDILLAH---EDDCATHKCDEIYDALQD 223
           R +++Y R  C P     +P  +  +   YF+ D++  H   E+        +++  +  
Sbjct: 212 RTILVYSRPPCQPQFSLTEPMKKMFQCP-YFFFDVVYIHNGTEEKEEEMSWKDMFAFMGS 270

Query: 222 LDN-GYSYVFEVSRN--ATKIHDCIAKLLAHPLQRPLQQNTDYS 100
           LD  G SY +EV+    A ++H+C+AKLLAHPLQRP Q +  YS
Sbjct: 271 LDTKGTSYKYEVALAGPALELHNCMAKLLAHPLQRPCQSHASYS 314


>AK000578-1|BAA91268.1|  329|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20571 fis, clone REC01040. ).
          Length = 329

 Score =  125 bits (301), Expect = 2e-28
 Identities = 72/224 (32%), Positives = 124/224 (55%), Gaps = 6/224 (2%)
 Frame = -1

Query: 753 IVCLDVCYDNPNSLYRFGDGTTFSPINMLKRILDFFFHTKHAISKKTEFALITLQDAGAC 574
           I+CLD+  +         +G+  + +N+ +++++ F  TKH I K  EFAL+ + D  A 
Sbjct: 96  IICLDLSEEMSLPKLESFNGSKTNALNVSQKMIEMFVRTKHKIDKSHEFALVVVNDDTA- 154

Query: 573 WTQNFTSNVKDLISAIDYAHAEEATSDTFDFEKVYELIRHHIEIPMMKPGESLLPPPYIV 394
           W    TS+ ++L S +     E A+  TF+ E ++ LI+   E+P+ +  +++ PPPY+V
Sbjct: 155 WLSGLTSDPRELCSCL--YDLETASCSTFNLEGLFSLIQQKTELPVTENVQTI-PPPYVV 211

Query: 393 RLLILYGRSNCVPVIPHEDPCFQYIRSQIYFYTDILLAH---EDDCATHKCDEIYDALQD 223
           R +++Y R  C P     +P  +  +   YF+ D++  H   E+        +++  +  
Sbjct: 212 RTILVYSRPPCQPQFSLTEPMKKMFQCP-YFFFDVVYIHNGTEEKEEEMSWKDMFAFMGS 270

Query: 222 LDN-GYSYVFEVSRN--ATKIHDCIAKLLAHPLQRPLQQNTDYS 100
           LD  G SY +EV+    A ++H+C+AKLLAHPLQRP Q +  YS
Sbjct: 271 LDTKGTSYKYEVALAGPALELHNCMAKLLAHPLQRPCQSHASYS 314


>CR533526-1|CAG38557.1|  329|Homo sapiens HSPC142 protein.
          Length = 329

 Score =  120 bits (289), Expect = 6e-27
 Identities = 70/224 (31%), Positives = 122/224 (54%), Gaps = 6/224 (2%)
 Frame = -1

Query: 753 IVCLDVCYDNPNSLYRFGDGTTFSPINMLKRILDFFFHTKHAISKKTEFALITLQDAGAC 574
           I+CLD+  +         +G+  + +N+ +++++ F  TKH I K  EFAL+ + D  A 
Sbjct: 96  IICLDLSEEMSLPKLESFNGSKTNALNVSQKMIEMFVRTKHKIDKSHEFALVVVNDDTA- 154

Query: 573 WTQNFTSNVKDLISAIDYAHAEEATSDTFDFEKVYELIRHHIEIPMMKPGESLLPPPYIV 394
           W    TS+ ++L S +     E A+  TF+ E ++ LI+   E+P+ +  +++ PPPY+V
Sbjct: 155 WLSGLTSDPRELCSCL--YDLETASCSTFNLEGLFSLIQQKTELPVTENVQTI-PPPYVV 211

Query: 393 RLLILYGRSNCVPVIPHEDPCFQYIRSQIYFYTDILLAH---EDDCATHKCDEIYDALQD 223
           R +++Y R  C P     +P  +  +   YF+ D++  H   E+        +++  +  
Sbjct: 212 RTILVYSRPPCQPQFSLTEPMKKMFQCP-YFFFDVVYIHNGTEEKEEEMSWKDMFAFMGS 270

Query: 222 LDN-GYSYVFEVSRNAT--KIHDCIAKLLAHPLQRPLQQNTDYS 100
           LD  G SY +EV+      ++H+C+AKLLAH LQRP Q +  YS
Sbjct: 271 LDTKGTSYKYEVALAGPVLELHNCMAKLLAHSLQRPCQSHASYS 314


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,715,195
Number of Sequences: 237096
Number of extensions: 2102257
Number of successful extensions: 5176
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5141
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9127122082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)