Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_pT_I07
(756 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006605-4|AAK85441.2| 1378|Caenorhabditis elegans Hypothetical ... 29 2.7
Z92811-2|CAI46583.1| 299|Caenorhabditis elegans Hypothetical pr... 29 3.6
U70858-7|AAB09177.1| 1484|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z92782-12|CAH60765.1| 328|Caenorhabditis elegans Hypothetical p... 28 6.2
Z73976-2|CAA98285.1| 360|Caenorhabditis elegans Hypothetical pr... 28 6.2
U29537-6|AAO38648.1| 340|Caenorhabditis elegans Egg laying defe... 28 6.2
U29537-5|AAO38650.1| 414|Caenorhabditis elegans Egg laying defe... 28 6.2
U29537-4|AAO38647.1| 450|Caenorhabditis elegans Egg laying defe... 28 6.2
U29537-3|AAO38646.1| 457|Caenorhabditis elegans Egg laying defe... 28 6.2
U29537-2|AAK31508.1| 465|Caenorhabditis elegans Egg laying defe... 28 6.2
U40423-4|AAA81453.2| 243|Caenorhabditis elegans Hypothetical pr... 28 8.2
>AC006605-4|AAK85441.2| 1378|Caenorhabditis elegans Hypothetical
protein C07H6.3 protein.
Length = 1378
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 693 TTFSPINMLKRILDFFFHTKHAISKKTEFALI 598
TTF P LK + DF H +S K+ AL+
Sbjct: 938 TTFDPTFQLKAVCDFMCDPVHLLSPKSRLALL 969
>Z92811-2|CAI46583.1| 299|Caenorhabditis elegans Hypothetical
protein T01G1.4 protein.
Length = 299
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = -1
Query: 687 FSPINMLKRILDFFFHTKHAISKKTEFALITLQDAGACWTQNFTSNVKDLIS 532
F N+ K IL++ ++ + ++K T + D W NF+ N +DLIS
Sbjct: 248 FGYFNLCKAILNYQYY-RTTVTKMTSSKVS--DDNATSWKMNFSGNDRDLIS 296
>U70858-7|AAB09177.1| 1484|Caenorhabditis elegans Hypothetical
protein T01C4.1 protein.
Length = 1484
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +2
Query: 128 LCSGCANNFAIQSCILVAFLDTSNT*E*PLSRSCNASYISSHLCVAQSSSCANRISV 298
+CS A SC ++ N E + +C+A + +CV++ SC +RI +
Sbjct: 182 ICSEYATVTPGSSCYTISASYGLNLAELQTTYNCDALQVDDTICVSKKFSCQHRIEI 238
>Z92782-12|CAH60765.1| 328|Caenorhabditis elegans Hypothetical
protein F14F8.13 protein.
Length = 328
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = -2
Query: 302 FIQIFCWHMKMIVLRINVMKYMMHYRILIMAILMCLRY 189
FI I+C+ +I ++V++ H + ++AIL L+Y
Sbjct: 98 FIFIYCFSFFIIFYILHVLQQTFHVILFLLAILNSLKY 135
>Z73976-2|CAA98285.1| 360|Caenorhabditis elegans Hypothetical
protein T07C12.6 protein.
Length = 360
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/53 (22%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = -2
Query: 305 IFIQIFCWHMKMIVLRINVMKYMMHYRILIMAILMC-LRYQEMLLKYMIVLQN 150
+ F +++ + L++ + + HY +I++I M L Y+ ++ K +++L N
Sbjct: 37 LIFYFFAFYINSVCLKVYLKIQLFHYNFIILSIPMFGLWYEAIIGKMIVMLYN 89
>U29537-6|AAO38648.1| 340|Caenorhabditis elegans Egg laying
defective protein 44,isoform d protein.
Length = 340
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -3
Query: 703 W*WHNIFSNQYVETNT*FLFS-YKTCNQ 623
W +HN+FSN + T LFS Y CN+
Sbjct: 123 WIYHNLFSNNPLPTKQFHLFSAYVKCNK 150
>U29537-5|AAO38650.1| 414|Caenorhabditis elegans Egg laying
defective protein 44,isoform f protein.
Length = 414
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -3
Query: 703 W*WHNIFSNQYVETNT*FLFS-YKTCNQ 623
W +HN+FSN + T LFS Y CN+
Sbjct: 197 WIYHNLFSNNPLPTKQFHLFSAYVKCNK 224
>U29537-4|AAO38647.1| 450|Caenorhabditis elegans Egg laying
defective protein 44,isoform c protein.
Length = 450
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -3
Query: 703 W*WHNIFSNQYVETNT*FLFS-YKTCNQ 623
W +HN+FSN + T LFS Y CN+
Sbjct: 233 WIYHNLFSNNPLPTKQFHLFSAYVKCNK 260
>U29537-3|AAO38646.1| 457|Caenorhabditis elegans Egg laying
defective protein 44,isoform b protein.
Length = 457
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -3
Query: 703 W*WHNIFSNQYVETNT*FLFS-YKTCNQ 623
W +HN+FSN + T LFS Y CN+
Sbjct: 240 WIYHNLFSNNPLPTKQFHLFSAYVKCNK 267
>U29537-2|AAK31508.1| 465|Caenorhabditis elegans Egg laying
defective protein 44,isoform a protein.
Length = 465
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -3
Query: 703 W*WHNIFSNQYVETNT*FLFS-YKTCNQ 623
W +HN+FSN + T LFS Y CN+
Sbjct: 248 WIYHNLFSNNPLPTKQFHLFSAYVKCNK 275
>U40423-4|AAA81453.2| 243|Caenorhabditis elegans Hypothetical
protein C24H10.1 protein.
Length = 243
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +2
Query: 107 SVFCCKGLCSGCANNFAIQSCILVAF 184
S+ C G+C+ C++ FA+ ILVAF
Sbjct: 131 SLLC--GICAPCSSGFAVLYAILVAF 154
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,115,924
Number of Sequences: 27780
Number of extensions: 383131
Number of successful extensions: 982
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 981
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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